RNA–Protein interactions for RNA: ENST00000460097.5

CMTM3-203, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 2 BASIC

Gene CMTM3, Length 1,797 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-203ENST00000460097 GUCY1A2P33402 732 aa17.76■□□□□ 0.43
CMTM3-203ENST00000460097 TM4SF4P48230 202 aa17.76■□□□□ 0.43
CMTM3-203ENST00000460097 MAP2K1Q02750 393 aaPredicted RBP17.76■□□□□ 0.43
CMTM3-203ENST00000460097 SPP2Q13103 211 aa17.76■□□□□ 0.43
CMTM3-203ENST00000460097 SEPT2Q15019 361 aa17.76■□□□□ 0.43
CMTM3-203ENST00000460097 PTPAQ15257 358 aa17.76■□□□□ 0.43
CMTM3-203ENST00000460097 MB21D2Q8IYB1 491 aaPredicted RBP17.76■□□□□ 0.43
CMTM3-203ENST00000460097 TC2NQ8N9U0 490 aa17.76■□□□□ 0.43
CMTM3-203ENST00000460097 MLKLQ8NB16 471 aa17.76■□□□□ 0.43
CMTM3-203ENST00000460097 WDR24Q96S15 920 aa17.76■□□□□ 0.43
CMTM3-203ENST00000460097 GBP3Q9H0R5 595 aa17.76■□□□□ 0.43
CMTM3-203ENST00000460097 RNF41Q9H4P4 317 aaPredicted RBP17.76■□□□□ 0.43
CMTM3-203ENST00000460097 INTS13Q9NVM9 706 aa17.76■□□□□ 0.43
CMTM3-203ENST00000460097 DDX52Q9Y2R4 599 aaKnown RBP eCLIP17.76■□□□□ 0.43
CMTM3-203ENST00000460097 LAMB1P07942 1786 aa17.75■□□□□ 0.43
CMTM3-203ENST00000460097 TRIM75PA6NK02 468 aa17.75■□□□□ 0.43
CMTM3-203ENST00000460097 CDKL5O76039 1030 aa17.75■□□□□ 0.43
CMTM3-203ENST00000460097 FGRP09769 529 aa17.75■□□□□ 0.43
CMTM3-203ENST00000460097 PCP11498 1178 aaKnown RBP17.75■□□□□ 0.43
CMTM3-203ENST00000460097 CETPP11597 493 aa17.75■□□□□ 0.43
CMTM3-203ENST00000460097 FOSBP53539 338 aa17.75■□□□□ 0.43
CMTM3-203ENST00000460097 AKNAD1Q5T1N1 836 aa17.75■□□□□ 0.43
CMTM3-203ENST00000460097 MFSD6Q6ZSS7 791 aa17.75■□□□□ 0.43
CMTM3-203ENST00000460097 STAG1Q8WVM7 1258 aa17.75■□□□□ 0.43
CMTM3-203ENST00000460097 TOMM22Q9NS69 142 aa17.75■□□□□ 0.43
CMTM3-203ENST00000460097 TESPA1A2RU30 521 aaPredicted RBP17.74■□□□□ 0.43
CMTM3-203ENST00000460097 NOM1Q5C9Z4 860 aaKnown RBP17.74■□□□□ 0.43
CMTM3-203ENST00000460097 BEND6Q5SZJ8 279 aaPredicted RBP17.74■□□□□ 0.43
CMTM3-203ENST00000460097 SHC4Q6S5L8 630 aa17.74■□□□□ 0.43
CMTM3-203ENST00000460097 NBPF3Q9H094 633 aa17.74■□□□□ 0.43
CMTM3-203ENST00000460097 TACC3Q9Y6A5 838 aa17.74■□□□□ 0.43
CMTM3-203ENST00000460097 CCL15-CCL14A0A0B4J2E2 113 aa17.74■□□□□ 0.43
CMTM3-203ENST00000460097 ORC4O43929 436 aa17.74■□□□□ 0.43
CMTM3-203ENST00000460097 CCDC175P0C221 793 aa17.74■□□□□ 0.43
CMTM3-203ENST00000460097 TSPY3P0CV98 308 aa17.74■□□□□ 0.43
CMTM3-203ENST00000460097 TSPY8P0CW00 308 aa17.74■□□□□ 0.43
CMTM3-203ENST00000460097 TFAP4Q01664 338 aa17.74■□□□□ 0.43
CMTM3-203ENST00000460097 CCL15Q16663 113 aa17.74■□□□□ 0.43
CMTM3-203ENST00000460097 FAM47AQ5JRC9 791 aa17.74■□□□□ 0.43
CMTM3-203ENST00000460097 TBC1D10CQ8IV04 446 aa17.74■□□□□ 0.43
CMTM3-203ENST00000460097 GOLGA6L1Q8N7Z2 621 aa17.74■□□□□ 0.43
CMTM3-203ENST00000460097 MAP3K14Q99558 947 aa17.74■□□□□ 0.43
CMTM3-203ENST00000460097 YY1AP1Q9H869 796 aa17.74■□□□□ 0.43
CMTM3-203ENST00000460097 KANSL2Q9H9L4 492 aa17.74■□□□□ 0.43
CMTM3-203ENST00000460097 FANCLQ9NW38 375 aa17.74■□□□□ 0.43
CMTM3-203ENST00000460097 CDC23Q9UJX2 597 aa17.74■□□□□ 0.43
CMTM3-203ENST00000460097 ATAD5Q96QE3 1844 aa17.73■□□□□ 0.43
CMTM3-203ENST00000460097 A0A0G2JLL6 359 aaPredicted RBP17.73■□□□□ 0.43
CMTM3-203ENST00000460097 KIF28PB7ZC32 967 aa17.73■□□□□ 0.43
CMTM3-203ENST00000460097 USP17L10C9JJH3 530 aa17.73■□□□□ 0.43
CMTM3-203ENST00000460097 CPLX1O14810 134 aa17.73■□□□□ 0.43
CMTM3-203ENST00000460097 RANBP6O60518 1105 aaKnown RBP17.73■□□□□ 0.43
CMTM3-203ENST00000460097 FECHP22830 423 aa17.73■□□□□ 0.43
CMTM3-203ENST00000460097 CHMP4BP1P59074 171 aa17.73■□□□□ 0.43
CMTM3-203ENST00000460097 RRP12Q5JTH9 1297 aaKnown RBP17.73■□□□□ 0.43
CMTM3-203ENST00000460097 LEKR1Q6ZMV7 388 aa17.73■□□□□ 0.43
CMTM3-203ENST00000460097 PRRT2Q7Z6L0 340 aaPredicted RBP17.73■□□□□ 0.43
CMTM3-203ENST00000460097 BRI3BPQ8WY22 251 aa17.73■□□□□ 0.43
CMTM3-203ENST00000460097 GNL3Q9BVP2 549 aaKnown RBP eCLIP17.73■□□□□ 0.43
CMTM3-203ENST00000460097 MYH8P13535 1937 aa17.73■□□□□ 0.43
CMTM3-203ENST00000460097 TSPY2A6NKD2 308 aa17.72■□□□□ 0.43
CMTM3-203ENST00000460097 GOLGA8BA8MQT2 603 aa17.72■□□□□ 0.43
CMTM3-203ENST00000460097 C19orf81C9J6K1 198 aa17.72■□□□□ 0.43
CMTM3-203ENST00000460097 TMEM232C9JQI7 657 aa17.72■□□□□ 0.43
CMTM3-203ENST00000460097 BACE1P56817 501 aa17.72■□□□□ 0.43
CMTM3-203ENST00000460097 MDM2Q00987 491 aaPredicted RBP17.72■□□□□ 0.43
CMTM3-203ENST00000460097 OTUD7BQ6GQQ9 843 aa17.72■□□□□ 0.43
CMTM3-203ENST00000460097 FASTKD5Q7L8L6 764 aaKnown RBP17.72■□□□□ 0.43
CMTM3-203ENST00000460097 NEDD1Q8NHV4 660 aa17.72■□□□□ 0.43
CMTM3-203ENST00000460097 DHX58Q96C10 678 aa17.72■□□□□ 0.43
CMTM3-203ENST00000460097 PTPN18Q99952 460 aa17.72■□□□□ 0.43
CMTM3-203ENST00000460097 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP17.71■□□□□ 0.43
CMTM3-203ENST00000460097 KLF18A0A0U1RQI7 1052 aa17.71■□□□□ 0.43
CMTM3-203ENST00000460097 VGLL3A8MV65 326 aa17.71■□□□□ 0.43
CMTM3-203ENST00000460097 PRC1O43663 620 aa17.71■□□□□ 0.43
CMTM3-203ENST00000460097 ERCC5P28715 1186 aaPredicted RBP17.71■□□□□ 0.43
CMTM3-203ENST00000460097 ICA1Q05084 483 aa17.71■□□□□ 0.43
CMTM3-203ENST00000460097 MTMR2Q13614 643 aa17.71■□□□□ 0.43
CMTM3-203ENST00000460097 IFNL1Q8IU54 200 aa17.71■□□□□ 0.43
CMTM3-203ENST00000460097 NCOA7Q8NI08 942 aa17.71■□□□□ 0.43
CMTM3-203ENST00000460097 CCDC51Q96ER9 411 aa17.71■□□□□ 0.43
CMTM3-203ENST00000460097 BEGAINQ9BUH8 593 aa17.71■□□□□ 0.43
CMTM3-203ENST00000460097 ZCCHC17Q9NP64 241 aaKnown RBP17.71■□□□□ 0.43
CMTM3-203ENST00000460097 WBP1LQ9NX94 342 aa17.71■□□□□ 0.43
CMTM3-203ENST00000460097 MYO1AQ9UBC5 1043 aa17.71■□□□□ 0.43
CMTM3-203ENST00000460097 L1RE1Q9UN81 338 aa17.71■□□□□ 0.43
CMTM3-203ENST00000460097 H3BQF6 201 aa17.71■□□□□ 0.43
CMTM3-203ENST00000460097 NOP2P46087 812 aaKnown RBP17.71■□□□□ 0.43
CMTM3-203ENST00000460097 SARSP49591 514 aaKnown RBP17.71■□□□□ 0.43
CMTM3-203ENST00000460097 NT5C2P49902 561 aa17.71■□□□□ 0.43
CMTM3-203ENST00000460097 GNL2Q13823 731 aaKnown RBP17.71■□□□□ 0.43
CMTM3-203ENST00000460097 NR1I3Q14994 352 aa17.71■□□□□ 0.43
CMTM3-203ENST00000460097 SH3D19Q5HYK7 790 aa17.71■□□□□ 0.43
CMTM3-203ENST00000460097 KANK3Q6NY19 840 aa17.71■□□□□ 0.43
CMTM3-203ENST00000460097 TOGARAM2Q6ZUX3 1019 aa17.71■□□□□ 0.43
CMTM3-203ENST00000460097 ACER1Q8TDN7 264 aa17.71■□□□□ 0.43
CMTM3-203ENST00000460097 ESR2Q92731 530 aa17.71■□□□□ 0.43
CMTM3-203ENST00000460097 ACBD3Q9H3P7 528 aa17.71■□□□□ 0.43
CMTM3-203ENST00000460097 ARHGEF10LQ9HCE6 1279 aa17.71■□□□□ 0.43
CMTM3-203ENST00000460097 MED4Q9NPJ6 270 aa17.71■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms