RNA–Protein interactions for RNA: ENST00000459927.5

GPNMB-204, Transcript of glycoprotein nmb, humanhuman

TSL 4

Gene GPNMB, Length 577 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-204ENST00000459927 LOC102724159A0A0B4J2E5 919 aa14.55□□□□□ -0.08
GPNMB-204ENST00000459927 PWP2Q15269 919 aaKnown RBP14.55□□□□□ -0.08
GPNMB-204ENST00000459927 CCDC96Q2M329 555 aa14.55□□□□□ -0.08
GPNMB-204ENST00000459927 MCMDC2Q4G0Z9 681 aa14.55□□□□□ -0.08
GPNMB-204ENST00000459927 SYDE2Q5VT97 1194 aa14.55□□□□□ -0.08
GPNMB-204ENST00000459927 ATXN2LQ8WWM7 1075 aaKnown RBP14.55□□□□□ -0.08
GPNMB-204ENST00000459927 CLEC4DQ8WXI8 215 aa14.55□□□□□ -0.08
GPNMB-204ENST00000459927 TTC14Q96N46 770 aa14.55□□□□□ -0.08
GPNMB-204ENST00000459927 ALDH8A1Q9H2A2 487 aaPredicted RBP14.55□□□□□ -0.08
GPNMB-204ENST00000459927 MTIF3Q9H2K0 278 aaKnown RBP14.55□□□□□ -0.08
GPNMB-204ENST00000459927 NKX2-4Q9H2Z4 354 aa14.55□□□□□ -0.08
GPNMB-204ENST00000459927 SLC28A3Q9HAS3 691 aa14.55□□□□□ -0.08
GPNMB-204ENST00000459927 GPCPD1Q9NPB8 672 aa14.55□□□□□ -0.08
GPNMB-204ENST00000459927 YBX2Q9Y2T7 364 aaKnown RBP14.55□□□□□ -0.08
GPNMB-204ENST00000459927 NFIBO00712 420 aa14.54□□□□□ -0.08
GPNMB-204ENST00000459927 SUPT20HL2P0C7V6 817 aa14.54□□□□□ -0.08
GPNMB-204ENST00000459927 ALDH5A1P51649 535 aaPredicted RBP14.54□□□□□ -0.08
GPNMB-204ENST00000459927 PDE1AP54750 535 aa14.54□□□□□ -0.08
GPNMB-204ENST00000459927 TICAM2Q86XR7 235 aa14.54□□□□□ -0.08
GPNMB-204ENST00000459927 SCLYQ96I15 445 aa14.54□□□□□ -0.08
GPNMB-204ENST00000459927 FAM227BQ96M60 508 aa14.54□□□□□ -0.08
GPNMB-204ENST00000459927 WNT8AQ9H1J5 351 aa14.54□□□□□ -0.08
GPNMB-204ENST00000459927 TOMM22Q9NS69 142 aa14.54□□□□□ -0.08
GPNMB-204ENST00000459927 POLR3EQ9NVU0 708 aa14.54□□□□□ -0.08
GPNMB-204ENST00000459927 SLC4A7Q9Y6M7 1214 aa14.54□□□□□ -0.08
GPNMB-204ENST00000459927 PTPDC1A2A3K4 754 aa14.53□□□□□ -0.08
GPNMB-204ENST00000459927 HSPD1P10809 573 aaKnown RBP14.53□□□□□ -0.08
GPNMB-204ENST00000459927 IGFBP4P22692 258 aa14.53□□□□□ -0.08
GPNMB-204ENST00000459927 RABGGTBP53611 331 aa14.53□□□□□ -0.08
GPNMB-204ENST00000459927 PURAQ00577 322 aaKnown RBP14.53□□□□□ -0.08
GPNMB-204ENST00000459927 CCDC85BQ15834 202 aaPredicted RBP14.53□□□□□ -0.08
GPNMB-204ENST00000459927 RRP12Q5JTH9 1297 aaKnown RBP14.53□□□□□ -0.08
GPNMB-204ENST00000459927 ASB2Q96Q27 587 aa14.53□□□□□ -0.08
GPNMB-204ENST00000459927 TRMT13Q9NUP7 481 aaKnown RBP14.53□□□□□ -0.08
GPNMB-204ENST00000459927 ZBTB47Q9UFB7 747 aaPredicted RBP14.53□□□□□ -0.08
GPNMB-204ENST00000459927 FRMPD2Q68DX3 1309 aaPredicted RBP14.52□□□□□ -0.08
GPNMB-204ENST00000459927 TNFRSF10AO00220 468 aa14.52□□□□□ -0.09
GPNMB-204ENST00000459927 MYL3P08590 195 aa14.52□□□□□ -0.09
GPNMB-204ENST00000459927 PDHBP11177 359 aa14.52□□□□□ -0.09
GPNMB-204ENST00000459927 CYP2C9P11712 490 aa14.52□□□□□ -0.09
GPNMB-204ENST00000459927 MYOGP15173 224 aa14.52□□□□□ -0.09
GPNMB-204ENST00000459927 CALML3P27482 149 aa14.52□□□□□ -0.09
GPNMB-204ENST00000459927 NBPF20Q3BBV1 942 aa14.52□□□□□ -0.09
GPNMB-204ENST00000459927 RNF207Q6ZRF8 634 aa14.52□□□□□ -0.09
GPNMB-204ENST00000459927 RGS22Q8NE09 1264 aa14.52□□□□□ -0.09
GPNMB-204ENST00000459927 MTG1Q9BT17 334 aaPredicted RBP14.52□□□□□ -0.09
GPNMB-204ENST00000459927 GPHNQ9NQX3 736 aaPredicted RBP14.52□□□□□ -0.09
GPNMB-204ENST00000459927 PNMA2Q9UL42 364 aa14.52□□□□□ -0.09
GPNMB-204ENST00000459927 PCDHA11Q9Y5I1 949 aa14.52□□□□□ -0.09
GPNMB-204ENST00000459927 TNKSO95271 1327 aa14.51□□□□□ -0.09
GPNMB-204ENST00000459927 KPNA6O60684 536 aa14.51□□□□□ -0.09
GPNMB-204ENST00000459927 SNHG28P0DPA3 235 aa14.51□□□□□ -0.09
GPNMB-204ENST00000459927 CPT1AP50416 773 aa14.51□□□□□ -0.09
GPNMB-204ENST00000459927 RPS6P62753 249 aaKnown RBP14.51□□□□□ -0.09
GPNMB-204ENST00000459927 MRPS5P82675 430 aaKnown RBP14.51□□□□□ -0.09
GPNMB-204ENST00000459927 ZNF543Q08ER8 600 aa14.51□□□□□ -0.09
GPNMB-204ENST00000459927 MFSD6Q6ZSS7 791 aa14.51□□□□□ -0.09
GPNMB-204ENST00000459927 DNERQ8NFT8 737 aa14.51□□□□□ -0.09
GPNMB-204ENST00000459927 TTC28Q96AY4 2481 aa14.51□□□□□ -0.09
GPNMB-204ENST00000459927 A0A0D9SFI3 127 aa14.5□□□□□ -0.09
GPNMB-204ENST00000459927 A6NJR5 290 aa14.5□□□□□ -0.09
GPNMB-204ENST00000459927 NKRFO15226 690 aaKnown RBP eCLIP14.5□□□□□ -0.09
GPNMB-204ENST00000459927 EDNRBP24530 442 aa14.5□□□□□ -0.09
GPNMB-204ENST00000459927 PDE4DQ08499 809 aa14.5□□□□□ -0.09
GPNMB-204ENST00000459927 TTLL4Q14679 1199 aa14.5□□□□□ -0.09
GPNMB-204ENST00000459927 BRDTQ58F21 947 aaPredicted RBP14.5□□□□□ -0.09
GPNMB-204ENST00000459927 OR6J1Q8NGC5 347 aa14.5□□□□□ -0.09
GPNMB-204ENST00000459927 TBC1D5Q92609 795 aa14.5□□□□□ -0.09
GPNMB-204ENST00000459927 COPS5Q92905 334 aa14.5□□□□□ -0.09
GPNMB-204ENST00000459927 ZBBXA8MT70 800 aa14.49□□□□□ -0.09
GPNMB-204ENST00000459927 B4DLN1 442 aa14.49□□□□□ -0.09
GPNMB-204ENST00000459927 PFKMP08237 780 aa14.49□□□□□ -0.09
GPNMB-204ENST00000459927 IQCF3P0C7M6 154 aa14.49□□□□□ -0.09
GPNMB-204ENST00000459927 TXNP10599 105 aaKnown RBP14.49□□□□□ -0.09
GPNMB-204ENST00000459927 PCP11498 1178 aaKnown RBP14.49□□□□□ -0.09
GPNMB-204ENST00000459927 ATP2A2P16615 1042 aaKnown RBP14.49□□□□□ -0.09
GPNMB-204ENST00000459927 MRPL12P52815 198 aaKnown RBP14.49□□□□□ -0.09
GPNMB-204ENST00000459927 HAND2P61296 217 aa14.49□□□□□ -0.09
GPNMB-204ENST00000459927 NMIQ13287 307 aaPredicted RBP14.49□□□□□ -0.09
GPNMB-204ENST00000459927 HDAC1Q13547 482 aaPredicted RBP14.49□□□□□ -0.09
GPNMB-204ENST00000459927 NFRKBQ6P4R8 1299 aa14.49□□□□□ -0.09
GPNMB-204ENST00000459927 SLC30A10Q6XR72 485 aa14.49□□□□□ -0.09
GPNMB-204ENST00000459927 DEFB128Q7Z7B8 93 aa14.49□□□□□ -0.09
GPNMB-204ENST00000459927 ZNF589Q86UQ0 364 aaPredicted RBP14.49□□□□□ -0.09
GPNMB-204ENST00000459927 DGKHQ86XP1 1220 aa14.49□□□□□ -0.09
GPNMB-204ENST00000459927 RETREG2Q8NC44 543 aa14.49□□□□□ -0.09
GPNMB-204ENST00000459927 SCFD2Q8WU76 684 aa14.49□□□□□ -0.09
GPNMB-204ENST00000459927 MPHOSPH6Q99547 160 aaKnown RBP14.49□□□□□ -0.09
GPNMB-204ENST00000459927 UBA5Q9GZZ9 404 aa14.49□□□□□ -0.09
GPNMB-204ENST00000459927 LCTP09848 1927 aa14.49□□□□□ -0.09
GPNMB-204ENST00000459927 CHD9Q3L8U1 2897 aa14.48□□□□□ -0.09
GPNMB-204ENST00000459927 PTPN11Q06124 597 aaPredicted RBP14.48□□□□□ -0.09
GPNMB-204ENST00000459927 TMEM67Q5HYA8 995 aa14.48□□□□□ -0.09
GPNMB-204ENST00000459927 PHOSPHO2Q8TCD6 241 aa14.48□□□□□ -0.09
GPNMB-204ENST00000459927 PPP1R13LQ8WUF5 828 aa14.48□□□□□ -0.09
GPNMB-204ENST00000459927 CRBNQ96SW2 442 aa14.48□□□□□ -0.09
GPNMB-204ENST00000459927 MAF1Q9H063 256 aa14.48□□□□□ -0.09
GPNMB-204ENST00000459927 THEGQ9P2T0 379 aa14.48□□□□□ -0.09
GPNMB-204ENST00000459927 WDR19Q8NEZ3 1342 aa14.47□□□□□ -0.09
GPNMB-204ENST00000459927 TRIM6-TRIM34B2RNG4 842 aa14.47□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms