RNA–Protein interactions for RNA: ENST00000459902.1

CKAP2-204, Transcript of cytoskeleton associated protein 2, humanhuman

TSL 2

Gene CKAP2, Length 798 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2-204ENST00000459902 PLCD4Q9BRC7 762 aa9.3□□□□□ -0.92
CKAP2-204ENST00000459902 MRPS23Q9Y3D9 190 aaKnown RBP9.3□□□□□ -0.92
CKAP2-204ENST00000459902 TLDC2A0PJX2 215 aa9.29□□□□□ -0.92
CKAP2-204ENST00000459902 C7orf72A4D263 438 aa9.29□□□□□ -0.92
CKAP2-204ENST00000459902 IQCEQ6IPM2 695 aa9.29□□□□□ -0.92
CKAP2-204ENST00000459902 GALNT18Q6P9A2 607 aa9.29□□□□□ -0.92
CKAP2-204ENST00000459902 USP53Q70EK8 1073 aa9.29□□□□□ -0.92
CKAP2-204ENST00000459902 LILRA2Q8N149 483 aa9.29□□□□□ -0.92
CKAP2-204ENST00000459902 SHISA4Q96DD7 197 aa9.29□□□□□ -0.92
CKAP2-204ENST00000459902 ASIC4Q96FT7 647 aa9.29□□□□□ -0.92
CKAP2-204ENST00000459902 KIRREL1Q96J84 757 aa9.29□□□□□ -0.92
CKAP2-204ENST00000459902 ESYT3A0FGR9 886 aa9.28□□□□□ -0.92
CKAP2-204ENST00000459902 IRAK1P51617 712 aa9.28□□□□□ -0.92
CKAP2-204ENST00000459902 NLRX1Q86UT6 975 aa9.28□□□□□ -0.92
CKAP2-204ENST00000459902 DIO2Q92813 273 aa9.28□□□□□ -0.92
CKAP2-204ENST00000459902 TMEM260Q9NX78 707 aa9.28□□□□□ -0.92
CKAP2-204ENST00000459902 IMPACTQ9P2X3 320 aa9.28□□□□□ -0.92
CKAP2-204ENST00000459902 GPR160Q9UJ42 338 aa9.28□□□□□ -0.92
CKAP2-204ENST00000459902 ACSL6Q9UKU0 697 aa9.28□□□□□ -0.92
CKAP2-204ENST00000459902 NPFFR2Q9Y5X5 522 aa9.28□□□□□ -0.92
CKAP2-204ENST00000459902 TAF6LQ9Y6J9 622 aa9.28□□□□□ -0.92
CKAP2-204ENST00000459902 PPP1R11O60927 126 aaPredicted RBP9.27□□□□□ -0.93
CKAP2-204ENST00000459902 PAPLNO95428 1278 aa9.27□□□□□ -0.93
CKAP2-204ENST00000459902 LCP1P13796 627 aa9.27□□□□□ -0.93
CKAP2-204ENST00000459902 ITGB5P18084 799 aa9.27□□□□□ -0.93
CKAP2-204ENST00000459902 LTBRP36941 435 aa9.27□□□□□ -0.93
CKAP2-204ENST00000459902 GALK1P51570 392 aa9.27□□□□□ -0.93
CKAP2-204ENST00000459902 SUMO1P63165 101 aaKnown RBP9.27□□□□□ -0.93
CKAP2-204ENST00000459902 MVKQ03426 396 aa9.27□□□□□ -0.93
CKAP2-204ENST00000459902 KCNAB2Q13303 367 aa9.27□□□□□ -0.93
CKAP2-204ENST00000459902 SNX17Q15036 470 aa9.27□□□□□ -0.93
CKAP2-204ENST00000459902 RCBTB1Q8NDN9 531 aa9.27□□□□□ -0.93
CKAP2-204ENST00000459902 NLGN2Q8NFZ4 835 aa9.27□□□□□ -0.93
CKAP2-204ENST00000459902 RNF32Q9H0A6 362 aa9.27□□□□□ -0.93
CKAP2-204ENST00000459902 CCDC163A0A0D9SF12 145 aa9.26□□□□□ -0.93
CKAP2-204ENST00000459902 BIN1O00499 593 aa9.26□□□□□ -0.93
CKAP2-204ENST00000459902 C6orf222P0C671 652 aaPredicted RBP9.26□□□□□ -0.93
CKAP2-204ENST00000459902 PRKCAP17252 672 aa9.26□□□□□ -0.93
CKAP2-204ENST00000459902 KCNT2Q6UVM3 1135 aa9.26□□□□□ -0.93
CKAP2-204ENST00000459902 SIRT2Q8IXJ6 389 aa9.26□□□□□ -0.93
CKAP2-204ENST00000459902 NLGN1Q8N2Q7 840 aa9.26□□□□□ -0.93
CKAP2-204ENST00000459902 NUP43Q8NFH3 380 aa9.26□□□□□ -0.93
CKAP2-204ENST00000459902 DCAF4Q8WV16 495 aa9.26□□□□□ -0.93
CKAP2-204ENST00000459902 NPHS1O60500 1241 aa9.25□□□□□ -0.93
CKAP2-204ENST00000459902 MSL3P1P0C860 447 aa9.25□□□□□ -0.93
CKAP2-204ENST00000459902 DPF3Q92784 378 aa9.25□□□□□ -0.93
CKAP2-204ENST00000459902 FANCLQ9NW38 375 aa9.25□□□□□ -0.93
CKAP2-204ENST00000459902 GULP1Q9UBP9 304 aa9.25□□□□□ -0.93
CKAP2-204ENST00000459902 ASXL2Q76L83 1435 aa9.24□□□□□ -0.93
CKAP2-204ENST00000459902 A0A1W2PQ27 194 aa9.24□□□□□ -0.93
CKAP2-204ENST00000459902 A0A1W2PQ64 194 aa9.24□□□□□ -0.93
CKAP2-204ENST00000459902 A0A1W2PQC6 194 aa9.24□□□□□ -0.93
CKAP2-204ENST00000459902 A0A1W2PQD8 194 aa9.24□□□□□ -0.93
CKAP2-204ENST00000459902 MSCO60682 206 aa9.24□□□□□ -0.93
CKAP2-204ENST00000459902 CORO7P57737 925 aa9.24□□□□□ -0.93
CKAP2-204ENST00000459902 STYK1Q6J9G0 422 aa9.24□□□□□ -0.93
CKAP2-204ENST00000459902 PHF20Q9BVI0 1012 aa9.24□□□□□ -0.93
CKAP2-204ENST00000459902 GPR27Q9NS67 375 aa9.24□□□□□ -0.93
CKAP2-204ENST00000459902 TMA7Q9Y2S6 64 aaKnown RBP9.24□□□□□ -0.93
CKAP2-204ENST00000459902 TIMM13Q9Y5L4 95 aaPredicted RBP9.24□□□□□ -0.93
CKAP2-204ENST00000459902 CYP4F8P98187 520 aa9.23□□□□□ -0.93
CKAP2-204ENST00000459902 RSPO2Q6UXX9 243 aaPredicted RBP9.23□□□□□ -0.93
CKAP2-204ENST00000459902 ZSWIM9Q86XI8 627 aa9.23□□□□□ -0.93
CKAP2-204ENST00000459902 HOMER1Q86YM7 354 aa9.23□□□□□ -0.93
CKAP2-204ENST00000459902 APPBP2Q92624 585 aa9.23□□□□□ -0.93
CKAP2-204ENST00000459902 PTPRN2Q92932 1015 aa9.23□□□□□ -0.93
CKAP2-204ENST00000459902 CRTAC1Q9NQ79 661 aa9.23□□□□□ -0.93
CKAP2-204ENST00000459902 YBX2Q9Y2T7 364 aaKnown RBP9.23□□□□□ -0.93
CKAP2-204ENST00000459902 RWDD3Q9Y3V2 267 aa9.23□□□□□ -0.93
CKAP2-204ENST00000459902 TRAF6Q9Y4K3 522 aa9.23□□□□□ -0.93
CKAP2-204ENST00000459902 PCDHA2Q9Y5H9 948 aa9.23□□□□□ -0.93
CKAP2-204ENST00000459902 PPP1R12AO14974 1030 aaPredicted RBP9.22□□□□□ -0.93
CKAP2-204ENST00000459902 GLI1P08151 1106 aa9.22□□□□□ -0.93
CKAP2-204ENST00000459902 PNLIPP16233 465 aa9.22□□□□□ -0.93
CKAP2-204ENST00000459902 JUNBP17275 347 aaPredicted RBP9.22□□□□□ -0.93
CKAP2-204ENST00000459902 TAL1P17542 331 aaPredicted RBP9.22□□□□□ -0.93
CKAP2-204ENST00000459902 KCNMB1Q16558 191 aa9.22□□□□□ -0.93
CKAP2-204ENST00000459902 MTA3Q9BTC8 594 aa9.22□□□□□ -0.93
CKAP2-204ENST00000459902 NCOA5Q9HCD5 579 aaKnown RBP9.22□□□□□ -0.93
CKAP2-204ENST00000459902 PDLIM7Q9NR12 457 aa9.22□□□□□ -0.93
CKAP2-204ENST00000459902 FBLN5Q9UBX5 448 aa9.22□□□□□ -0.93
CKAP2-204ENST00000459902 FBXL7Q9UJT9 491 aa9.22□□□□□ -0.93
CKAP2-204ENST00000459902 CARMIL2Q6F5E8 1435 aa9.22□□□□□ -0.93
CKAP2-204ENST00000459902 ASMTLO95671 621 aa9.21□□□□□ -0.94
CKAP2-204ENST00000459902 TACR1P25103 407 aa9.21□□□□□ -0.94
CKAP2-204ENST00000459902 BCL6P41182 706 aa9.21□□□□□ -0.94
CKAP2-204ENST00000459902 RPL11P62913 178 aaKnown RBP9.21□□□□□ -0.94
CKAP2-204ENST00000459902 GABREP78334 506 aa9.21□□□□□ -0.94
CKAP2-204ENST00000459902 CBX2Q14781 532 aaPredicted RBP9.21□□□□□ -0.94
CKAP2-204ENST00000459902 SDE2Q6IQ49 451 aa9.21□□□□□ -0.94
CKAP2-204ENST00000459902 FAM168AQ92567 244 aa9.21□□□□□ -0.94
CKAP2-204ENST00000459902 ZFYVE21Q9BQ24 234 aa9.21□□□□□ -0.94
CKAP2-204ENST00000459902 BTG4Q9NY30 223 aa9.21□□□□□ -0.94
CKAP2-204ENST00000459902 ENPP3O14638 875 aa9.2□□□□□ -0.94
CKAP2-204ENST00000459902 XP32Q5T750 250 aa9.2□□□□□ -0.94
CKAP2-204ENST00000459902 MAMDC2Q7Z304 686 aaPredicted RBP9.2□□□□□ -0.94
CKAP2-204ENST00000459902 IFNL3Q8IZI9 196 aa9.2□□□□□ -0.94
CKAP2-204ENST00000459902 LZTR1Q8N653 840 aa9.2□□□□□ -0.94
CKAP2-204ENST00000459902 SLC7A14Q8TBB6 771 aa9.2□□□□□ -0.94
CKAP2-204ENST00000459902 PLEKHO2Q8TD55 490 aa9.2□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms