RNA–Protein interactions for RNA: ENST00000459860.1

SSNA1-202, Transcript of SS nuclear autoantigen 1, humanhuman

TSL 1 (best)

Gene SSNA1, Length 1,170 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSNA1-202ENST00000459860 PNMA6FA0A0J9YX94 578 aa25.19■■□□□ 1.62
SSNA1-202ENST00000459860 CYTH3O43739 400 aa25.19■■□□□ 1.62
SSNA1-202ENST00000459860 MSCO60682 206 aa25.19■■□□□ 1.62
SSNA1-202ENST00000459860 PLEKHA8P1O95397 391 aa25.19■■□□□ 1.62
SSNA1-202ENST00000459860 IGHA2P01877 340 aa25.19■■□□□ 1.62
SSNA1-202ENST00000459860 CYBAP13498 195 aa25.19■■□□□ 1.62
SSNA1-202ENST00000459860 APOBRQ0VD83 1088 aa25.19■■□□□ 1.62
SSNA1-202ENST00000459860 BAATQ14032 418 aaPredicted RBP25.19■■□□□ 1.62
SSNA1-202ENST00000459860 FBXL16Q8N461 479 aa25.19■■□□□ 1.62
SSNA1-202ENST00000459860 ADD3Q9UEY8 706 aaKnown RBP25.19■■□□□ 1.62
SSNA1-202ENST00000459860 PCDHA1Q9Y5I3 950 aa25.19■■□□□ 1.62
SSNA1-202ENST00000459860 A0A1W2PPC1 479 aa25.18■■□□□ 1.62
SSNA1-202ENST00000459860 ASB14A6NK59 587 aa25.18■■□□□ 1.62
SSNA1-202ENST00000459860 CALML3P27482 149 aa25.18■■□□□ 1.62
SSNA1-202ENST00000459860 MAMDC4Q6UXC1 1216 aa25.18■■□□□ 1.62
SSNA1-202ENST00000459860 SLC30A10Q6XR72 485 aa25.18■■□□□ 1.62
SSNA1-202ENST00000459860 TMTC3Q6ZXV5 915 aa25.18■■□□□ 1.62
SSNA1-202ENST00000459860 RGS22Q8NE09 1264 aa25.18■■□□□ 1.62
SSNA1-202ENST00000459860 PIBF1Q8WXW3 757 aa25.18■■□□□ 1.62
SSNA1-202ENST00000459860 MPHOSPH6Q99547 160 aaKnown RBP25.18■■□□□ 1.62
SSNA1-202ENST00000459860 CCDC196A0A1B0GTZ2 297 aa25.17■■□□□ 1.62
SSNA1-202ENST00000459860 METAP2P50579 478 aaKnown RBP eCLIP25.17■■□□□ 1.62
SSNA1-202ENST00000459860 PPP2R5BQ15173 497 aa25.17■■□□□ 1.62
SSNA1-202ENST00000459860 SLC35G1Q2M3R5 365 aa25.17■■□□□ 1.62
SSNA1-202ENST00000459860 C8orf34Q49A92 452 aa25.17■■□□□ 1.62
SSNA1-202ENST00000459860 SRBD1Q8N5C6 995 aaKnown RBP25.17■■□□□ 1.62
SSNA1-202ENST00000459860 AGXT2Q9BYV1 514 aa25.17■■□□□ 1.62
SSNA1-202ENST00000459860 UPF3BQ9BZI7 483 aaKnown RBP25.17■■□□□ 1.62
SSNA1-202ENST00000459860 LAMA3Q16787 3333 aa25.16■■□□□ 1.62
SSNA1-202ENST00000459860 RPS6P62753 249 aaKnown RBP25.16■■□□□ 1.62
SSNA1-202ENST00000459860 ARMCX2Q7L311 632 aa25.16■■□□□ 1.62
SSNA1-202ENST00000459860 FGD4Q96M96 766 aa25.16■■□□□ 1.62
SSNA1-202ENST00000459860 PDRG1Q9NUG6 133 aa25.16■■□□□ 1.62
SSNA1-202ENST00000459860 CDKN2AIPQ9NXV6 580 aaPredicted RBP25.16■■□□□ 1.62
SSNA1-202ENST00000459860 DDX20Q9UHI6 824 aaKnown RBP25.16■■□□□ 1.62
SSNA1-202ENST00000459860 SOWAHBA6NEL2 793 aa25.15■■□□□ 1.62
SSNA1-202ENST00000459860 B4DLN1 442 aa25.15■■□□□ 1.62
SSNA1-202ENST00000459860 SOX1O00570 391 aaPredicted RBP25.15■■□□□ 1.62
SSNA1-202ENST00000459860 SEPT4O43236 478 aa25.15■■□□□ 1.62
SSNA1-202ENST00000459860 PPP1R11O60927 126 aaPredicted RBP25.15■■□□□ 1.62
SSNA1-202ENST00000459860 SEC24BO95487 1268 aa25.15■■□□□ 1.62
SSNA1-202ENST00000459860 MRPL12P52815 198 aaKnown RBP25.15■■□□□ 1.62
SSNA1-202ENST00000459860 PRAMEF19Q5SWL8 479 aa25.15■■□□□ 1.62
SSNA1-202ENST00000459860 CMTR1Q8N1G2 835 aaKnown RBP25.15■■□□□ 1.62
SSNA1-202ENST00000459860 CCDC82Q8N4S0 544 aa25.15■■□□□ 1.62
SSNA1-202ENST00000459860 TRPV1Q8NER1 839 aa25.15■■□□□ 1.62
SSNA1-202ENST00000459860 GDF15Q99988 308 aa25.15■■□□□ 1.62
SSNA1-202ENST00000459860 ZHX1Q9UKY1 873 aaPredicted RBP25.15■■□□□ 1.62
SSNA1-202ENST00000459860 LRRC37A2A6NM11 1700 aa25.15■■□□□ 1.62
SSNA1-202ENST00000459860 LOC102724159A0A0B4J2E5 919 aa25.14■■□□□ 1.62
SSNA1-202ENST00000459860 PWP2Q15269 919 aaKnown RBP25.14■■□□□ 1.62
SSNA1-202ENST00000459860 ABHD16BQ9H3Z7 469 aa25.14■■□□□ 1.62
SSNA1-202ENST00000459860 C11orf49Q9H6J7 331 aa25.14■■□□□ 1.62
SSNA1-202ENST00000459860 CFBP00751 764 aa25.13■■□□□ 1.61
SSNA1-202ENST00000459860 ALDH5A1P51649 535 aaPredicted RBP25.13■■□□□ 1.61
SSNA1-202ENST00000459860 C7orf61Q8IZ16 206 aa25.13■■□□□ 1.61
SSNA1-202ENST00000459860 DNERQ8NFT8 737 aa25.13■■□□□ 1.61
SSNA1-202ENST00000459860 NID2Q14112 1375 aa25.13■■□□□ 1.61
SSNA1-202ENST00000459860 SNAI1O95863 264 aaPredicted RBP25.12■■□□□ 1.61
SSNA1-202ENST00000459860 AKR1A1P14550 325 aa25.12■■□□□ 1.61
SSNA1-202ENST00000459860 BMP8BP34820 402 aa25.12■■□□□ 1.61
SSNA1-202ENST00000459860 ACVR2BQ13705 512 aa25.12■■□□□ 1.61
SSNA1-202ENST00000459860 LHX8Q68G74 356 aa25.12■■□□□ 1.61
SSNA1-202ENST00000459860 SAMD3Q8N6K7 520 aa25.12■■□□□ 1.61
SSNA1-202ENST00000459860 MAP3K20Q9NYL2 800 aaKnown RBP25.12■■□□□ 1.61
SSNA1-202ENST00000459860 CNTNAP5Q8WYK1 1306 aa25.12■■□□□ 1.61
SSNA1-202ENST00000459860 COL6A1P12109 1028 aa25.11■■□□□ 1.61
SSNA1-202ENST00000459860 TOB2Q14106 344 aaPredicted RBP25.11■■□□□ 1.61
SSNA1-202ENST00000459860 PURBQ96QR8 312 aaKnown RBP25.11■■□□□ 1.61
SSNA1-202ENST00000459860 UPF2Q9HAU5 1272 aaKnown RBP25.11■■□□□ 1.61
SSNA1-202ENST00000459860 FAM184BQ9ULE4 1060 aa25.11■■□□□ 1.61
SSNA1-202ENST00000459860 ZMYND8Q9ULU4 1186 aaPredicted RBP25.11■■□□□ 1.61
SSNA1-202ENST00000459860 ZNF865P0CJ78 1059 aaPredicted RBP25.1■■□□□ 1.61
SSNA1-202ENST00000459860 RARBP10826 455 aa25.1■■□□□ 1.61
SSNA1-202ENST00000459860 ANKRD1Q15327 319 aa25.1■■□□□ 1.61
SSNA1-202ENST00000459860 SYTL5Q8TDW5 730 aaPredicted RBP25.1■■□□□ 1.61
SSNA1-202ENST00000459860 ASTN1O14525 1302 aa25.1■■□□□ 1.61
SSNA1-202ENST00000459860 GCOM1H8Y6P7 765 aaPredicted RBP25.09■■□□□ 1.61
SSNA1-202ENST00000459860 POLR2MP0CAP2 368 aa25.09■■□□□ 1.61
SSNA1-202ENST00000459860 CDC27P30260 824 aa25.09■■□□□ 1.61
SSNA1-202ENST00000459860 HSD17B4P51659 736 aa25.09■■□□□ 1.61
SSNA1-202ENST00000459860 EVCP57679 992 aa25.09■■□□□ 1.61
SSNA1-202ENST00000459860 PDE4DQ08499 809 aa25.09■■□□□ 1.61
SSNA1-202ENST00000459860 TBC1D5Q92609 795 aa25.09■■□□□ 1.61
SSNA1-202ENST00000459860 IL17RAQ96F46 866 aa25.09■■□□□ 1.61
SSNA1-202ENST00000459860 LRCH3Q96II8 777 aa25.09■■□□□ 1.61
SSNA1-202ENST00000459860 hCG_1642624A0A1W2PR95 340 aa25.08■■□□□ 1.61
SSNA1-202ENST00000459860 PDIA3P30101 505 aaKnown RBP25.08■■□□□ 1.61
SSNA1-202ENST00000459860 ADD1P35611 737 aaKnown RBP25.08■■□□□ 1.61
SSNA1-202ENST00000459860 GHRHRQ02643 423 aa25.08■■□□□ 1.61
SSNA1-202ENST00000459860 ANO1Q5XXA6 986 aa25.08■■□□□ 1.61
SSNA1-202ENST00000459860 HEATR3Q7Z4Q2 680 aa25.08■■□□□ 1.61
SSNA1-202ENST00000459860 NSUN6Q8TEA1 469 aaKnown RBP25.08■■□□□ 1.61
SSNA1-202ENST00000459860 CUL5Q93034 780 aa25.08■■□□□ 1.61
SSNA1-202ENST00000459860 ZNF274Q96GC6 653 aaPredicted RBP25.08■■□□□ 1.61
SSNA1-202ENST00000459860 VTA1Q9NP79 307 aa25.08■■□□□ 1.61
SSNA1-202ENST00000459860 hCG_1984214I3L0E3 225 aa25.07■■□□□ 1.6
SSNA1-202ENST00000459860 OPLAHO14841 1288 aa25.07■■□□□ 1.6
SSNA1-202ENST00000459860 SYN1P17600 705 aa25.07■■□□□ 1.6
SSNA1-202ENST00000459860 AKAP17AQ02040 695 aaKnown RBP25.07■■□□□ 1.6
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms