RNA–Protein interactions for RNA: ENST00000459756.5

COL7A1-203, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 5

Gene COL7A1, Length 818 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-203ENST00000459756 MCM5P33992 734 aa18.76■□□□□ 0.59
COL7A1-203ENST00000459756 MAGEA10P43363 369 aaPredicted RBP18.76■□□□□ 0.59
COL7A1-203ENST00000459756 MRPL12P52815 198 aaKnown RBP18.76■□□□□ 0.59
COL7A1-203ENST00000459756 NKX3-2P78367 333 aa18.76■□□□□ 0.59
COL7A1-203ENST00000459756 TROAPQ12815 778 aa18.76■□□□□ 0.59
COL7A1-203ENST00000459756 KCNA10Q16322 511 aa18.76■□□□□ 0.59
COL7A1-203ENST00000459756 RNF20Q5VTR2 975 aa18.76■□□□□ 0.59
COL7A1-203ENST00000459756 IQSEC1Q6DN90 963 aa18.76■□□□□ 0.59
COL7A1-203ENST00000459756 TAPT1Q6NXT6 567 aa18.76■□□□□ 0.59
COL7A1-203ENST00000459756 NOL8Q76FK4 1167 aaKnown RBP18.76■□□□□ 0.59
COL7A1-203ENST00000459756 FBXO16Q8IX29 292 aaPredicted RBP18.76■□□□□ 0.59
COL7A1-203ENST00000459756 NUP133Q8WUM0 1156 aa18.76■□□□□ 0.59
COL7A1-203ENST00000459756 MTMR8Q96EF0 704 aa18.76■□□□□ 0.59
COL7A1-203ENST00000459756 AMNQ9BXJ7 453 aa18.76■□□□□ 0.59
COL7A1-203ENST00000459756 PRKAG2Q9UGJ0 569 aa18.76■□□□□ 0.59
COL7A1-203ENST00000459756 DDX49Q9Y6V7 483 aaKnown RBP18.76■□□□□ 0.59
COL7A1-203ENST00000459756 MYADML2A6NDP7 307 aa18.75■□□□□ 0.59
COL7A1-203ENST00000459756 ZBTB5O15062 677 aa18.75■□□□□ 0.59
COL7A1-203ENST00000459756 PRC1O43663 620 aa18.75■□□□□ 0.59
COL7A1-203ENST00000459756 FXR1P51114 621 aaKnown RBP eCLIP18.75■□□□□ 0.59
COL7A1-203ENST00000459756 TRIM60Q495X7 471 aa18.75■□□□□ 0.59
COL7A1-203ENST00000459756 GNASQ5JWF2 1037 aa18.75■□□□□ 0.59
COL7A1-203ENST00000459756 EEPD1Q7L9B9 569 aa18.75■□□□□ 0.59
COL7A1-203ENST00000459756 TMEM87BQ96K49 555 aa18.75■□□□□ 0.59
COL7A1-203ENST00000459756 LY9Q9HBG7 655 aa18.75■□□□□ 0.59
COL7A1-203ENST00000459756 GNEQ9Y223 722 aaKnown RBP18.75■□□□□ 0.59
COL7A1-203ENST00000459756 C11orf97A0A1B0GVM6 126 aaPredicted RBP18.74■□□□□ 0.59
COL7A1-203ENST00000459756 SMPD1P17405 629 aa18.74■□□□□ 0.59
COL7A1-203ENST00000459756 PDE4DQ08499 809 aa18.74■□□□□ 0.59
COL7A1-203ENST00000459756 TRAF1Q13077 416 aa18.74■□□□□ 0.59
COL7A1-203ENST00000459756 TMTC2Q8N394 836 aa18.74■□□□□ 0.59
COL7A1-203ENST00000459756 MAP3K14Q99558 947 aa18.74■□□□□ 0.59
COL7A1-203ENST00000459756 AP5M1Q9H0R1 490 aa18.74■□□□□ 0.59
COL7A1-203ENST00000459756 RIOX1Q9H6W3 641 aa18.74■□□□□ 0.59
COL7A1-203ENST00000459756 STARD7Q9NQZ5 370 aa18.74■□□□□ 0.59
COL7A1-203ENST00000459756 PDGFCQ9NRA1 345 aa18.74■□□□□ 0.59
COL7A1-203ENST00000459756 Q9Y3F1 56 aa18.74■□□□□ 0.59
COL7A1-203ENST00000459756 CTAGE5O15320 804 aa18.73■□□□□ 0.59
COL7A1-203ENST00000459756 DDAH1O94760 285 aa18.73■□□□□ 0.59
COL7A1-203ENST00000459756 EDNRBP24530 442 aa18.73■□□□□ 0.59
COL7A1-203ENST00000459756 TLK2Q86UE8 772 aa18.73■□□□□ 0.59
COL7A1-203ENST00000459756 ZNF654Q8IZM8 581 aa18.73■□□□□ 0.59
COL7A1-203ENST00000459756 GLT1D1Q96MS3 346 aa18.73■□□□□ 0.59
COL7A1-203ENST00000459756 LBHD1Q9BQE6 289 aaPredicted RBP18.73■□□□□ 0.59
COL7A1-203ENST00000459756 ELP1O95163 1332 aa18.73■□□□□ 0.59
COL7A1-203ENST00000459756 RBM47A0AV96 593 aaKnown RBP18.72■□□□□ 0.59
COL7A1-203ENST00000459756 ASGR1P07306 291 aa18.72■□□□□ 0.59
COL7A1-203ENST00000459756 KIF5BP33176 963 aa18.72■□□□□ 0.59
COL7A1-203ENST00000459756 IRX5P78411 483 aaPredicted RBP18.72■□□□□ 0.59
COL7A1-203ENST00000459756 TLE2Q04725 743 aa18.72■□□□□ 0.59
COL7A1-203ENST00000459756 FSCN1Q16658 493 aaKnown RBP18.72■□□□□ 0.59
COL7A1-203ENST00000459756 DUSP28Q4G0W2 176 aa18.72■□□□□ 0.59
COL7A1-203ENST00000459756 SYTL5Q8TDW5 730 aaPredicted RBP18.72■□□□□ 0.59
COL7A1-203ENST00000459756 NSUN6Q8TEA1 469 aaKnown RBP18.72■□□□□ 0.59
COL7A1-203ENST00000459756 TBC1D5Q92609 795 aa18.72■□□□□ 0.59
COL7A1-203ENST00000459756 UBE2OQ9C0C9 1292 aaKnown RBP18.72■□□□□ 0.59
COL7A1-203ENST00000459756 PCDHA1Q9Y5I3 950 aa18.72■□□□□ 0.59
COL7A1-203ENST00000459756 CCDC69A6NI79 296 aa18.71■□□□□ 0.59
COL7A1-203ENST00000459756 SH2B2O14492 632 aaPredicted RBP18.71■□□□□ 0.59
COL7A1-203ENST00000459756 DYNC1LI2O43237 492 aaPredicted RBP18.71■□□□□ 0.59
COL7A1-203ENST00000459756 PPP1R11O60927 126 aaPredicted RBP18.71■□□□□ 0.59
COL7A1-203ENST00000459756 LIFRP42702 1097 aa18.71■□□□□ 0.59
COL7A1-203ENST00000459756 GHRHRQ02643 423 aa18.71■□□□□ 0.59
COL7A1-203ENST00000459756 SLC35G1Q2M3R5 365 aa18.71■□□□□ 0.59
COL7A1-203ENST00000459756 NFXL1Q6ZNB6 911 aa18.71■□□□□ 0.59
COL7A1-203ENST00000459756 ANKRD33Q7Z3H0 272 aa18.71■□□□□ 0.59
COL7A1-203ENST00000459756 HOMER1Q86YM7 354 aa18.71■□□□□ 0.59
COL7A1-203ENST00000459756 CTCFLQ8NI51 663 aaPredicted RBP18.71■□□□□ 0.59
COL7A1-203ENST00000459756 TOX2Q96NM4 488 aa18.71■□□□□ 0.59
COL7A1-203ENST00000459756 PIGSQ96S52 555 aa18.71■□□□□ 0.59
COL7A1-203ENST00000459756 WDR11Q9BZH6 1224 aa18.71■□□□□ 0.59
COL7A1-203ENST00000459756 PRDM5Q9NQX1 630 aaPredicted RBP18.71■□□□□ 0.59
COL7A1-203ENST00000459756 GPHNQ9NQX3 736 aaPredicted RBP18.71■□□□□ 0.59
COL7A1-203ENST00000459756 PDLIM7Q9NR12 457 aa18.71■□□□□ 0.59
COL7A1-203ENST00000459756 MAP3K20Q9NYL2 800 aaKnown RBP18.71■□□□□ 0.59
COL7A1-203ENST00000459756 LAMA3Q16787 3333 aa18.7■□□□□ 0.58
COL7A1-203ENST00000459756 PNMA6FA0A0J9YX94 578 aa18.7■□□□□ 0.58
COL7A1-203ENST00000459756 CYTH3O43739 400 aa18.7■□□□□ 0.58
COL7A1-203ENST00000459756 ZEB2O60315 1214 aa18.7■□□□□ 0.58
COL7A1-203ENST00000459756 HSD17B4P51659 736 aa18.7■□□□□ 0.58
COL7A1-203ENST00000459756 MDM2Q00987 491 aaPredicted RBP18.7■□□□□ 0.58
COL7A1-203ENST00000459756 SAMD3Q8N6K7 520 aa18.7■□□□□ 0.58
COL7A1-203ENST00000459756 SCFD2Q8WU76 684 aa18.7■□□□□ 0.58
COL7A1-203ENST00000459756 VTI1AQ96AJ9 217 aa18.7■□□□□ 0.58
COL7A1-203ENST00000459756 IWS1Q96ST2 819 aa18.7■□□□□ 0.58
COL7A1-203ENST00000459756 RMDN3Q96TC7 470 aa18.7■□□□□ 0.58
COL7A1-203ENST00000459756 LZTS2Q9BRK4 669 aa18.7■□□□□ 0.58
COL7A1-203ENST00000459756 COL20A1Q9P218 1284 aa18.7■□□□□ 0.58
COL7A1-203ENST00000459756 MROH7Q68CQ1 1323 aa18.7■□□□□ 0.58
COL7A1-203ENST00000459756 OPLAHO14841 1288 aa18.69■□□□□ 0.58
COL7A1-203ENST00000459756 PQBP1O60828 265 aaKnown RBP18.69■□□□□ 0.58
COL7A1-203ENST00000459756 CABYRO75952 493 aa18.69■□□□□ 0.58
COL7A1-203ENST00000459756 CFBP00751 764 aa18.69■□□□□ 0.58
COL7A1-203ENST00000459756 CLTBP09497 229 aa18.69■□□□□ 0.58
COL7A1-203ENST00000459756 CALM1P0DP23 149 aa18.69■□□□□ 0.58
COL7A1-203ENST00000459756 CALM2P0DP24 149 aa18.69■□□□□ 0.58
COL7A1-203ENST00000459756 CALM3P0DP25 149 aa18.69■□□□□ 0.58
COL7A1-203ENST00000459756 SMARCA1P28370 1054 aa18.69■□□□□ 0.58
COL7A1-203ENST00000459756 GNAQP50148 359 aa18.69■□□□□ 0.58
COL7A1-203ENST00000459756 BEX3Q00994 111 aa18.69■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms