RNA–Protein interactions for RNA: ENST00000459004.1

SCARNA18-201, small Cajal body-specific RNA 18, humanhuman

BASIC

Gene SCARNA18, Length 134 nt, Biotype snoRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA18-201ENST00000459004 PEX10O60683 326 aa4.64□□□□□ -1.67
SCARNA18-201ENST00000459004 MSL3P1P0C860 447 aa4.64□□□□□ -1.67
SCARNA18-201ENST00000459004 GRIA2P42262 883 aa4.64□□□□□ -1.67
SCARNA18-201ENST00000459004 MAP4K2Q12851 820 aa4.64□□□□□ -1.67
SCARNA18-201ENST00000459004 IFRD2Q12894 506 aaPredicted RBP4.64□□□□□ -1.67
SCARNA18-201ENST00000459004 TESK1Q15569 626 aa4.64□□□□□ -1.67
SCARNA18-201ENST00000459004 SF1Q15637 639 aaKnown RBP4.64□□□□□ -1.67
SCARNA18-201ENST00000459004 MTERF2Q49AM1 385 aa4.64□□□□□ -1.67
SCARNA18-201ENST00000459004 SPATC1Q76KD6 591 aa4.64□□□□□ -1.67
SCARNA18-201ENST00000459004 BHLHE22Q8NFJ8 381 aaPredicted RBP4.64□□□□□ -1.67
SCARNA18-201ENST00000459004 KCTD13Q8WZ19 329 aa4.64□□□□□ -1.67
SCARNA18-201ENST00000459004 UBXN4Q92575 508 aa4.64□□□□□ -1.67
SCARNA18-201ENST00000459004 DIO2Q92813 273 aa4.64□□□□□ -1.67
SCARNA18-201ENST00000459004 DNAJC2Q99543 621 aaKnown RBP4.64□□□□□ -1.67
SCARNA18-201ENST00000459004 TNFRSF12AQ9NP84 129 aa4.64□□□□□ -1.67
SCARNA18-201ENST00000459004 TRAV20A0A0B4J274 112 aa4.63□□□□□ -1.67
SCARNA18-201ENST00000459004 PPP1R11O60927 126 aaPredicted RBP4.63□□□□□ -1.67
SCARNA18-201ENST00000459004 FGFR1P11362 822 aa4.63□□□□□ -1.67
SCARNA18-201ENST00000459004 YBX1P67809 324 aaKnown RBP4.63□□□□□ -1.67
SCARNA18-201ENST00000459004 TMEM62Q0P6H9 643 aa4.63□□□□□ -1.67
SCARNA18-201ENST00000459004 RASA3Q14644 834 aa4.63□□□□□ -1.67
SCARNA18-201ENST00000459004 CBX2Q14781 532 aaPredicted RBP4.63□□□□□ -1.67
SCARNA18-201ENST00000459004 NR1I3Q14994 352 aa4.63□□□□□ -1.67
SCARNA18-201ENST00000459004 RAB3GAP1Q15042 981 aa4.63□□□□□ -1.67
SCARNA18-201ENST00000459004 PRSS53Q2L4Q9 553 aa4.63□□□□□ -1.67
SCARNA18-201ENST00000459004 SLC35F1Q5T1Q4 408 aa4.63□□□□□ -1.67
SCARNA18-201ENST00000459004 ZNF648Q5T619 568 aaPredicted RBP4.63□□□□□ -1.67
SCARNA18-201ENST00000459004 ACBD5Q5T8D3 534 aaPredicted RBP4.63□□□□□ -1.67
SCARNA18-201ENST00000459004 OLFML2BQ68BL8 750 aa4.63□□□□□ -1.67
SCARNA18-201ENST00000459004 BICRALQ6AI39 1079 aa4.63□□□□□ -1.67
SCARNA18-201ENST00000459004 SYDE1Q6ZW31 735 aaPredicted RBP4.63□□□□□ -1.67
SCARNA18-201ENST00000459004 ZNF605Q86T29 641 aa4.63□□□□□ -1.67
SCARNA18-201ENST00000459004 LZTR1Q8N653 840 aa4.63□□□□□ -1.67
SCARNA18-201ENST00000459004 TMEM145Q8NBT3 493 aa4.63□□□□□ -1.67
SCARNA18-201ENST00000459004 KCNN1Q92952 543 aa4.63□□□□□ -1.67
SCARNA18-201ENST00000459004 C1orf159Q96HA4 380 aa4.63□□□□□ -1.67
SCARNA18-201ENST00000459004 DEPDC7Q96QD5 511 aa4.63□□□□□ -1.67
SCARNA18-201ENST00000459004 SRPK1Q96SB4 655 aaKnown RBP4.63□□□□□ -1.67
SCARNA18-201ENST00000459004 IER2Q9BTL4 223 aa4.63□□□□□ -1.67
SCARNA18-201ENST00000459004 KRTAP4-8Q9BYQ9 185 aa4.63□□□□□ -1.67
SCARNA18-201ENST00000459004 OSBPL2Q9H1P3 480 aa4.63□□□□□ -1.67
SCARNA18-201ENST00000459004 ARHGEF4Q9NR80 690 aa4.63□□□□□ -1.67
SCARNA18-201ENST00000459004 SNTG2Q9NY99 539 aa4.63□□□□□ -1.67
SCARNA18-201ENST00000459004 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP4.63□□□□□ -1.67
SCARNA18-201ENST00000459004 KLHL14Q9P2G3 628 aa4.63□□□□□ -1.67
SCARNA18-201ENST00000459004 GULP1Q9UBP9 304 aa4.63□□□□□ -1.67
SCARNA18-201ENST00000459004 TMEFF2Q9UIK5 374 aaPredicted RBP4.63□□□□□ -1.67
SCARNA18-201ENST00000459004 MYOCOSA0A1B0GUC4 107 aa4.62□□□□□ -1.67
SCARNA18-201ENST00000459004 FAM221BA6H8Z2 402 aa4.62□□□□□ -1.67
SCARNA18-201ENST00000459004 ARNTLO00327 626 aa4.62□□□□□ -1.67
SCARNA18-201ENST00000459004 PRODHO43272 600 aa4.62□□□□□ -1.67
SCARNA18-201ENST00000459004 SRGAP3O43295 1099 aa4.62□□□□□ -1.67
SCARNA18-201ENST00000459004 DLX3O60479 287 aa4.62□□□□□ -1.67
SCARNA18-201ENST00000459004 CYBBP04839 570 aa4.62□□□□□ -1.67
SCARNA18-201ENST00000459004 SDHBP21912 280 aa4.62□□□□□ -1.67
SCARNA18-201ENST00000459004 TACR1P25103 407 aa4.62□□□□□ -1.67
SCARNA18-201ENST00000459004 GTF2A2P52657 109 aa4.62□□□□□ -1.67
SCARNA18-201ENST00000459004 SSRP1Q08945 709 aaKnown RBP4.62□□□□□ -1.67
SCARNA18-201ENST00000459004 KCNAB2Q13303 367 aa4.62□□□□□ -1.67
SCARNA18-201ENST00000459004 INF2Q27J81 1249 aa4.62□□□□□ -1.67
SCARNA18-201ENST00000459004 TMEM132EQ6IEE7 984 aa4.62□□□□□ -1.67
SCARNA18-201ENST00000459004 PAQR3Q6TCH7 311 aa4.62□□□□□ -1.67
SCARNA18-201ENST00000459004 NSMFQ6X4W1 530 aa4.62□□□□□ -1.67
SCARNA18-201ENST00000459004 CABP7Q86V35 215 aa4.62□□□□□ -1.67
SCARNA18-201ENST00000459004 PPIL6Q8IXY8 311 aa4.62□□□□□ -1.67
SCARNA18-201ENST00000459004 PPP1R16BQ96T49 567 aa4.62□□□□□ -1.67
SCARNA18-201ENST00000459004 MTA3Q9BTC8 594 aa4.62□□□□□ -1.67
SCARNA18-201ENST00000459004 MCOLN1Q9GZU1 580 aa4.62□□□□□ -1.67
SCARNA18-201ENST00000459004 KCNK12Q9HB15 430 aa4.62□□□□□ -1.67
SCARNA18-201ENST00000459004 PFDN2Q9UHV9 154 aa4.62□□□□□ -1.67
SCARNA18-201ENST00000459004 RWDD3Q9Y3V2 267 aa4.62□□□□□ -1.67
SCARNA18-201ENST00000459004 TIMM13Q9Y5L4 95 aaPredicted RBP4.62□□□□□ -1.67
SCARNA18-201ENST00000459004 KDM2BQ8NHM5 1336 aa4.62□□□□□ -1.67
SCARNA18-201ENST00000459004 TEX51A0A1B0GUA7 166 aa4.61□□□□□ -1.67
SCARNA18-201ENST00000459004 NUDT19A8MXV4 375 aa4.61□□□□□ -1.67
SCARNA18-201ENST00000459004 MYO1BO43795 1136 aa4.61□□□□□ -1.67
SCARNA18-201ENST00000459004 SEMA7AO75326 666 aa4.61□□□□□ -1.67
SCARNA18-201ENST00000459004 FUCA1P04066 466 aa4.61□□□□□ -1.67
SCARNA18-201ENST00000459004 DBHP09172 617 aa4.61□□□□□ -1.67
SCARNA18-201ENST00000459004 TMEM253P0C7T8 217 aa4.61□□□□□ -1.67
SCARNA18-201ENST00000459004 PABPC1P11940 636 aaKnown RBP4.61□□□□□ -1.67
SCARNA18-201ENST00000459004 LTBRP36941 435 aa4.61□□□□□ -1.67
SCARNA18-201ENST00000459004 MAPKAPK2P49137 400 aa4.61□□□□□ -1.67
SCARNA18-201ENST00000459004 RPL11P62913 178 aaKnown RBP4.61□□□□□ -1.67
SCARNA18-201ENST00000459004 SRSF3P84103 164 aaKnown RBP4.61□□□□□ -1.67
SCARNA18-201ENST00000459004 NFE2L2Q16236 605 aa4.61□□□□□ -1.67
SCARNA18-201ENST00000459004 LONRF2Q1L5Z9 754 aa4.61□□□□□ -1.67
SCARNA18-201ENST00000459004 MBLAC2Q68D91 279 aa4.61□□□□□ -1.67
SCARNA18-201ENST00000459004 DENND5AQ6IQ26 1287 aa4.61□□□□□ -1.67
SCARNA18-201ENST00000459004 RPTNQ6XPR3 784 aa4.61□□□□□ -1.67
SCARNA18-201ENST00000459004 CCDC103Q8IW40 242 aa4.61□□□□□ -1.67
SCARNA18-201ENST00000459004 ZBTB38Q8NAP3 1195 aaPredicted RBP4.61□□□□□ -1.67
SCARNA18-201ENST00000459004 RCBTB1Q8NDN9 531 aa4.61□□□□□ -1.67
SCARNA18-201ENST00000459004 USP33Q8TEY7 942 aa4.61□□□□□ -1.67
SCARNA18-201ENST00000459004 DPF3Q92784 378 aa4.61□□□□□ -1.67
SCARNA18-201ENST00000459004 OSBP2Q969R2 916 aa4.61□□□□□ -1.67
SCARNA18-201ENST00000459004 IPO9Q96P70 1041 aaKnown RBP4.61□□□□□ -1.67
SCARNA18-201ENST00000459004 SIRT5Q9NXA8 310 aa4.61□□□□□ -1.67
SCARNA18-201ENST00000459004 NPFFR2Q9Y5X5 522 aa4.61□□□□□ -1.67
SCARNA18-201ENST00000459004 NFIBO00712 420 aa4.6□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms