RNA–Protein interactions for RNA: ENST00000458530.1

VPS50-207, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 4

Gene VPS50, Length 667 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-207ENST00000458530 A0A1W2PQ27 194 aa10.22□□□□□ -0.77
VPS50-207ENST00000458530 A0A1W2PQ64 194 aa10.22□□□□□ -0.77
VPS50-207ENST00000458530 A0A1W2PQD8 194 aa10.22□□□□□ -0.77
VPS50-207ENST00000458530 TRIM75PA6NK02 468 aa10.22□□□□□ -0.77
VPS50-207ENST00000458530 BTBD18B2RXH4 712 aa10.22□□□□□ -0.77
VPS50-207ENST00000458530 PPP6R2O75170 966 aa10.22□□□□□ -0.77
VPS50-207ENST00000458530 BMP3P12645 472 aa10.22□□□□□ -0.77
VPS50-207ENST00000458530 IKQ13123 557 aaPredicted RBP10.22□□□□□ -0.77
VPS50-207ENST00000458530 MMRN1Q13201 1228 aa10.22□□□□□ -0.77
VPS50-207ENST00000458530 ARHGEF6Q15052 776 aa10.22□□□□□ -0.77
VPS50-207ENST00000458530 MCTP2Q6DN12 878 aa10.22□□□□□ -0.77
VPS50-207ENST00000458530 PPP1R3FQ6ZSY5 799 aaPredicted RBP10.22□□□□□ -0.77
VPS50-207ENST00000458530 HOMER1Q86YM7 354 aa10.22□□□□□ -0.77
VPS50-207ENST00000458530 CLEC10AQ8IUN9 316 aa10.22□□□□□ -0.77
VPS50-207ENST00000458530 BLIDQ8IZY5 108 aa10.22□□□□□ -0.77
VPS50-207ENST00000458530 LINC00301Q8NCQ3 95 aa10.22□□□□□ -0.77
VPS50-207ENST00000458530 PIBF1Q8WXW3 757 aa10.22□□□□□ -0.77
VPS50-207ENST00000458530 CHAMP1Q96JM3 812 aa10.22□□□□□ -0.77
VPS50-207ENST00000458530 TEPSINQ96N21 525 aa10.22□□□□□ -0.77
VPS50-207ENST00000458530 FEZ1Q99689 392 aa10.22□□□□□ -0.77
VPS50-207ENST00000458530 CRISPLD2Q9H0B8 497 aa10.22□□□□□ -0.77
VPS50-207ENST00000458530 GZF1Q9H116 711 aaPredicted RBP10.22□□□□□ -0.77
VPS50-207ENST00000458530 AS3MTQ9HBK9 375 aa10.22□□□□□ -0.77
VPS50-207ENST00000458530 GPCPD1Q9NPB8 672 aa10.22□□□□□ -0.77
VPS50-207ENST00000458530 GJB4Q9NTQ9 266 aa10.22□□□□□ -0.77
VPS50-207ENST00000458530 TMX2Q9Y320 296 aa10.22□□□□□ -0.77
VPS50-207ENST00000458530 hCG_1642624A0A1W2PR95 340 aa10.21□□□□□ -0.77
VPS50-207ENST00000458530 F5H6K3 240 aa10.21□□□□□ -0.77
VPS50-207ENST00000458530 STXBP3O00186 592 aa10.21□□□□□ -0.77
VPS50-207ENST00000458530 ZBTB5O15062 677 aa10.21□□□□□ -0.77
VPS50-207ENST00000458530 CYTH3O43739 400 aa10.21□□□□□ -0.77
VPS50-207ENST00000458530 GADD45BO75293 160 aaPredicted RBP10.21□□□□□ -0.77
VPS50-207ENST00000458530 NDUFB10O96000 172 aa10.21□□□□□ -0.77
VPS50-207ENST00000458530 GNRH1P01148 92 aa10.21□□□□□ -0.77
VPS50-207ENST00000458530 ADCY7P51828 1080 aa10.21□□□□□ -0.77
VPS50-207ENST00000458530 CEBPZQ03701 1054 aaKnown RBP10.21□□□□□ -0.77
VPS50-207ENST00000458530 KLRC3Q07444 240 aa10.21□□□□□ -0.77
VPS50-207ENST00000458530 SLC39A14Q15043 492 aa10.21□□□□□ -0.77
VPS50-207ENST00000458530 L1TD1Q5T7N2 865 aaKnown RBP10.21□□□□□ -0.77
VPS50-207ENST00000458530 WWC2Q6AWC2 1192 aa10.21□□□□□ -0.77
VPS50-207ENST00000458530 ADALQ6DHV7 355 aa10.21□□□□□ -0.77
VPS50-207ENST00000458530 KRT25Q7Z3Z0 450 aa10.21□□□□□ -0.77
VPS50-207ENST00000458530 FAM160B2Q86V87 743 aa10.21□□□□□ -0.77
VPS50-207ENST00000458530 ZNF687Q8N1G0 1237 aa10.21□□□□□ -0.77
VPS50-207ENST00000458530 FAM43AQ8N2R8 423 aa10.21□□□□□ -0.77
VPS50-207ENST00000458530 SLC17A8Q8NDX2 589 aa10.21□□□□□ -0.77
VPS50-207ENST00000458530 CHURC1Q8WUH1 139 aa10.21□□□□□ -0.77
VPS50-207ENST00000458530 MRPS27Q92552 414 aaKnown RBP10.21□□□□□ -0.77
VPS50-207ENST00000458530 LPAR1Q92633 364 aa10.21□□□□□ -0.77
VPS50-207ENST00000458530 OPTNQ96CV9 577 aa10.21□□□□□ -0.77
VPS50-207ENST00000458530 ZMYND12Q9H0C1 365 aa10.21□□□□□ -0.77
VPS50-207ENST00000458530 VCPKMTQ9H867 229 aa10.21□□□□□ -0.77
VPS50-207ENST00000458530 ZCCHC17Q9NP64 241 aaKnown RBP10.21□□□□□ -0.77
VPS50-207ENST00000458530 PICK1Q9NRD5 415 aa10.21□□□□□ -0.77
VPS50-207ENST00000458530 PHIPQ8WWQ0 1821 aa10.21□□□□□ -0.78
VPS50-207ENST00000458530 ZSWIM8A7E2V4 1837 aa10.2□□□□□ -0.78
VPS50-207ENST00000458530 TLR2O60603 784 aa10.2□□□□□ -0.78
VPS50-207ENST00000458530 PLA2G6O60733 806 aa10.2□□□□□ -0.78
VPS50-207ENST00000458530 STAT2P52630 851 aa10.2□□□□□ -0.78
VPS50-207ENST00000458530 GTF2A2P52657 109 aa10.2□□□□□ -0.78
VPS50-207ENST00000458530 USP14P54578 494 aa10.2□□□□□ -0.78
VPS50-207ENST00000458530 PRMT2P55345 433 aa10.2□□□□□ -0.78
VPS50-207ENST00000458530 ZNF445P59923 1031 aa10.2□□□□□ -0.78
VPS50-207ENST00000458530 LACTBP83111 547 aaPredicted RBP10.2□□□□□ -0.78
VPS50-207ENST00000458530 ORC2Q13416 577 aaPredicted RBP10.2□□□□□ -0.78
VPS50-207ENST00000458530 TAF1CQ15572 869 aaPredicted RBP10.2□□□□□ -0.78
VPS50-207ENST00000458530 ZSCAN23Q3MJ62 389 aa10.2□□□□□ -0.78
VPS50-207ENST00000458530 PARP14Q460N5 1801 aa10.2□□□□□ -0.78
VPS50-207ENST00000458530 SYDE2Q5VT97 1194 aa10.2□□□□□ -0.78
VPS50-207ENST00000458530 BTNL9Q6UXG8 535 aa10.2□□□□□ -0.78
VPS50-207ENST00000458530 KCTD1Q719H9 257 aa10.2□□□□□ -0.78
VPS50-207ENST00000458530 MIGA2Q7L4E1 593 aa10.2□□□□□ -0.78
VPS50-207ENST00000458530 ADGRF4Q8IZF3 695 aa10.2□□□□□ -0.78
VPS50-207ENST00000458530 REXO1Q8N1G1 1221 aaKnown RBP10.2□□□□□ -0.78
VPS50-207ENST00000458530 SH3TC2Q8TF17 1288 aa10.2□□□□□ -0.78
VPS50-207ENST00000458530 GPKOWQ92917 476 aaPredicted RBP eCLIP10.2□□□□□ -0.78
VPS50-207ENST00000458530 MTMR8Q96EF0 704 aa10.2□□□□□ -0.78
VPS50-207ENST00000458530 PIGSQ96S52 555 aa10.2□□□□□ -0.78
VPS50-207ENST00000458530 ARHGAP39Q9C0H5 1083 aa10.2□□□□□ -0.78
VPS50-207ENST00000458530 NUP62CLQ9H1M0 184 aa10.2□□□□□ -0.78
VPS50-207ENST00000458530 ZFYVE28Q9HCC9 887 aa10.2□□□□□ -0.78
VPS50-207ENST00000458530 VAT1LQ9HCJ6 419 aa10.2□□□□□ -0.78
VPS50-207ENST00000458530 EIF4ENIF1Q9NRA8 985 aaKnown RBP10.2□□□□□ -0.78
VPS50-207ENST00000458530 PNMA2Q9UL42 364 aa10.2□□□□□ -0.78
VPS50-207ENST00000458530 CLIC4Q9Y696 253 aa10.2□□□□□ -0.78
VPS50-207ENST00000458530 ADGRA2Q96PE1 1338 aa10.19□□□□□ -0.78
VPS50-207ENST00000458530 CCL15-CCL14A0A0B4J2E2 113 aa10.19□□□□□ -0.78
VPS50-207ENST00000458530 GOLGA6L3A6NEY3 463 aa10.19□□□□□ -0.78
VPS50-207ENST00000458530 SMCO2A6NFE2 343 aa10.19□□□□□ -0.78
VPS50-207ENST00000458530 PHF20L1A8MW92 1017 aa10.19□□□□□ -0.78
VPS50-207ENST00000458530 SOX1O00570 391 aaPredicted RBP10.19□□□□□ -0.78
VPS50-207ENST00000458530 CTAGE5O15320 804 aa10.19□□□□□ -0.78
VPS50-207ENST00000458530 KINO60870 393 aaKnown RBP10.19□□□□□ -0.78
VPS50-207ENST00000458530 CUTAO60888 179 aa10.19□□□□□ -0.78
VPS50-207ENST00000458530 CTGFP29279 349 aa10.19□□□□□ -0.78
VPS50-207ENST00000458530 GJA8P48165 433 aa10.19□□□□□ -0.78
VPS50-207ENST00000458530 MRPL12P52815 198 aaKnown RBP10.19□□□□□ -0.78
VPS50-207ENST00000458530 FAM160A1Q05DH4 1040 aa10.19□□□□□ -0.78
VPS50-207ENST00000458530 NR5A1Q13285 461 aa10.19□□□□□ -0.78
VPS50-207ENST00000458530 VGLL4Q14135 290 aa10.19□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms