RNA–Protein interactions for RNA: ENST00000457942.1

CHCHD3-204, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 3, humanhuman

TSL 4

Gene CHCHD3, Length 559 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD3-204ENST00000457942 LRRC37A2A6NM11 1700 aa18.51■□□□□ 0.55
CHCHD3-204ENST00000457942 NEDD4P46934 1319 aa18.5■□□□□ 0.55
CHCHD3-204ENST00000457942 UMODL1Q5DID0 1318 aa18.5■□□□□ 0.55
CHCHD3-204ENST00000457942 MROH7Q68CQ1 1323 aa18.5■□□□□ 0.55
CHCHD3-204ENST00000457942 NOVP48745 357 aa18.5■□□□□ 0.55
CHCHD3-204ENST00000457942 PCSK9Q8NBP7 692 aaKnown RBP18.5■□□□□ 0.55
CHCHD3-204ENST00000457942 FAM122AQ96E09 287 aa18.5■□□□□ 0.55
CHCHD3-204ENST00000457942 ZKSCAN3Q9BRR0 538 aa18.5■□□□□ 0.55
CHCHD3-204ENST00000457942 RANBP17Q9H2T7 1088 aaKnown RBP18.5■□□□□ 0.55
CHCHD3-204ENST00000457942 MSRAQ9UJ68 235 aa18.5■□□□□ 0.55
CHCHD3-204ENST00000457942 A0A0U1RQG5 324 aaPredicted RBP18.49■□□□□ 0.55
CHCHD3-204ENST00000457942 SOWAHBA6NEL2 793 aa18.49■□□□□ 0.55
CHCHD3-204ENST00000457942 PDHBP11177 359 aa18.49■□□□□ 0.55
CHCHD3-204ENST00000457942 RABGGTBP53611 331 aa18.49■□□□□ 0.55
CHCHD3-204ENST00000457942 BEX3Q00994 111 aa18.49■□□□□ 0.55
CHCHD3-204ENST00000457942 TNFAIP2Q03169 654 aa18.49■□□□□ 0.55
CHCHD3-204ENST00000457942 TFF2Q03403 129 aa18.49■□□□□ 0.55
CHCHD3-204ENST00000457942 GNASQ5JWF2 1037 aa18.49■□□□□ 0.55
CHCHD3-204ENST00000457942 RASIP1Q5U651 963 aa18.49■□□□□ 0.55
CHCHD3-204ENST00000457942 FAM126BQ8IXS8 530 aa18.49■□□□□ 0.55
CHCHD3-204ENST00000457942 CYP39A1Q9NYL5 469 aa18.49■□□□□ 0.55
CHCHD3-204ENST00000457942 PTPDC1A2A3K4 754 aa18.48■□□□□ 0.55
CHCHD3-204ENST00000457942 ARVCFO00192 962 aa18.48■□□□□ 0.55
CHCHD3-204ENST00000457942 TLR3O15455 904 aaKnown RBP18.48■□□□□ 0.55
CHCHD3-204ENST00000457942 PTGS1P23219 599 aa18.48■□□□□ 0.55
CHCHD3-204ENST00000457942 RAB30Q15771 203 aa18.48■□□□□ 0.55
CHCHD3-204ENST00000457942 BTNL9Q6UXG8 535 aa18.48■□□□□ 0.55
CHCHD3-204ENST00000457942 EEPD1Q7L9B9 569 aa18.48■□□□□ 0.55
CHCHD3-204ENST00000457942 OTOP2Q7RTS6 562 aa18.48■□□□□ 0.55
CHCHD3-204ENST00000457942 IQCA1Q86XH1 822 aa18.48■□□□□ 0.55
CHCHD3-204ENST00000457942 TTC14Q96N46 770 aa18.48■□□□□ 0.55
CHCHD3-204ENST00000457942 SLC28A3Q9HAS3 691 aa18.48■□□□□ 0.55
CHCHD3-204ENST00000457942 LCTP09848 1927 aa18.48■□□□□ 0.55
CHCHD3-204ENST00000457942 ELP1O95163 1332 aa18.48■□□□□ 0.55
CHCHD3-204ENST00000457942 C11orf97A0A1B0GVM6 126 aaPredicted RBP18.47■□□□□ 0.55
CHCHD3-204ENST00000457942 KDM4AO75164 1064 aa18.47■□□□□ 0.55
CHCHD3-204ENST00000457942 MYOGP15173 224 aa18.47■□□□□ 0.55
CHCHD3-204ENST00000457942 CST5P28325 142 aaPredicted RBP18.47■□□□□ 0.55
CHCHD3-204ENST00000457942 CDK7P50613 346 aa18.47■□□□□ 0.55
CHCHD3-204ENST00000457942 CCL23P55773 120 aa18.47■□□□□ 0.55
CHCHD3-204ENST00000457942 GJA9P57773 515 aa18.47■□□□□ 0.55
CHCHD3-204ENST00000457942 ZNF543Q08ER8 600 aa18.47■□□□□ 0.55
CHCHD3-204ENST00000457942 SKIV2LQ15477 1246 aaKnown RBP18.47■□□□□ 0.55
CHCHD3-204ENST00000457942 IMMTQ16891 758 aaKnown RBP18.47■□□□□ 0.55
CHCHD3-204ENST00000457942 FBXO16Q8IX29 292 aaPredicted RBP18.47■□□□□ 0.55
CHCHD3-204ENST00000457942 UPF3AQ9H1J1 476 aaKnown RBP18.47■□□□□ 0.55
CHCHD3-204ENST00000457942 IL23AQ9NPF7 189 aa18.47■□□□□ 0.55
CHCHD3-204ENST00000457942 ADD3Q9UEY8 706 aaKnown RBP18.47■□□□□ 0.55
CHCHD3-204ENST00000457942 DDX49Q9Y6V7 483 aaKnown RBP18.47■□□□□ 0.55
CHCHD3-204ENST00000457942 KCNQ1P51787 676 aa18.46■□□□□ 0.55
CHCHD3-204ENST00000457942 IRX6P78412 446 aaPredicted RBP18.46■□□□□ 0.55
CHCHD3-204ENST00000457942 BAATQ14032 418 aaPredicted RBP18.46■□□□□ 0.55
CHCHD3-204ENST00000457942 CCDC178Q5BJE1 867 aa18.46■□□□□ 0.55
CHCHD3-204ENST00000457942 PPP2R2DQ66LE6 453 aa18.46■□□□□ 0.55
CHCHD3-204ENST00000457942 TLK2Q86UE8 772 aa18.46■□□□□ 0.55
CHCHD3-204ENST00000457942 DSCC1Q9BVC3 393 aa18.46■□□□□ 0.55
CHCHD3-204ENST00000457942 KATNBL1Q9H079 304 aa18.46■□□□□ 0.55
CHCHD3-204ENST00000457942 AP5M1Q9H0R1 490 aa18.46■□□□□ 0.55
CHCHD3-204ENST00000457942 KAT14Q9H8E8 782 aa18.46■□□□□ 0.55
CHCHD3-204ENST00000457942 CTNNA3Q9UI47 895 aa18.46■□□□□ 0.55
CHCHD3-204ENST00000457942 PNMA2Q9UL42 364 aa18.46■□□□□ 0.55
CHCHD3-204ENST00000457942 TCF20Q9UGU0 1960 aaKnown RBP18.45■□□□□ 0.54
CHCHD3-204ENST00000457942 ZBBXA8MT70 800 aa18.45■□□□□ 0.54
CHCHD3-204ENST00000457942 B4E1Z4 1266 aa18.45■□□□□ 0.54
CHCHD3-204ENST00000457942 NFIBO00712 420 aa18.45■□□□□ 0.54
CHCHD3-204ENST00000457942 GOLGA8HP0CJ92 632 aa18.45■□□□□ 0.54
CHCHD3-204ENST00000457942 CALML3P27482 149 aa18.45■□□□□ 0.54
CHCHD3-204ENST00000457942 GPATCH4Q5T3I0 446 aaKnown RBP18.45■□□□□ 0.54
CHCHD3-204ENST00000457942 CXCL17Q6UXB2 119 aa18.45■□□□□ 0.54
CHCHD3-204ENST00000457942 PURBQ96QR8 312 aaKnown RBP18.45■□□□□ 0.54
CHCHD3-204ENST00000457942 HIPK3Q9H422 1215 aa18.45■□□□□ 0.54
CHCHD3-204ENST00000457942 DHX16O60231 1041 aaKnown RBP18.44■□□□□ 0.54
CHCHD3-204ENST00000457942 FGBP02675 491 aa18.44■□□□□ 0.54
CHCHD3-204ENST00000457942 NT5C2P49902 561 aa18.44■□□□□ 0.54
CHCHD3-204ENST00000457942 USH1GQ495M9 461 aa18.44■□□□□ 0.54
CHCHD3-204ENST00000457942 SLC30A10Q6XR72 485 aa18.44■□□□□ 0.54
CHCHD3-204ENST00000457942 RNF207Q6ZRF8 634 aa18.44■□□□□ 0.54
CHCHD3-204ENST00000457942 KIAA1211Q6ZU35 1233 aa18.44■□□□□ 0.54
CHCHD3-204ENST00000457942 DGKHQ86XP1 1220 aa18.44■□□□□ 0.54
CHCHD3-204ENST00000457942 PNMA1Q8ND90 353 aa18.44■□□□□ 0.54
CHCHD3-204ENST00000457942 HERVK_113Q902F9 699 aa18.44■□□□□ 0.54
CHCHD3-204ENST00000457942 MTIF3Q9H2K0 278 aaKnown RBP18.44■□□□□ 0.54
CHCHD3-204ENST00000457942 VTA1Q9NP79 307 aa18.44■□□□□ 0.54
CHCHD3-204ENST00000457942 MYH6P13533 1939 aa18.44■□□□□ 0.54
CHCHD3-204ENST00000457942 ASTN1O14525 1302 aa18.44■□□□□ 0.54
CHCHD3-204ENST00000457942 DYNC1LI2O43237 492 aaPredicted RBP18.43■□□□□ 0.54
CHCHD3-204ENST00000457942 ZEB2O60315 1214 aa18.43■□□□□ 0.54
CHCHD3-204ENST00000457942 SNHG28P0DPA3 235 aa18.43■□□□□ 0.54
CHCHD3-204ENST00000457942 SMPD1P17405 629 aa18.43■□□□□ 0.54
CHCHD3-204ENST00000457942 ALDH5A1P51649 535 aaPredicted RBP18.43■□□□□ 0.54
CHCHD3-204ENST00000457942 FSCN1Q16658 493 aaKnown RBP18.43■□□□□ 0.54
CHCHD3-204ENST00000457942 TTC22Q5TAA0 569 aa18.43■□□□□ 0.54
CHCHD3-204ENST00000457942 ZSCAN10Q96SZ4 725 aaPredicted RBP18.43■□□□□ 0.54
CHCHD3-204ENST00000457942 MPHOSPH6Q99547 160 aaKnown RBP18.43■□□□□ 0.54
CHCHD3-204ENST00000457942 UBAC1Q9BSL1 405 aa18.43■□□□□ 0.54
CHCHD3-204ENST00000457942 KRT23Q9C075 422 aa18.43■□□□□ 0.54
CHCHD3-204ENST00000457942 CERS4Q9HA82 394 aa18.43■□□□□ 0.54
CHCHD3-204ENST00000457942 PDGFCQ9NRA1 345 aa18.43■□□□□ 0.54
CHCHD3-204ENST00000457942 TRANK1O15050 2925 aa18.43■□□□□ 0.54
CHCHD3-204ENST00000457942 WDR19Q8NEZ3 1342 aa18.43■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms