RNA–Protein interactions for RNA: ENST00000457035.5

ATG4A-206, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 3

Gene ATG4A, Length 939 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-206ENST00000457035 DNAJC25-GNG10A0A024R161 153 aa11.66□□□□□ -0.54
ATG4A-206ENST00000457035 PNMA6FA0A0J9YX94 578 aa11.66□□□□□ -0.54
ATG4A-206ENST00000457035 MYCP01106 439 aaPredicted RBP11.66□□□□□ -0.54
ATG4A-206ENST00000457035 PGK2P07205 417 aa11.66□□□□□ -0.54
ATG4A-206ENST00000457035 GRK4P32298 578 aa11.66□□□□□ -0.54
ATG4A-206ENST00000457035 METAP2P50579 478 aaKnown RBP eCLIP11.66□□□□□ -0.54
ATG4A-206ENST00000457035 AK2P54819 239 aa11.66□□□□□ -0.54
ATG4A-206ENST00000457035 KCTD2Q14681 263 aa11.66□□□□□ -0.54
ATG4A-206ENST00000457035 ZNF792Q3KQV3 632 aa11.66□□□□□ -0.54
ATG4A-206ENST00000457035 DPP9Q86TI2 863 aa11.66□□□□□ -0.54
ATG4A-206ENST00000457035 FBXO11Q86XK2 927 aa11.66□□□□□ -0.54
ATG4A-206ENST00000457035 CCDC82Q8N4S0 544 aa11.66□□□□□ -0.54
ATG4A-206ENST00000457035 AMNQ9BXJ7 453 aa11.66□□□□□ -0.54
ATG4A-206ENST00000457035 ACAD9Q9H845 621 aa11.66□□□□□ -0.54
ATG4A-206ENST00000457035 A1CFQ9NQ94 594 aaKnown RBP11.66□□□□□ -0.54
ATG4A-206ENST00000457035 NID2Q14112 1375 aa11.66□□□□□ -0.54
ATG4A-206ENST00000457035 GOLGA8AA7E2F4 631 aa11.65□□□□□ -0.54
ATG4A-206ENST00000457035 GOLGA8BA8MQT2 603 aa11.65□□□□□ -0.54
ATG4A-206ENST00000457035 NFIBO00712 420 aa11.65□□□□□ -0.54
ATG4A-206ENST00000457035 ELNP15502 786 aa11.65□□□□□ -0.54
ATG4A-206ENST00000457035 EN2P19622 333 aaPredicted RBP11.65□□□□□ -0.54
ATG4A-206ENST00000457035 CCT2P78371 535 aaKnown RBP11.65□□□□□ -0.54
ATG4A-206ENST00000457035 NTRK3Q16288 839 aa11.65□□□□□ -0.54
ATG4A-206ENST00000457035 CCL14Q16627 93 aa11.65□□□□□ -0.54
ATG4A-206ENST00000457035 USH1GQ495M9 461 aa11.65□□□□□ -0.54
ATG4A-206ENST00000457035 HOMER1Q86YM7 354 aa11.65□□□□□ -0.54
ATG4A-206ENST00000457035 ANKRD35Q8N283 1001 aa11.65□□□□□ -0.54
ATG4A-206ENST00000457035 SLAIN1Q8ND83 568 aa11.65□□□□□ -0.54
ATG4A-206ENST00000457035 RGS22Q8NE09 1264 aa11.65□□□□□ -0.54
ATG4A-206ENST00000457035 SH3TC2Q8TF17 1288 aa11.65□□□□□ -0.54
ATG4A-206ENST00000457035 TRIB2Q92519 343 aa11.65□□□□□ -0.54
ATG4A-206ENST00000457035 TBC1D5Q92609 795 aa11.65□□□□□ -0.54
ATG4A-206ENST00000457035 ARMC5Q96C12 935 aa11.65□□□□□ -0.54
ATG4A-206ENST00000457035 DDX11Q96FC9 970 aa11.65□□□□□ -0.54
ATG4A-206ENST00000457035 TBC1D32Q96NH3 1257 aa11.65□□□□□ -0.54
ATG4A-206ENST00000457035 APBA2Q99767 749 aa11.65□□□□□ -0.54
ATG4A-206ENST00000457035 UPF2Q9HAU5 1272 aaKnown RBP11.65□□□□□ -0.54
ATG4A-206ENST00000457035 CYP39A1Q9NYL5 469 aa11.65□□□□□ -0.54
ATG4A-206ENST00000457035 FLRT1Q9NZU1 646 aa11.65□□□□□ -0.54
ATG4A-206ENST00000457035 TPCN1Q9ULQ1 816 aa11.65□□□□□ -0.54
ATG4A-206ENST00000457035 NAP1L2Q9ULW6 460 aaPredicted RBP11.65□□□□□ -0.54
ATG4A-206ENST00000457035 DIS3Q9Y2L1 958 aaKnown RBP11.65□□□□□ -0.54
ATG4A-206ENST00000457035 ABCB11O95342 1321 aa11.64□□□□□ -0.55
ATG4A-206ENST00000457035 CCDC196A0A1B0GTZ2 297 aa11.64□□□□□ -0.55
ATG4A-206ENST00000457035 OPLAHO14841 1288 aa11.64□□□□□ -0.55
ATG4A-206ENST00000457035 CNTN2Q02246 1040 aa11.64□□□□□ -0.55
ATG4A-206ENST00000457035 ANKRD1Q15327 319 aa11.64□□□□□ -0.55
ATG4A-206ENST00000457035 SLC9C1Q4G0N8 1177 aa11.64□□□□□ -0.55
ATG4A-206ENST00000457035 TRMT44Q8IYL2 757 aaKnown RBP11.64□□□□□ -0.55
ATG4A-206ENST00000457035 FAM133AQ8N9E0 248 aa11.64□□□□□ -0.55
ATG4A-206ENST00000457035 PIBF1Q8WXW3 757 aa11.64□□□□□ -0.55
ATG4A-206ENST00000457035 RRP36Q96EU6 259 aaKnown RBP11.64□□□□□ -0.55
ATG4A-206ENST00000457035 ZNF333Q96JL9 665 aa11.64□□□□□ -0.55
ATG4A-206ENST00000457035 FGD4Q96M96 766 aa11.64□□□□□ -0.55
ATG4A-206ENST00000457035 MAF1Q9H063 256 aa11.64□□□□□ -0.55
ATG4A-206ENST00000457035 NCOA5Q9HCD5 579 aaKnown RBP11.64□□□□□ -0.55
ATG4A-206ENST00000457035 SLC5A4Q9NY91 659 aa11.64□□□□□ -0.55
ATG4A-206ENST00000457035 MRPL11Q9Y3B7 192 aaKnown RBP11.64□□□□□ -0.55
ATG4A-206ENST00000457035 PCDHA1Q9Y5I3 950 aa11.64□□□□□ -0.55
ATG4A-206ENST00000457035 V9GY48 417 aaPredicted RBP11.64□□□□□ -0.55
ATG4A-206ENST00000457035 CNTNAP5Q8WYK1 1306 aa11.63□□□□□ -0.55
ATG4A-206ENST00000457035 hCG_1642624A0A1W2PR95 340 aa11.63□□□□□ -0.55
ATG4A-206ENST00000457035 PFKFB2O60825 505 aa11.63□□□□□ -0.55
ATG4A-206ENST00000457035 RPS6P62753 249 aaKnown RBP11.63□□□□□ -0.55
ATG4A-206ENST00000457035 TRIM32Q13049 653 aa11.63□□□□□ -0.55
ATG4A-206ENST00000457035 BAATQ14032 418 aaPredicted RBP11.63□□□□□ -0.55
ATG4A-206ENST00000457035 ME3Q16798 604 aa11.63□□□□□ -0.55
ATG4A-206ENST00000457035 OLFML2BQ68BL8 750 aa11.63□□□□□ -0.55
ATG4A-206ENST00000457035 NSMFQ6X4W1 530 aa11.63□□□□□ -0.55
ATG4A-206ENST00000457035 MAML3Q96JK9 1138 aa11.63□□□□□ -0.55
ATG4A-206ENST00000457035 PFASO15067 1338 aa11.62□□□□□ -0.55
ATG4A-206ENST00000457035 SOWAHBA6NEL2 793 aa11.62□□□□□ -0.55
ATG4A-206ENST00000457035 PRPF3O43395 683 aaKnown RBP11.62□□□□□ -0.55
ATG4A-206ENST00000457035 HMGCRP04035 888 aa11.62□□□□□ -0.55
ATG4A-206ENST00000457035 IFNAR1P17181 557 aa11.62□□□□□ -0.55
ATG4A-206ENST00000457035 GHRHRQ02643 423 aa11.62□□□□□ -0.55
ATG4A-206ENST00000457035 SCRN1Q12765 414 aa11.62□□□□□ -0.55
ATG4A-206ENST00000457035 TRAF1Q13077 416 aa11.62□□□□□ -0.55
ATG4A-206ENST00000457035 STK3Q13188 491 aa11.62□□□□□ -0.55
ATG4A-206ENST00000457035 RABEP1Q15276 862 aa11.62□□□□□ -0.55
ATG4A-206ENST00000457035 MTFR1Q15390 333 aa11.62□□□□□ -0.55
ATG4A-206ENST00000457035 MAP3K21Q5TCX8 1036 aa11.62□□□□□ -0.55
ATG4A-206ENST00000457035 MAMDC4Q6UXC1 1216 aa11.62□□□□□ -0.55
ATG4A-206ENST00000457035 RNF207Q6ZRF8 634 aa11.62□□□□□ -0.55
ATG4A-206ENST00000457035 EFCAB3Q8N7B9 438 aa11.62□□□□□ -0.55
ATG4A-206ENST00000457035 PURBQ96QR8 312 aaKnown RBP11.62□□□□□ -0.55
ATG4A-206ENST00000457035 PCDH10Q9P2E7 1040 aa11.62□□□□□ -0.55
ATG4A-206ENST00000457035 BIN2Q9UBW5 565 aaPredicted RBP11.62□□□□□ -0.55
ATG4A-206ENST00000457035 SEC63Q9UGP8 760 aaKnown RBP11.62□□□□□ -0.55
ATG4A-206ENST00000457035 ASTN1O14525 1302 aa11.61□□□□□ -0.55
ATG4A-206ENST00000457035 MKI67P46013 3256 aaKnown RBP11.61□□□□□ -0.55
ATG4A-206ENST00000457035 PTPDC1A2A3K4 754 aa11.61□□□□□ -0.55
ATG4A-206ENST00000457035 LARGE1O95461 756 aa11.61□□□□□ -0.55
ATG4A-206ENST00000457035 INHAP05111 366 aa11.61□□□□□ -0.55
ATG4A-206ENST00000457035 CYP2C19P33261 490 aa11.61□□□□□ -0.55
ATG4A-206ENST00000457035 UBXN2AP68543 259 aa11.61□□□□□ -0.55
ATG4A-206ENST00000457035 CACNB2Q08289 660 aaPredicted RBP11.61□□□□□ -0.55
ATG4A-206ENST00000457035 PKN1Q16512 942 aa11.61□□□□□ -0.55
ATG4A-206ENST00000457035 SLC30A10Q6XR72 485 aa11.61□□□□□ -0.55
ATG4A-206ENST00000457035 MCF2L2Q86YR7 1114 aa11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms