RNA–Protein interactions for RNA: ENST00000456246.1

MSH6-207, Transcript of mutS homolog 6, humanhuman

TSL 3

Gene MSH6, Length 846 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-207ENST00000456246 ESYT1Q9BSJ8 1104 aa20.82■□□□□ 0.92
MSH6-207ENST00000456246 MTA3Q9BTC8 594 aa20.82■□□□□ 0.92
MSH6-207ENST00000456246 CPVLQ9H3G5 476 aa20.82■□□□□ 0.92
MSH6-207ENST00000456246 PRDM5Q9NQX1 630 aaPredicted RBP20.82■□□□□ 0.92
MSH6-207ENST00000456246 MRPL11Q9Y3B7 192 aaKnown RBP20.82■□□□□ 0.92
MSH6-207ENST00000456246 LTBP2Q14767 1821 aa20.82■□□□□ 0.92
MSH6-207ENST00000456246 MYH6P13533 1939 aa20.82■□□□□ 0.92
MSH6-207ENST00000456246 MYADML2A6NDP7 307 aa20.81■□□□□ 0.92
MSH6-207ENST00000456246 KLRF2D3W0D1 207 aa20.81■□□□□ 0.92
MSH6-207ENST00000456246 CLTBP09497 229 aa20.81■□□□□ 0.92
MSH6-207ENST00000456246 QRICH1Q2TAL8 776 aa20.81■□□□□ 0.92
MSH6-207ENST00000456246 TAPT1Q6NXT6 567 aa20.81■□□□□ 0.92
MSH6-207ENST00000456246 JMJD4Q9H9V9 463 aa20.81■□□□□ 0.92
MSH6-207ENST00000456246 LAMA3Q16787 3333 aa20.8■□□□□ 0.92
MSH6-207ENST00000456246 A0A0U1RQG5 324 aaPredicted RBP20.8■□□□□ 0.92
MSH6-207ENST00000456246 C11orf97A0A1B0GVM6 126 aaPredicted RBP20.8■□□□□ 0.92
MSH6-207ENST00000456246 PALM3A6NDB9 673 aaPredicted RBP20.8■□□□□ 0.92
MSH6-207ENST00000456246 DCDC2CA8MYV0 355 aa20.8■□□□□ 0.92
MSH6-207ENST00000456246 PQBP1O60828 265 aaKnown RBP20.8■□□□□ 0.92
MSH6-207ENST00000456246 SMPD1P17405 629 aa20.8■□□□□ 0.92
MSH6-207ENST00000456246 EDNRBP24530 442 aa20.8■□□□□ 0.92
MSH6-207ENST00000456246 PDE4DQ08499 809 aa20.8■□□□□ 0.92
MSH6-207ENST00000456246 GPR153Q6NV75 609 aa20.8■□□□□ 0.92
MSH6-207ENST00000456246 EEPD1Q7L9B9 569 aa20.8■□□□□ 0.92
MSH6-207ENST00000456246 PURBQ96QR8 312 aaKnown RBP20.8■□□□□ 0.92
MSH6-207ENST00000456246 AMNQ9BXJ7 453 aa20.8■□□□□ 0.92
MSH6-207ENST00000456246 SEZ6LQ9BYH1 1024 aa20.8■□□□□ 0.92
MSH6-207ENST00000456246 MAD2L2Q9UI95 211 aa20.8■□□□□ 0.92
MSH6-207ENST00000456246 CTAGE5O15320 804 aa20.79■□□□□ 0.92
MSH6-207ENST00000456246 GRM4Q14833 912 aa20.79■□□□□ 0.92
MSH6-207ENST00000456246 FSCN1Q16658 493 aaKnown RBP20.79■□□□□ 0.92
MSH6-207ENST00000456246 DUSP28Q4G0W2 176 aa20.79■□□□□ 0.92
MSH6-207ENST00000456246 TMEM67Q5HYA8 995 aa20.79■□□□□ 0.92
MSH6-207ENST00000456246 CASC1Q6TDU7 716 aa20.79■□□□□ 0.92
MSH6-207ENST00000456246 STOX1Q6ZVD7 989 aa20.79■□□□□ 0.92
MSH6-207ENST00000456246 CATIPQ7Z7H3 387 aa20.79■□□□□ 0.92
MSH6-207ENST00000456246 MB21D2Q8IYB1 491 aaPredicted RBP20.79■□□□□ 0.92
MSH6-207ENST00000456246 STAG2Q8N3U4 1231 aa20.79■□□□□ 0.92
MSH6-207ENST00000456246 MTMR8Q96EF0 704 aa20.79■□□□□ 0.92
MSH6-207ENST00000456246 LSG1Q9H089 658 aaKnown RBP20.79■□□□□ 0.92
MSH6-207ENST00000456246 PDGFCQ9NRA1 345 aa20.79■□□□□ 0.92
MSH6-207ENST00000456246 RBM47A0AV96 593 aaKnown RBP20.78■□□□□ 0.92
MSH6-207ENST00000456246 ZBTB5O15062 677 aa20.78■□□□□ 0.92
MSH6-207ENST00000456246 KIAA0355O15063 1070 aa20.78■□□□□ 0.92
MSH6-207ENST00000456246 NKRFO15226 690 aaKnown RBP eCLIP20.78■□□□□ 0.92
MSH6-207ENST00000456246 DYNC1LI2O43237 492 aaPredicted RBP20.78■□□□□ 0.92
MSH6-207ENST00000456246 SAMD3Q8N6K7 520 aa20.78■□□□□ 0.92
MSH6-207ENST00000456246 SCFD2Q8WU76 684 aa20.78■□□□□ 0.92
MSH6-207ENST00000456246 VTI1AQ96AJ9 217 aa20.78■□□□□ 0.92
MSH6-207ENST00000456246 WDR11Q9BZH6 1224 aa20.78■□□□□ 0.92
MSH6-207ENST00000456246 VAT1LQ9HCJ6 419 aa20.78■□□□□ 0.92
MSH6-207ENST00000456246 MAP3K20Q9NYL2 800 aaKnown RBP20.78■□□□□ 0.92
MSH6-207ENST00000456246 TAF6LQ9Y6J9 622 aa20.78■□□□□ 0.92
MSH6-207ENST00000456246 ARVCFO00192 962 aa20.77■□□□□ 0.92
MSH6-207ENST00000456246 CDK7P50613 346 aa20.77■□□□□ 0.92
MSH6-207ENST00000456246 TROAPQ12815 778 aa20.77■□□□□ 0.92
MSH6-207ENST00000456246 TMTC2Q8N394 836 aa20.77■□□□□ 0.92
MSH6-207ENST00000456246 NSUN6Q8TEA1 469 aaKnown RBP20.77■□□□□ 0.92
MSH6-207ENST00000456246 MAP3K14Q99558 947 aa20.77■□□□□ 0.92
MSH6-207ENST00000456246 ANO2Q9NQ90 1003 aa20.77■□□□□ 0.92
MSH6-207ENST00000456246 TMEM39AQ9NV64 488 aa20.77■□□□□ 0.92
MSH6-207ENST00000456246 DDX49Q9Y6V7 483 aaKnown RBP20.77■□□□□ 0.92
MSH6-207ENST00000456246 TRIM43BA6NCK2 446 aa20.76■□□□□ 0.91
MSH6-207ENST00000456246 TLR3O15455 904 aaKnown RBP20.76■□□□□ 0.91
MSH6-207ENST00000456246 RAG1P15918 1043 aa20.76■□□□□ 0.91
MSH6-207ENST00000456246 MCM5P33992 734 aa20.76■□□□□ 0.91
MSH6-207ENST00000456246 CPT1AP50416 773 aa20.76■□□□□ 0.91
MSH6-207ENST00000456246 BEX3Q00994 111 aa20.76■□□□□ 0.91
MSH6-207ENST00000456246 GHRHRQ02643 423 aa20.76■□□□□ 0.91
MSH6-207ENST00000456246 PPP2R5BQ15173 497 aa20.76■□□□□ 0.91
MSH6-207ENST00000456246 BRDTQ58F21 947 aaPredicted RBP20.76■□□□□ 0.91
MSH6-207ENST00000456246 RNF20Q5VTR2 975 aa20.76■□□□□ 0.91
MSH6-207ENST00000456246 SH3RF1Q7Z6J0 888 aa20.76■□□□□ 0.91
MSH6-207ENST00000456246 SYTL5Q8TDW5 730 aaPredicted RBP20.76■□□□□ 0.91
MSH6-207ENST00000456246 IGDCC4Q8TDY8 1250 aa20.76■□□□□ 0.91
MSH6-207ENST00000456246 TRIM43Q96BQ3 446 aaPredicted RBP20.76■□□□□ 0.91
MSH6-207ENST00000456246 TMEM87BQ96K49 555 aa20.76■□□□□ 0.91
MSH6-207ENST00000456246 IWS1Q96ST2 819 aa20.76■□□□□ 0.91
MSH6-207ENST00000456246 RIOX1Q9H6W3 641 aa20.76■□□□□ 0.91
MSH6-207ENST00000456246 SOX1O00570 391 aaPredicted RBP20.75■□□□□ 0.91
MSH6-207ENST00000456246 DDAH1O94760 285 aa20.75■□□□□ 0.91
MSH6-207ENST00000456246 ANTXR2P58335 489 aa20.75■□□□□ 0.91
MSH6-207ENST00000456246 IRX5P78411 483 aaPredicted RBP20.75■□□□□ 0.91
MSH6-207ENST00000456246 FAAP100Q0VG06 881 aa20.75■□□□□ 0.91
MSH6-207ENST00000456246 BADQ92934 168 aa20.75■□□□□ 0.91
MSH6-207ENST00000456246 CCDC136Q96JN2 1154 aa20.75■□□□□ 0.91
MSH6-207ENST00000456246 POLR3EQ9NVU0 708 aa20.75■□□□□ 0.91
MSH6-207ENST00000456246 SLC27A2O14975 620 aa20.74■□□□□ 0.91
MSH6-207ENST00000456246 KIF5BP33176 963 aa20.74■□□□□ 0.91
MSH6-207ENST00000456246 TTLL4Q14679 1199 aa20.74■□□□□ 0.91
MSH6-207ENST00000456246 NECTIN1Q15223 517 aa20.74■□□□□ 0.91
MSH6-207ENST00000456246 CREB3L3Q68CJ9 461 aa20.74■□□□□ 0.91
MSH6-207ENST00000456246 CXCL17Q6UXB2 119 aa20.74■□□□□ 0.91
MSH6-207ENST00000456246 CHST3Q7LGC8 479 aa20.74■□□□□ 0.91
MSH6-207ENST00000456246 CTCFLQ8NI51 663 aaPredicted RBP20.74■□□□□ 0.91
MSH6-207ENST00000456246 RMDN3Q96TC7 470 aa20.74■□□□□ 0.91
MSH6-207ENST00000456246 PCDHA1Q9Y5I3 950 aa20.74■□□□□ 0.91
MSH6-207ENST00000456246 SZT2Q5T011 3432 aa20.73■□□□□ 0.91
MSH6-207ENST00000456246 PRC1O43663 620 aa20.73■□□□□ 0.91
MSH6-207ENST00000456246 CDC45O75419 566 aa20.73■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 64.8 ms