RNA–Protein interactions for RNA: ENST00000455939.1

LINC00161-202, long intergenic non-protein coding RNA 161, humanhuman

TSL 2

Gene LINC00161, Length 514 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00161-202ENST00000455939 NUP43Q8NFH3 380 aa7.41□□□□□ -1.22
LINC00161-202ENST00000455939 PLCD4Q9BRC7 762 aa7.41□□□□□ -1.22
LINC00161-202ENST00000455939 GPRC5CQ9NQ84 441 aa7.41□□□□□ -1.22
LINC00161-202ENST00000455939 CYP26B1Q9NR63 512 aa7.41□□□□□ -1.22
LINC00161-202ENST00000455939 CLEC1BQ9P126 229 aa7.41□□□□□ -1.22
LINC00161-202ENST00000455939 IMPACTQ9P2X3 320 aa7.41□□□□□ -1.22
LINC00161-202ENST00000455939 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.41□□□□□ -1.22
LINC00161-202ENST00000455939 TDRD9Q8NDG6 1382 aaKnown RBP7.41□□□□□ -1.22
LINC00161-202ENST00000455939 A0A1W2PQU0 124 aa7.4□□□□□ -1.22
LINC00161-202ENST00000455939 LRRC10BA6NIK2 292 aa7.4□□□□□ -1.22
LINC00161-202ENST00000455939 EFEMP2O95967 443 aa7.4□□□□□ -1.22
LINC00161-202ENST00000455939 THBDP07204 575 aa7.4□□□□□ -1.22
LINC00161-202ENST00000455939 PDE6BP35913 854 aa7.4□□□□□ -1.22
LINC00161-202ENST00000455939 PPP2R2AP63151 447 aa7.4□□□□□ -1.22
LINC00161-202ENST00000455939 IFRD2Q12894 506 aaPredicted RBP7.4□□□□□ -1.22
LINC00161-202ENST00000455939 KIR3DS1Q14943 382 aa7.4□□□□□ -1.22
LINC00161-202ENST00000455939 MLANAQ16655 118 aa7.4□□□□□ -1.22
LINC00161-202ENST00000455939 NLRX1Q86UT6 975 aa7.4□□□□□ -1.22
LINC00161-202ENST00000455939 CPNE8Q86YQ8 564 aa7.4□□□□□ -1.22
LINC00161-202ENST00000455939 UBXN4Q92575 508 aa7.4□□□□□ -1.22
LINC00161-202ENST00000455939 SRPK1Q96SB4 655 aaKnown RBP7.4□□□□□ -1.22
LINC00161-202ENST00000455939 DIRC2Q96SL1 478 aa7.4□□□□□ -1.22
LINC00161-202ENST00000455939 CCDC113Q9H0I3 377 aa7.4□□□□□ -1.22
LINC00161-202ENST00000455939 SLC6A17Q9H1V8 727 aa7.4□□□□□ -1.22
LINC00161-202ENST00000455939 PFDN2Q9UHV9 154 aa7.4□□□□□ -1.22
LINC00161-202ENST00000455939 MSRB2Q9Y3D2 182 aa7.4□□□□□ -1.22
LINC00161-202ENST00000455939 RAD54L2Q9Y4B4 1467 aa7.4□□□□□ -1.22
LINC00161-202ENST00000455939 SHROOM2Q13796 1616 aa7.4□□□□□ -1.22
LINC00161-202ENST00000455939 A0A1W2PQJ5 194 aa7.39□□□□□ -1.23
LINC00161-202ENST00000455939 BTBD11A6QL63 1104 aa7.39□□□□□ -1.23
LINC00161-202ENST00000455939 PLS3P13797 630 aa7.39□□□□□ -1.23
LINC00161-202ENST00000455939 HOXC12P31275 282 aa7.39□□□□□ -1.23
LINC00161-202ENST00000455939 L1CAMP32004 1257 aa7.39□□□□□ -1.23
LINC00161-202ENST00000455939 ARL4AP40617 200 aa7.39□□□□□ -1.23
LINC00161-202ENST00000455939 SERINC3Q13530 473 aa7.39□□□□□ -1.23
LINC00161-202ENST00000455939 RASGRF1Q13972 1273 aa7.39□□□□□ -1.23
LINC00161-202ENST00000455939 ADGRF1Q5T601 910 aa7.39□□□□□ -1.23
LINC00161-202ENST00000455939 SPATC1Q76KD6 591 aa7.39□□□□□ -1.23
LINC00161-202ENST00000455939 LRRC47Q8N1G4 583 aaKnown RBP7.39□□□□□ -1.23
LINC00161-202ENST00000455939 COPS5Q92905 334 aa7.39□□□□□ -1.23
LINC00161-202ENST00000455939 INTS4Q96HW7 963 aaKnown RBP7.39□□□□□ -1.23
LINC00161-202ENST00000455939 DEPDC7Q96QD5 511 aa7.39□□□□□ -1.23
LINC00161-202ENST00000455939 FAM53CQ9NYF3 392 aa7.39□□□□□ -1.23
LINC00161-202ENST00000455939 YBX2Q9Y2T7 364 aaKnown RBP7.39□□□□□ -1.23
LINC00161-202ENST00000455939 TRBV23OR9-2A0A075B6M9 112 aa7.38□□□□□ -1.23
LINC00161-202ENST00000455939 KRTAP4-8A0A0G2JLE6 195 aa7.38□□□□□ -1.23
LINC00161-202ENST00000455939 IQCJ-SCHIP1C9J366 451 aaPredicted RBP7.38□□□□□ -1.23
LINC00161-202ENST00000455939 GRIA2P42262 883 aa7.38□□□□□ -1.23
LINC00161-202ENST00000455939 CEBPAP49715 358 aaPredicted RBP7.38□□□□□ -1.23
LINC00161-202ENST00000455939 CYP4F8P98187 520 aa7.38□□□□□ -1.23
LINC00161-202ENST00000455939 HSP90AA2PQ14568 343 aaPredicted RBP7.38□□□□□ -1.23
LINC00161-202ENST00000455939 SF1Q15637 639 aaKnown RBP7.38□□□□□ -1.23
LINC00161-202ENST00000455939 PRSS53Q2L4Q9 553 aa7.38□□□□□ -1.23
LINC00161-202ENST00000455939 PRR23BQ6ZRT6 265 aa7.38□□□□□ -1.23
LINC00161-202ENST00000455939 SHISA4Q96DD7 197 aa7.38□□□□□ -1.23
LINC00161-202ENST00000455939 SGSM3Q96HU1 749 aa7.38□□□□□ -1.23
LINC00161-202ENST00000455939 IER2Q9BTL4 223 aa7.38□□□□□ -1.23
LINC00161-202ENST00000455939 OSBPL2Q9H1P3 480 aa7.38□□□□□ -1.23
LINC00161-202ENST00000455939 NSUN3Q9H649 340 aaKnown RBP7.38□□□□□ -1.23
LINC00161-202ENST00000455939 SNTG2Q9NY99 539 aa7.38□□□□□ -1.23
LINC00161-202ENST00000455939 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP7.38□□□□□ -1.23
LINC00161-202ENST00000455939 PPRC1Q5VV67 1664 aaKnown RBP7.38□□□□□ -1.23
LINC00161-202ENST00000455939 CPP00450 1065 aa7.37□□□□□ -1.23
LINC00161-202ENST00000455939 SDHBP21912 280 aa7.37□□□□□ -1.23
LINC00161-202ENST00000455939 TACR1P25103 407 aa7.37□□□□□ -1.23
LINC00161-202ENST00000455939 SSRP1Q08945 709 aaKnown RBP7.37□□□□□ -1.23
LINC00161-202ENST00000455939 RASA3Q14644 834 aa7.37□□□□□ -1.23
LINC00161-202ENST00000455939 CCDC140Q96MF4 163 aa7.37□□□□□ -1.23
LINC00161-202ENST00000455939 AARSD1Q9BTE6 412 aaKnown RBP7.37□□□□□ -1.23
LINC00161-202ENST00000455939 CRTAC1Q9NQ79 661 aa7.37□□□□□ -1.23
LINC00161-202ENST00000455939 USP35Q9P2H5 1018 aa7.37□□□□□ -1.23
LINC00161-202ENST00000455939 GRIN2BQ13224 1484 aa7.36□□□□□ -1.23
LINC00161-202ENST00000455939 FAM221BA6H8Z2 402 aa7.36□□□□□ -1.23
LINC00161-202ENST00000455939 MEFVO15553 781 aaPredicted RBP7.36□□□□□ -1.23
LINC00161-202ENST00000455939 PNLIPP16233 465 aa7.36□□□□□ -1.23
LINC00161-202ENST00000455939 GFRA1P56159 465 aa7.36□□□□□ -1.23
LINC00161-202ENST00000455939 BMS1Q14692 1282 aaKnown RBP7.36□□□□□ -1.23
LINC00161-202ENST00000455939 ZNF605Q86T29 641 aa7.36□□□□□ -1.23
LINC00161-202ENST00000455939 FRS2Q8WU20 508 aa7.36□□□□□ -1.23
LINC00161-202ENST00000455939 KCTD13Q8WZ19 329 aa7.36□□□□□ -1.23
LINC00161-202ENST00000455939 EPB41L4BQ9H329 900 aa7.36□□□□□ -1.23
LINC00161-202ENST00000455939 DCP1AQ9NPI6 582 aaPredicted RBP7.36□□□□□ -1.23
LINC00161-202ENST00000455939 NUP160Q12769 1436 aa7.35□□□□□ -1.23
LINC00161-202ENST00000455939 TRAV20A0A0B4J274 112 aa7.35□□□□□ -1.23
LINC00161-202ENST00000455939 OR14I1A6ND48 311 aa7.35□□□□□ -1.23
LINC00161-202ENST00000455939 PRODHO43272 600 aa7.35□□□□□ -1.23
LINC00161-202ENST00000455939 MSL3P1P0C860 447 aa7.35□□□□□ -1.23
LINC00161-202ENST00000455939 MVKQ03426 396 aa7.35□□□□□ -1.23
LINC00161-202ENST00000455939 PPIL6Q8IXY8 311 aa7.35□□□□□ -1.23
LINC00161-202ENST00000455939 TMEM145Q8NBT3 493 aa7.35□□□□□ -1.23
LINC00161-202ENST00000455939 SPATA9Q9BWV2 254 aa7.35□□□□□ -1.23
LINC00161-202ENST00000455939 ZSWIM4Q9H7M6 989 aa7.35□□□□□ -1.23
LINC00161-202ENST00000455939 ARHGEF4Q9NR80 690 aa7.35□□□□□ -1.23
LINC00161-202ENST00000455939 BTG4Q9NY30 223 aa7.35□□□□□ -1.23
LINC00161-202ENST00000455939 GULP1Q9UBP9 304 aa7.35□□□□□ -1.23
LINC00161-202ENST00000455939 ACSL6Q9UKU0 697 aa7.35□□□□□ -1.23
LINC00161-202ENST00000455939 RWDD3Q9Y3V2 267 aa7.35□□□□□ -1.23
LINC00161-202ENST00000455939 SRCAPQ6ZRS2 3230 aa7.35□□□□□ -1.23
LINC00161-202ENST00000455939 KDM2BQ8NHM5 1336 aa7.34□□□□□ -1.23
LINC00161-202ENST00000455939 NPHS1O60500 1241 aa7.34□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms