RNA–Protein interactions for RNA: ENST00000455359.5

HMGXB4-204, Transcript of HMG-box containing 4, humanhuman

TSL 1 (best)

Gene HMGXB4, Length 1,325 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-204ENST00000455359 BAATQ14032 418 aaPredicted RBP16.46■□□□□ 0.23
HMGXB4-204ENST00000455359 MCTP2Q6DN12 878 aa16.46■□□□□ 0.23
HMGXB4-204ENST00000455359 GALNT17Q6IS24 598 aa16.46■□□□□ 0.23
HMGXB4-204ENST00000455359 NSMFQ6X4W1 530 aa16.46■□□□□ 0.23
HMGXB4-204ENST00000455359 ZNF467Q7Z7K2 595 aaPredicted RBP16.46■□□□□ 0.23
HMGXB4-204ENST00000455359 FAM133AQ8N9E0 248 aa16.46■□□□□ 0.23
HMGXB4-204ENST00000455359 PXYLP1Q8TE99 480 aa16.46■□□□□ 0.23
HMGXB4-204ENST00000455359 INTS4Q96HW7 963 aaKnown RBP16.46■□□□□ 0.23
HMGXB4-204ENST00000455359 KIF3AQ9Y496 699 aa16.46■□□□□ 0.23
HMGXB4-204ENST00000455359 B4DLN1 442 aa16.45■□□□□ 0.22
HMGXB4-204ENST00000455359 OPLAHO14841 1288 aa16.45■□□□□ 0.22
HMGXB4-204ENST00000455359 RPS6P62753 249 aaKnown RBP16.45■□□□□ 0.22
HMGXB4-204ENST00000455359 CAP1Q01518 475 aa16.45■□□□□ 0.22
HMGXB4-204ENST00000455359 ZNF792Q3KQV3 632 aa16.45■□□□□ 0.22
HMGXB4-204ENST00000455359 RAET1EQ8TD07 263 aa16.45■□□□□ 0.22
HMGXB4-204ENST00000455359 BICD2Q8TD16 824 aa16.45■□□□□ 0.22
HMGXB4-204ENST00000455359 GPKOWQ92917 476 aaPredicted RBP eCLIP16.45■□□□□ 0.22
HMGXB4-204ENST00000455359 CUL5Q93034 780 aa16.45■□□□□ 0.22
HMGXB4-204ENST00000455359 ZMYND12Q9H0C1 365 aa16.45■□□□□ 0.22
HMGXB4-204ENST00000455359 C6orf50Q9HD87 102 aa16.45■□□□□ 0.22
HMGXB4-204ENST00000455359 RIC8AQ9NPQ8 531 aa16.45■□□□□ 0.22
HMGXB4-204ENST00000455359 ADD3Q9UEY8 706 aaKnown RBP16.45■□□□□ 0.22
HMGXB4-204ENST00000455359 PTPN22Q9Y2R2 807 aa16.45■□□□□ 0.22
HMGXB4-204ENST00000455359 JAK2O60674 1132 aa16.45■□□□□ 0.22
HMGXB4-204ENST00000455359 FDPSP14324 419 aaKnown RBP16.45■□□□□ 0.22
HMGXB4-204ENST00000455359 CALML3P27482 149 aa16.45■□□□□ 0.22
HMGXB4-204ENST00000455359 ADCY7P51828 1080 aa16.45■□□□□ 0.22
HMGXB4-204ENST00000455359 OLFML2BQ68BL8 750 aa16.45■□□□□ 0.22
HMGXB4-204ENST00000455359 DNERQ8NFT8 737 aa16.45■□□□□ 0.22
HMGXB4-204ENST00000455359 SYTL5Q8TDW5 730 aaPredicted RBP16.45■□□□□ 0.22
HMGXB4-204ENST00000455359 MPHOSPH6Q99547 160 aaKnown RBP16.45■□□□□ 0.22
HMGXB4-204ENST00000455359 SMCO2A6NFE2 343 aa16.44■□□□□ 0.22
HMGXB4-204ENST00000455359 COBLO75128 1261 aa16.44■□□□□ 0.22
HMGXB4-204ENST00000455359 CFBP00751 764 aa16.44■□□□□ 0.22
HMGXB4-204ENST00000455359 FOSP01100 380 aaPredicted RBP16.44■□□□□ 0.22
HMGXB4-204ENST00000455359 PGK2P07205 417 aa16.44■□□□□ 0.22
HMGXB4-204ENST00000455359 TAL1P17542 331 aaPredicted RBP16.44■□□□□ 0.22
HMGXB4-204ENST00000455359 CYP2B6P20813 491 aa16.44■□□□□ 0.22
HMGXB4-204ENST00000455359 TYW1BQ6NUM6 668 aa16.44■□□□□ 0.22
HMGXB4-204ENST00000455359 FBXO46Q6PJ61 603 aaPredicted RBP16.44■□□□□ 0.22
HMGXB4-204ENST00000455359 SLAIN1Q8ND83 568 aa16.44■□□□□ 0.22
HMGXB4-204ENST00000455359 ALG1Q9BT22 464 aa16.44■□□□□ 0.22
HMGXB4-204ENST00000455359 GABRQQ9UN88 632 aa16.44■□□□□ 0.22
HMGXB4-204ENST00000455359 ASB14A6NK59 587 aa16.43■□□□□ 0.22
HMGXB4-204ENST00000455359 MEIS2O14770 477 aa16.43■□□□□ 0.22
HMGXB4-204ENST00000455359 PPFIA3O75145 1194 aa16.43■□□□□ 0.22
HMGXB4-204ENST00000455359 BECN1Q14457 450 aa16.43■□□□□ 0.22
HMGXB4-204ENST00000455359 MAMDC4Q6UXC1 1216 aa16.43■□□□□ 0.22
HMGXB4-204ENST00000455359 SLC30A10Q6XR72 485 aa16.43■□□□□ 0.22
HMGXB4-204ENST00000455359 FAM184AQ8NB25 1140 aa16.43■□□□□ 0.22
HMGXB4-204ENST00000455359 NSUN6Q8TEA1 469 aaKnown RBP16.43■□□□□ 0.22
HMGXB4-204ENST00000455359 MAML3Q96JK9 1138 aa16.43■□□□□ 0.22
HMGXB4-204ENST00000455359 VPS54Q9P1Q0 977 aa16.43■□□□□ 0.22
HMGXB4-204ENST00000455359 NRBP1Q9UHY1 535 aa16.43■□□□□ 0.22
HMGXB4-204ENST00000455359 BAZ2BQ9UIF8 2168 aaKnown RBP16.42■□□□□ 0.22
HMGXB4-204ENST00000455359 ADCY3O60266 1144 aa16.42■□□□□ 0.22
HMGXB4-204ENST00000455359 ECM2O94769 699 aaPredicted RBP16.42■□□□□ 0.22
HMGXB4-204ENST00000455359 IGHA2P01877 340 aa16.42■□□□□ 0.22
HMGXB4-204ENST00000455359 NLRP5P59047 1200 aa16.42■□□□□ 0.22
HMGXB4-204ENST00000455359 AP3B2Q13367 1082 aa16.42■□□□□ 0.22
HMGXB4-204ENST00000455359 TRIM29Q14134 588 aa16.42■□□□□ 0.22
HMGXB4-204ENST00000455359 DAGLBQ8NCG7 672 aa16.42■□□□□ 0.22
HMGXB4-204ENST00000455359 TBC1D5Q92609 795 aa16.42■□□□□ 0.22
HMGXB4-204ENST00000455359 IWS1Q96ST2 819 aa16.42■□□□□ 0.22
HMGXB4-204ENST00000455359 SMC3Q9UQE7 1217 aa16.42■□□□□ 0.22
HMGXB4-204ENST00000455359 SYNGAP1Q96PV0 1343 aa16.41■□□□□ 0.22
HMGXB4-204ENST00000455359 HMGCRP04035 888 aa16.41■□□□□ 0.22
HMGXB4-204ENST00000455359 CNTN2Q02246 1040 aa16.41■□□□□ 0.22
HMGXB4-204ENST00000455359 MFSD14CQ5VZR4 134 aa16.41■□□□□ 0.22
HMGXB4-204ENST00000455359 XRRA1Q6P2D8 792 aa16.41■□□□□ 0.22
HMGXB4-204ENST00000455359 REXO1Q8N1G1 1221 aaKnown RBP16.41■□□□□ 0.22
HMGXB4-204ENST00000455359 NPLOC4Q8TAT6 608 aa16.41■□□□□ 0.22
HMGXB4-204ENST00000455359 MORC4Q8TE76 937 aa16.41■□□□□ 0.22
HMGXB4-204ENST00000455359 RMDN3Q96TC7 470 aa16.41■□□□□ 0.22
HMGXB4-204ENST00000455359 PHF20Q9BVI0 1012 aa16.41■□□□□ 0.22
HMGXB4-204ENST00000455359 EHMT1Q9H9B1 1298 aa16.41■□□□□ 0.22
HMGXB4-204ENST00000455359 PCDHA4Q9UN74 947 aa16.41■□□□□ 0.22
HMGXB4-204ENST00000455359 PTCH2Q9Y6C5 1203 aa16.41■□□□□ 0.22
HMGXB4-204ENST00000455359 ZNF236Q9UL36 1845 aa16.4■□□□□ 0.22
HMGXB4-204ENST00000455359 SOWAHBA6NEL2 793 aa16.4■□□□□ 0.22
HMGXB4-204ENST00000455359 SPDYE3A6NKU9 549 aa16.4■□□□□ 0.22
HMGXB4-204ENST00000455359 PDIA4P13667 645 aaKnown RBP16.4■□□□□ 0.22
HMGXB4-204ENST00000455359 PDCP20941 246 aa16.4■□□□□ 0.22
HMGXB4-204ENST00000455359 HOXA13P31271 388 aaPredicted RBP16.4■□□□□ 0.22
HMGXB4-204ENST00000455359 GRK4P32298 578 aa16.4■□□□□ 0.22
HMGXB4-204ENST00000455359 CLK2P49760 499 aaKnown RBP16.4■□□□□ 0.22
HMGXB4-204ENST00000455359 USP17L6PQ6QN14 398 aa16.4■□□□□ 0.22
HMGXB4-204ENST00000455359 C8orf76Q96K31 380 aa16.4■□□□□ 0.22
HMGXB4-204ENST00000455359 FGD4Q96M96 766 aa16.4■□□□□ 0.22
HMGXB4-204ENST00000455359 AIFM3Q96NN9 605 aa16.4■□□□□ 0.22
HMGXB4-204ENST00000455359 TINF2Q9BSI4 451 aa16.4■□□□□ 0.22
HMGXB4-204ENST00000455359 BRMS1Q9HCU9 246 aa16.4■□□□□ 0.22
HMGXB4-204ENST00000455359 FRMPD4Q14CM0 1322 aa16.39■□□□□ 0.21
HMGXB4-204ENST00000455359 EDNRBP24530 442 aa16.39■□□□□ 0.21
HMGXB4-204ENST00000455359 ALDH5A1P51649 535 aaPredicted RBP16.39■□□□□ 0.21
HMGXB4-204ENST00000455359 SAFBQ15424 915 aaKnown RBP eCLIP16.39■□□□□ 0.21
HMGXB4-204ENST00000455359 ARHGEF16Q5VV41 709 aa16.39■□□□□ 0.21
HMGXB4-204ENST00000455359 FCHSD1Q86WN1 690 aa16.39■□□□□ 0.21
HMGXB4-204ENST00000455359 FBXO18Q8NFZ0 1043 aa16.39■□□□□ 0.21
HMGXB4-204ENST00000455359 TRIB2Q92519 343 aa16.39■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms