RNA–Protein interactions for RNA: ENST00000454852.6

TRAF4-206, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 672 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-206ENST00000454852 PCDHA6Q9UN73 950 aa12.9□□□□□ -0.34
TRAF4-206ENST00000454852 PCDHA8Q9Y5H6 950 aa12.9□□□□□ -0.34
TRAF4-206ENST00000454852 PFASO15067 1338 aa12.89□□□□□ -0.35
TRAF4-206ENST00000454852 FRMPD4Q14CM0 1322 aa12.89□□□□□ -0.35
TRAF4-206ENST00000454852 KIF28PB7ZC32 967 aa12.89□□□□□ -0.35
TRAF4-206ENST00000454852 STRNO43815 780 aa12.89□□□□□ -0.35
TRAF4-206ENST00000454852 F13A1P00488 732 aa12.89□□□□□ -0.35
TRAF4-206ENST00000454852 TAL1P17542 331 aaPredicted RBP12.89□□□□□ -0.35
TRAF4-206ENST00000454852 MAPK4P31152 587 aa12.89□□□□□ -0.35
TRAF4-206ENST00000454852 GUCY1B3Q02153 619 aa12.89□□□□□ -0.35
TRAF4-206ENST00000454852 PLS1Q14651 629 aa12.89□□□□□ -0.35
TRAF4-206ENST00000454852 RNF207Q6ZRF8 634 aa12.89□□□□□ -0.35
TRAF4-206ENST00000454852 KRT25Q7Z3Z0 450 aa12.89□□□□□ -0.35
TRAF4-206ENST00000454852 NOSTRINQ8IVI9 506 aa12.89□□□□□ -0.35
TRAF4-206ENST00000454852 OXER1Q8TDS5 423 aa12.89□□□□□ -0.35
TRAF4-206ENST00000454852 CRYGNQ8WXF5 182 aa12.89□□□□□ -0.35
TRAF4-206ENST00000454852 PORCNQ9H237 461 aa12.89□□□□□ -0.35
TRAF4-206ENST00000454852 A1CFQ9NQ94 594 aaKnown RBP12.89□□□□□ -0.35
TRAF4-206ENST00000454852 CPA4Q9UI42 421 aa12.89□□□□□ -0.35
TRAF4-206ENST00000454852 RPTORQ8N122 1335 aa12.88□□□□□ -0.35
TRAF4-206ENST00000454852 DNAJC25-GNG10A0A024R161 153 aa12.88□□□□□ -0.35
TRAF4-206ENST00000454852 LOC102724159A0A0B4J2E5 919 aa12.88□□□□□ -0.35
TRAF4-206ENST00000454852 ADAMTS3O15072 1205 aa12.88□□□□□ -0.35
TRAF4-206ENST00000454852 PEX10O60683 326 aa12.88□□□□□ -0.35
TRAF4-206ENST00000454852 TRAPPC10P48553 1259 aa12.88□□□□□ -0.35
TRAF4-206ENST00000454852 RPS6P62753 249 aaKnown RBP12.88□□□□□ -0.35
TRAF4-206ENST00000454852 MAP2K1Q02750 393 aaPredicted RBP12.88□□□□□ -0.35
TRAF4-206ENST00000454852 NR5A1Q13285 461 aa12.88□□□□□ -0.35
TRAF4-206ENST00000454852 PWP2Q15269 919 aaKnown RBP12.88□□□□□ -0.35
TRAF4-206ENST00000454852 USP17L6PQ6QN14 398 aa12.88□□□□□ -0.35
TRAF4-206ENST00000454852 NCAPG2Q86XI2 1143 aa12.88□□□□□ -0.35
TRAF4-206ENST00000454852 SYTL5Q8TDW5 730 aaPredicted RBP12.88□□□□□ -0.35
TRAF4-206ENST00000454852 TBC1D5Q92609 795 aa12.88□□□□□ -0.35
TRAF4-206ENST00000454852 CYP39A1Q9NYL5 469 aa12.88□□□□□ -0.35
TRAF4-206ENST00000454852 CFBP00751 764 aa12.87□□□□□ -0.35
TRAF4-206ENST00000454852 FOSBP53539 338 aa12.87□□□□□ -0.35
TRAF4-206ENST00000454852 ATL3Q6DD88 541 aa12.87□□□□□ -0.35
TRAF4-206ENST00000454852 FAM133AQ8N9E0 248 aa12.87□□□□□ -0.35
TRAF4-206ENST00000454852 EFCC1Q9HA90 598 aa12.87□□□□□ -0.35
TRAF4-206ENST00000454852 HOMER2Q9NSB8 354 aa12.87□□□□□ -0.35
TRAF4-206ENST00000454852 COL20A1Q9P218 1284 aa12.87□□□□□ -0.35
TRAF4-206ENST00000454852 ATP6V1DQ9Y5K8 247 aa12.87□□□□□ -0.35
TRAF4-206ENST00000454852 LCTP09848 1927 aa12.87□□□□□ -0.35
TRAF4-206ENST00000454852 MYH15Q9Y2K3 1946 aa12.86□□□□□ -0.35
TRAF4-206ENST00000454852 PLXNB2O15031 1838 aa12.86□□□□□ -0.35
TRAF4-206ENST00000454852 CCDC194A0A1B0GVG4 234 aa12.86□□□□□ -0.35
TRAF4-206ENST00000454852 SLC15A5A6NIM6 579 aa12.86□□□□□ -0.35
TRAF4-206ENST00000454852 SPDYE3A6NKU9 549 aa12.86□□□□□ -0.35
TRAF4-206ENST00000454852 CYP3A4P08684 503 aa12.86□□□□□ -0.35
TRAF4-206ENST00000454852 FCER1AP12319 257 aa12.86□□□□□ -0.35
TRAF4-206ENST00000454852 PTPREP23469 700 aa12.86□□□□□ -0.35
TRAF4-206ENST00000454852 SREBF1P36956 1147 aa12.86□□□□□ -0.35
TRAF4-206ENST00000454852 ORC2Q13416 577 aaPredicted RBP12.86□□□□□ -0.35
TRAF4-206ENST00000454852 BAATQ14032 418 aaPredicted RBP12.86□□□□□ -0.35
TRAF4-206ENST00000454852 GRB14Q14449 540 aa12.86□□□□□ -0.35
TRAF4-206ENST00000454852 KCTD2Q14681 263 aa12.86□□□□□ -0.35
TRAF4-206ENST00000454852 NONOQ15233 471 aaKnown RBP eCLIP12.86□□□□□ -0.35
TRAF4-206ENST00000454852 UBE2SQ16763 222 aa12.86□□□□□ -0.35
TRAF4-206ENST00000454852 RILPL1Q5EBL4 403 aa12.86□□□□□ -0.35
TRAF4-206ENST00000454852 EARS2Q5JPH6 523 aaKnown RBP12.86□□□□□ -0.35
TRAF4-206ENST00000454852 MYSM1Q5VVJ2 828 aa12.86□□□□□ -0.35
TRAF4-206ENST00000454852 MOXD1Q6UVY6 613 aa12.86□□□□□ -0.35
TRAF4-206ENST00000454852 SLC30A10Q6XR72 485 aa12.86□□□□□ -0.35
TRAF4-206ENST00000454852 CLEC17AQ6ZS10 378 aa12.86□□□□□ -0.35
TRAF4-206ENST00000454852 GPR142Q7Z601 462 aa12.86□□□□□ -0.35
TRAF4-206ENST00000454852 PLEKHH3Q7Z736 793 aa12.86□□□□□ -0.35
TRAF4-206ENST00000454852 DNERQ8NFT8 737 aa12.86□□□□□ -0.35
TRAF4-206ENST00000454852 RASGRP4Q8TDF6 673 aa12.86□□□□□ -0.35
TRAF4-206ENST00000454852 ANO3Q9BYT9 981 aa12.86□□□□□ -0.35
TRAF4-206ENST00000454852 R3HDMLQ9H3Y0 253 aa12.86□□□□□ -0.35
TRAF4-206ENST00000454852 BIN2Q9UBW5 565 aaPredicted RBP12.86□□□□□ -0.35
TRAF4-206ENST00000454852 DIS3Q9Y2L1 958 aaKnown RBP12.86□□□□□ -0.35
TRAF4-206ENST00000454852 MORC2Q9Y6X9 1032 aaPredicted RBP12.86□□□□□ -0.35
TRAF4-206ENST00000454852 MGAMO43451 1857 aa12.85□□□□□ -0.35
TRAF4-206ENST00000454852 EDIL3O43854 480 aa12.85□□□□□ -0.35
TRAF4-206ENST00000454852 TRPA1O75762 1119 aa12.85□□□□□ -0.35
TRAF4-206ENST00000454852 HOXC6P09630 235 aa12.85□□□□□ -0.35
TRAF4-206ENST00000454852 HOXA13P31271 388 aaPredicted RBP12.85□□□□□ -0.35
TRAF4-206ENST00000454852 USP11P51784 963 aa12.85□□□□□ -0.35
TRAF4-206ENST00000454852 GNL2Q13823 731 aaKnown RBP12.85□□□□□ -0.35
TRAF4-206ENST00000454852 MORN1Q5T089 497 aa12.85□□□□□ -0.35
TRAF4-206ENST00000454852 JAKMIP3Q5VZ66 844 aa12.85□□□□□ -0.35
TRAF4-206ENST00000454852 MCTP1Q6DN14 999 aa12.85□□□□□ -0.35
TRAF4-206ENST00000454852 XRRA1Q6P2D8 792 aa12.85□□□□□ -0.35
TRAF4-206ENST00000454852 NSMFQ6X4W1 530 aa12.85□□□□□ -0.35
TRAF4-206ENST00000454852 PIK3AP1Q6ZUJ8 805 aa12.85□□□□□ -0.35
TRAF4-206ENST00000454852 ZNF467Q7Z7K2 595 aaPredicted RBP12.85□□□□□ -0.35
TRAF4-206ENST00000454852 FERMT3Q86UX7 667 aa12.85□□□□□ -0.35
TRAF4-206ENST00000454852 ANKRD35Q8N283 1001 aa12.85□□□□□ -0.35
TRAF4-206ENST00000454852 JMYQ8N9B5 988 aa12.85□□□□□ -0.35
TRAF4-206ENST00000454852 USP6NLQ92738 828 aa12.85□□□□□ -0.35
TRAF4-206ENST00000454852 MBOAT7Q96N66 472 aa12.85□□□□□ -0.35
TRAF4-206ENST00000454852 MMP19Q99542 508 aa12.85□□□□□ -0.35
TRAF4-206ENST00000454852 EHMT1Q9H9B1 1298 aa12.85□□□□□ -0.35
TRAF4-206ENST00000454852 TMEM260Q9NX78 707 aa12.85□□□□□ -0.35
TRAF4-206ENST00000454852 WBP1LQ9NX94 342 aa12.85□□□□□ -0.35
TRAF4-206ENST00000454852 CYP3A7-CYP3A51PA0A087WV96 503 aa12.84□□□□□ -0.35
TRAF4-206ENST00000454852 CYP3A7P24462 503 aa12.84□□□□□ -0.35
TRAF4-206ENST00000454852 EDNRBP24530 442 aa12.84□□□□□ -0.35
TRAF4-206ENST00000454852 CIITAP33076 1130 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms