RNA–Protein interactions for RNA: ENST00000454849.5

MSH2-203, Transcript of mutS homolog 2, humanhuman

TSL 4

Gene MSH2, Length 560 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH2-203ENST00000454849 PCDHA1Q9Y5I3 950 aa28.89■■■□□ 2.22
MSH2-203ENST00000454849 SYNRGQ9UMZ2 1314 aa28.89■■■□□ 2.21
MSH2-203ENST00000454849 DDAH1O94760 285 aa28.88■■■□□ 2.21
MSH2-203ENST00000454849 PLEKHA8P1O95397 391 aa28.88■■■□□ 2.21
MSH2-203ENST00000454849 EXOSC10Q01780 885 aaKnown RBP28.88■■■□□ 2.21
MSH2-203ENST00000454849 TSGA10IPQ3SY00 556 aa28.88■■■□□ 2.21
MSH2-203ENST00000454849 TMTC2Q8N394 836 aa28.88■■■□□ 2.21
MSH2-203ENST00000454849 TAAR1Q96RJ0 339 aa28.88■■■□□ 2.21
MSH2-203ENST00000454849 MTA3Q9BTC8 594 aa28.88■■■□□ 2.21
MSH2-203ENST00000454849 COL20A1Q9P218 1284 aa28.88■■■□□ 2.21
MSH2-203ENST00000454849 SLC12A7Q9Y666 1083 aa28.88■■■□□ 2.21
MSH2-203ENST00000454849 ADAMTS4O75173 837 aa28.87■■■□□ 2.21
MSH2-203ENST00000454849 CFBP00751 764 aa28.87■■■□□ 2.21
MSH2-203ENST00000454849 LIFRP42702 1097 aa28.87■■■□□ 2.21
MSH2-203ENST00000454849 TNFAIP2Q03169 654 aa28.87■■■□□ 2.21
MSH2-203ENST00000454849 TAPT1Q6NXT6 567 aa28.87■■■□□ 2.21
MSH2-203ENST00000454849 DHX32Q7L7V1 743 aaKnown RBP28.87■■■□□ 2.21
MSH2-203ENST00000454849 RNF180Q86T96 592 aa28.87■■■□□ 2.21
MSH2-203ENST00000454849 SYTL5Q8TDW5 730 aaPredicted RBP28.87■■■□□ 2.21
MSH2-203ENST00000454849 SNX14Q9Y5W7 946 aa28.87■■■□□ 2.21
MSH2-203ENST00000454849 OPLAHO14841 1288 aa28.86■■■□□ 2.21
MSH2-203ENST00000454849 DUSP11O75319 330 aaKnown RBP28.86■■■□□ 2.21
MSH2-203ENST00000454849 REC8O95072 547 aa28.86■■■□□ 2.21
MSH2-203ENST00000454849 C6orf222P0C671 652 aaPredicted RBP28.86■■■□□ 2.21
MSH2-203ENST00000454849 HSPA4P34932 840 aa28.86■■■□□ 2.21
MSH2-203ENST00000454849 CCDC82Q8N4S0 544 aa28.86■■■□□ 2.21
MSH2-203ENST00000454849 RGS22Q8NE09 1264 aa28.86■■■□□ 2.21
MSH2-203ENST00000454849 JAKMIP1Q96N16 626 aaKnown RBP28.86■■■□□ 2.21
MSH2-203ENST00000454849 MYH6P13533 1939 aa28.86■■■□□ 2.21
MSH2-203ENST00000454849 SMPD1P17405 629 aa28.85■■■□□ 2.21
MSH2-203ENST00000454849 KIF5BP33176 963 aa28.85■■■□□ 2.21
MSH2-203ENST00000454849 PDE4DQ08499 809 aa28.85■■■□□ 2.21
MSH2-203ENST00000454849 KRT32Q14532 448 aa28.85■■■□□ 2.21
MSH2-203ENST00000454849 KCNA10Q16322 511 aa28.85■■■□□ 2.21
MSH2-203ENST00000454849 MICU3Q86XE3 530 aa28.85■■■□□ 2.21
MSH2-203ENST00000454849 SRBD1Q8N5C6 995 aaKnown RBP28.85■■■□□ 2.21
MSH2-203ENST00000454849 MORC4Q8TE76 937 aa28.85■■■□□ 2.21
MSH2-203ENST00000454849 BRPF3Q9ULD4 1205 aa28.85■■■□□ 2.21
MSH2-203ENST00000454849 COLQQ9Y215 455 aaPredicted RBP28.85■■■□□ 2.21
MSH2-203ENST00000454849 PNMA6FA0A0J9YX94 578 aa28.84■■■□□ 2.21
MSH2-203ENST00000454849 hCG_1642624A0A1W2PR95 340 aa28.84■■■□□ 2.21
MSH2-203ENST00000454849 HOXA13P31271 388 aaPredicted RBP28.84■■■□□ 2.21
MSH2-203ENST00000454849 BEX3Q00994 111 aa28.84■■■□□ 2.21
MSH2-203ENST00000454849 CHRDL2Q6WN34 429 aa28.84■■■□□ 2.21
MSH2-203ENST00000454849 SLC39A5Q6ZMH5 540 aa28.84■■■□□ 2.21
MSH2-203ENST00000454849 MCF2L2Q86YR7 1114 aa28.84■■■□□ 2.21
MSH2-203ENST00000454849 KCNB2Q92953 911 aa28.84■■■□□ 2.21
MSH2-203ENST00000454849 ATP11BQ9Y2G3 1177 aa28.84■■■□□ 2.21
MSH2-203ENST00000454849 RTP1P59025 263 aa28.83■■■□□ 2.21
MSH2-203ENST00000454849 KLHDC9Q8NEP7 349 aa28.83■■■□□ 2.21
MSH2-203ENST00000454849 MAP3K14Q99558 947 aa28.83■■■□□ 2.21
MSH2-203ENST00000454849 VTA1Q9NP79 307 aa28.83■■■□□ 2.21
MSH2-203ENST00000454849 NAP1L2Q9ULW6 460 aaPredicted RBP28.83■■■□□ 2.21
MSH2-203ENST00000454849 PHF24Q9UPV7 400 aa28.83■■■□□ 2.21
MSH2-203ENST00000454849 DNAH12Q6ZR08 3092 aa28.83■■■□□ 2.21
MSH2-203ENST00000454849 DYNC1LI2O43237 492 aaPredicted RBP28.82■■■□□ 2.2
MSH2-203ENST00000454849 GNASQ5JWF2 1037 aa28.82■■■□□ 2.2
MSH2-203ENST00000454849 FANCBQ8NB91 859 aa28.82■■■□□ 2.2
MSH2-203ENST00000454849 A0A1W2PQ45 241 aaPredicted RBP28.81■■■□□ 2.2
MSH2-203ENST00000454849 A0A1W2PQY0 241 aa28.81■■■□□ 2.2
MSH2-203ENST00000454849 EIF2AK2P19525 551 aaKnown RBP28.81■■■□□ 2.2
MSH2-203ENST00000454849 ACLYP53396 1101 aa28.81■■■□□ 2.2
MSH2-203ENST00000454849 FGD1P98174 961 aa28.81■■■□□ 2.2
MSH2-203ENST00000454849 IQSEC1Q6DN90 963 aa28.81■■■□□ 2.2
MSH2-203ENST00000454849 SYNE3Q6ZMZ3 975 aa28.81■■■□□ 2.2
MSH2-203ENST00000454849 SGMS1Q86VZ5 419 aa28.81■■■□□ 2.2
MSH2-203ENST00000454849 DNERQ8NFT8 737 aa28.81■■■□□ 2.2
MSH2-203ENST00000454849 RRP36Q96EU6 259 aaKnown RBP28.81■■■□□ 2.2
MSH2-203ENST00000454849 RMDN3Q96TC7 470 aa28.81■■■□□ 2.2
MSH2-203ENST00000454849 GNEQ9Y223 722 aaKnown RBP28.81■■■□□ 2.2
MSH2-203ENST00000454849 CTAGE5O15320 804 aa28.8■■■□□ 2.2
MSH2-203ENST00000454849 CALM1P0DP23 149 aa28.8■■■□□ 2.2
MSH2-203ENST00000454849 CALM2P0DP24 149 aa28.8■■■□□ 2.2
MSH2-203ENST00000454849 CALM3P0DP25 149 aa28.8■■■□□ 2.2
MSH2-203ENST00000454849 GJA9P57773 515 aa28.8■■■□□ 2.2
MSH2-203ENST00000454849 TRIM60Q495X7 471 aa28.8■■■□□ 2.2
MSH2-203ENST00000454849 CCSAPQ6IQ19 270 aaPredicted RBP28.8■■■□□ 2.2
MSH2-203ENST00000454849 APOA5Q6Q788 366 aa28.8■■■□□ 2.2
MSH2-203ENST00000454849 TLK2Q86UE8 772 aa28.8■■■□□ 2.2
MSH2-203ENST00000454849 SPZ1Q9BXG8 430 aa28.8■■■□□ 2.2
MSH2-203ENST00000454849 WDR11Q9BZH6 1224 aa28.8■■■□□ 2.2
MSH2-203ENST00000454849 UPF3AQ9H1J1 476 aaKnown RBP28.8■■■□□ 2.2
MSH2-203ENST00000454849 SPC25Q9HBM1 224 aa28.8■■■□□ 2.2
MSH2-203ENST00000454849 KLF18A0A0U1RQI7 1052 aa28.79■■■□□ 2.2
MSH2-203ENST00000454849 EDNRBP24530 442 aa28.79■■■□□ 2.2
MSH2-203ENST00000454849 GNAQP50148 359 aa28.79■■■□□ 2.2
MSH2-203ENST00000454849 ARHGEF16Q5VV41 709 aa28.79■■■□□ 2.2
MSH2-203ENST00000454849 BLOC1S2Q6QNY1 142 aa28.79■■■□□ 2.2
MSH2-203ENST00000454849 Q6ZUG5 572 aa28.79■■■□□ 2.2
MSH2-203ENST00000454849 FCHSD1Q86WN1 690 aa28.79■■■□□ 2.2
MSH2-203ENST00000454849 NSUN6Q8TEA1 469 aaKnown RBP28.79■■■□□ 2.2
MSH2-203ENST00000454849 LZTS2Q9BRK4 669 aa28.79■■■□□ 2.2
MSH2-203ENST00000454849 USP26Q9BXU7 913 aa28.79■■■□□ 2.2
MSH2-203ENST00000454849 AP5M1Q9H0R1 490 aa28.79■■■□□ 2.2
MSH2-203ENST00000454849 LRRC37A2A6NM11 1700 aa28.78■■■□□ 2.2
MSH2-203ENST00000454849 HSD17B4P51659 736 aa28.78■■■□□ 2.2
MSH2-203ENST00000454849 APOBRQ0VD83 1088 aa28.78■■■□□ 2.2
MSH2-203ENST00000454849 TMTC3Q6ZXV5 915 aa28.78■■■□□ 2.2
MSH2-203ENST00000454849 VTI1AQ96AJ9 217 aa28.78■■■□□ 2.2
MSH2-203ENST00000454849 ZFP91Q96JP5 570 aaPredicted RBP28.78■■■□□ 2.2
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms