RNA–Protein interactions for RNA: ENST00000454608.3

USP41-202, Transcript of ubiquitin specific peptidase 41, humanhuman

APPRIS P5 TSL 5 BASIC

Gene USP41, Length 1,077 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP41-202ENST00000454608 GPHNQ9NQX3 736 aaPredicted RBP12.43□□□□□ -0.42
USP41-202ENST00000454608 PDGFCQ9NRA1 345 aa12.43□□□□□ -0.42
USP41-202ENST00000454608 ZNF536O15090 1300 aa12.42□□□□□ -0.42
USP41-202ENST00000454608 LOC102724159A0A0B4J2E5 919 aa12.42□□□□□ -0.42
USP41-202ENST00000454608 KPNA6O60684 536 aa12.42□□□□□ -0.42
USP41-202ENST00000454608 TTLL1O95922 423 aa12.42□□□□□ -0.42
USP41-202ENST00000454608 NHLH1Q02575 133 aa12.42□□□□□ -0.42
USP41-202ENST00000454608 PWP2Q15269 919 aaKnown RBP12.42□□□□□ -0.42
USP41-202ENST00000454608 SLFNL1Q499Z3 407 aa12.42□□□□□ -0.42
USP41-202ENST00000454608 NFRKBQ6P4R8 1299 aa12.42□□□□□ -0.42
USP41-202ENST00000454608 FBXO16Q8IX29 292 aaPredicted RBP12.42□□□□□ -0.42
USP41-202ENST00000454608 ZNF444Q8N0Y2 327 aaPredicted RBP12.42□□□□□ -0.42
USP41-202ENST00000454608 MTMR4Q9NYA4 1195 aa12.42□□□□□ -0.42
USP41-202ENST00000454608 RAD50Q92878 1312 aa12.41□□□□□ -0.42
USP41-202ENST00000454608 TMEM232C9JQI7 657 aa12.41□□□□□ -0.42
USP41-202ENST00000454608 PLA2G6O60733 806 aa12.41□□□□□ -0.42
USP41-202ENST00000454608 PARNO95453 639 aaKnown RBP12.41□□□□□ -0.42
USP41-202ENST00000454608 ATP5JP18859 108 aa12.41□□□□□ -0.42
USP41-202ENST00000454608 SSTR3P32745 418 aaPredicted RBP12.41□□□□□ -0.42
USP41-202ENST00000454608 FAM47CQ5HY64 1035 aa12.41□□□□□ -0.42
USP41-202ENST00000454608 SLFN13Q68D06 897 aa12.41□□□□□ -0.42
USP41-202ENST00000454608 EEPD1Q7L9B9 569 aa12.41□□□□□ -0.42
USP41-202ENST00000454608 CCDC155Q8N6L0 562 aa12.41□□□□□ -0.42
USP41-202ENST00000454608 CEP95Q96GE4 821 aa12.41□□□□□ -0.42
USP41-202ENST00000454608 UIMC1Q96RL1 719 aa12.41□□□□□ -0.42
USP41-202ENST00000454608 HAUS7Q99871 368 aa12.41□□□□□ -0.42
USP41-202ENST00000454608 ZBED2Q9BTP6 218 aa12.41□□□□□ -0.42
USP41-202ENST00000454608 BOLA2Q9H3K6 86 aa12.41□□□□□ -0.42
USP41-202ENST00000454608 CYP39A1Q9NYL5 469 aa12.41□□□□□ -0.42
USP41-202ENST00000454608 ADD3Q9UEY8 706 aaKnown RBP12.41□□□□□ -0.42
USP41-202ENST00000454608 MINDY4BA8MYZ0 360 aa12.4□□□□□ -0.42
USP41-202ENST00000454608 NKRFO15226 690 aaKnown RBP eCLIP12.4□□□□□ -0.42
USP41-202ENST00000454608 MYL3P08590 195 aa12.4□□□□□ -0.42
USP41-202ENST00000454608 ALAS1P13196 640 aa12.4□□□□□ -0.42
USP41-202ENST00000454608 PTGS1P23219 599 aa12.4□□□□□ -0.42
USP41-202ENST00000454608 ERVK-21P61565 698 aa12.4□□□□□ -0.42
USP41-202ENST00000454608 NBPF20Q3BBV1 942 aa12.4□□□□□ -0.42
USP41-202ENST00000454608 LRRC47Q8N1G4 583 aaKnown RBP12.4□□□□□ -0.42
USP41-202ENST00000454608 GADD45GIP1Q8TAE8 222 aaPredicted RBP12.4□□□□□ -0.42
USP41-202ENST00000454608 CAGE1Q8TC20 777 aa12.4□□□□□ -0.42
USP41-202ENST00000454608 AFAP1L1Q8TED9 768 aa12.4□□□□□ -0.42
USP41-202ENST00000454608 GDPD5Q8WTR4 605 aa12.4□□□□□ -0.42
USP41-202ENST00000454608 STAG1Q8WVM7 1258 aa12.4□□□□□ -0.42
USP41-202ENST00000454608 GMCL1Q96IK5 515 aa12.4□□□□□ -0.42
USP41-202ENST00000454608 TGS1Q96RS0 853 aaKnown RBP12.4□□□□□ -0.42
USP41-202ENST00000454608 WDR11Q9BZH6 1224 aa12.4□□□□□ -0.42
USP41-202ENST00000454608 PUS7LQ9H0K6 701 aaKnown RBP12.4□□□□□ -0.42
USP41-202ENST00000454608 SUGCTQ9HAC7 445 aa12.4□□□□□ -0.42
USP41-202ENST00000454608 NOD1Q9Y239 953 aa12.4□□□□□ -0.42
USP41-202ENST00000454608 RBM47A0AV96 593 aaKnown RBP12.39□□□□□ -0.43
USP41-202ENST00000454608 DCXO43602 365 aa12.39□□□□□ -0.43
USP41-202ENST00000454608 KCNA5P22460 613 aa12.39□□□□□ -0.43
USP41-202ENST00000454608 WDR5P61964 334 aaKnown RBP12.39□□□□□ -0.43
USP41-202ENST00000454608 IKQ13123 557 aaPredicted RBP12.39□□□□□ -0.43
USP41-202ENST00000454608 PPP4R3BQ5MIZ7 849 aa12.39□□□□□ -0.43
USP41-202ENST00000454608 TMEM63BQ5T3F8 832 aa12.39□□□□□ -0.43
USP41-202ENST00000454608 PTCRAQ6ISU1 281 aaPredicted RBP12.39□□□□□ -0.43
USP41-202ENST00000454608 OR6J1Q8NGC5 347 aa12.39□□□□□ -0.43
USP41-202ENST00000454608 FBXL18Q96ME1 805 aa12.39□□□□□ -0.43
USP41-202ENST00000454608 STRBPQ96SI9 672 aaKnown RBP12.39□□□□□ -0.43
USP41-202ENST00000454608 RAD9AQ99638 391 aa12.39□□□□□ -0.43
USP41-202ENST00000454608 ISY1Q9ULR0 285 aaKnown RBP12.39□□□□□ -0.43
USP41-202ENST00000454608 FAM50BQ9Y247 325 aa12.39□□□□□ -0.43
USP41-202ENST00000454608 PLIN4Q96Q06 1357 aa12.39□□□□□ -0.43
USP41-202ENST00000454608 ZNF318Q5VUA4 2279 aa12.39□□□□□ -0.43
USP41-202ENST00000454608 POTEB3A0JP26 581 aa12.38□□□□□ -0.43
USP41-202ENST00000454608 LCHNA4D1U4 455 aa12.38□□□□□ -0.43
USP41-202ENST00000454608 GRXCR2A6NFK2 248 aa12.38□□□□□ -0.43
USP41-202ENST00000454608 GSG1L2A8MUP6 293 aa12.38□□□□□ -0.43
USP41-202ENST00000454608 EFCAB14O75071 495 aa12.38□□□□□ -0.43
USP41-202ENST00000454608 RAB11FIP3O75154 756 aa12.38□□□□□ -0.43
USP41-202ENST00000454608 GJB5O95377 273 aa12.38□□□□□ -0.43
USP41-202ENST00000454608 IL9P15248 144 aa12.38□□□□□ -0.43
USP41-202ENST00000454608 SLC1A4P43007 532 aa12.38□□□□□ -0.43
USP41-202ENST00000454608 CNKSR3Q6P9H4 555 aa12.38□□□□□ -0.43
USP41-202ENST00000454608 POTEBQ6S5H4 581 aa12.38□□□□□ -0.43
USP41-202ENST00000454608 SPRED2Q7Z698 418 aa12.38□□□□□ -0.43
USP41-202ENST00000454608 STK11IPQ8N1F8 1099 aa12.38□□□□□ -0.43
USP41-202ENST00000454608 NEDD1Q8NHV4 660 aa12.38□□□□□ -0.43
USP41-202ENST00000454608 MPHOSPH6Q99547 160 aaKnown RBP12.38□□□□□ -0.43
USP41-202ENST00000454608 PRKAG3Q9UGI9 489 aa12.38□□□□□ -0.43
USP41-202ENST00000454608 CTNNA3Q9UI47 895 aa12.38□□□□□ -0.43
USP41-202ENST00000454608 ABHD14A-ACY1A0A1B0GW23 586 aa12.37□□□□□ -0.43
USP41-202ENST00000454608 A6NJR5 290 aa12.37□□□□□ -0.43
USP41-202ENST00000454608 HMMRO75330 724 aa12.37□□□□□ -0.43
USP41-202ENST00000454608 CHGBP05060 677 aa12.37□□□□□ -0.43
USP41-202ENST00000454608 CENPBP07199 599 aaPredicted RBP12.37□□□□□ -0.43
USP41-202ENST00000454608 TSPY3P0CV98 308 aa12.37□□□□□ -0.43
USP41-202ENST00000454608 TSPY8P0CW00 308 aa12.37□□□□□ -0.43
USP41-202ENST00000454608 ALDH5A1P51649 535 aaPredicted RBP12.37□□□□□ -0.43
USP41-202ENST00000454608 MUM1L1Q5H9M0 696 aa12.37□□□□□ -0.43
USP41-202ENST00000454608 NSMFQ6X4W1 530 aa12.37□□□□□ -0.43
USP41-202ENST00000454608 NEK9Q8TD19 979 aa12.37□□□□□ -0.43
USP41-202ENST00000454608 CCPG1Q9ULG6 757 aa12.37□□□□□ -0.43
USP41-202ENST00000454608 DDX49Q9Y6V7 483 aaKnown RBP12.37□□□□□ -0.43
USP41-202ENST00000454608 LINC01553A4QN01 128 aa12.36□□□□□ -0.43
USP41-202ENST00000454608 CXCL10P02778 98 aa12.36□□□□□ -0.43
USP41-202ENST00000454608 RLBP1P12271 317 aa12.36□□□□□ -0.43
USP41-202ENST00000454608 SELPP16109 830 aa12.36□□□□□ -0.43
USP41-202ENST00000454608 GNAT2P19087 354 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms