RNA–Protein interactions for RNA: ENST00000454181.6

LYSMD2-202, Transcript of LysM domain containing 2, humanhuman

TSL 1 (best) BASIC

Gene LYSMD2, Length 1,228 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD2-202ENST00000454181 TMEM47Q9BQJ4 181 aa27.96■■■□□ 2.07
LYSMD2-202ENST00000454181 CXXC1Q9P0U4 656 aaPredicted RBP27.96■■■□□ 2.07
LYSMD2-202ENST00000454181 UMODL1Q5DID0 1318 aa27.95■■■□□ 2.07
LYSMD2-202ENST00000454181 FGAP02671 866 aa27.95■■■□□ 2.06
LYSMD2-202ENST00000454181 FGRP09769 529 aa27.95■■■□□ 2.06
LYSMD2-202ENST00000454181 SUPT20HL2P0C7V6 817 aa27.95■■■□□ 2.06
LYSMD2-202ENST00000454181 CPT1AP50416 773 aa27.95■■■□□ 2.06
LYSMD2-202ENST00000454181 ALDH5A1P51649 535 aaPredicted RBP27.95■■■□□ 2.06
LYSMD2-202ENST00000454181 MCMDC2Q4G0Z9 681 aa27.95■■■□□ 2.06
LYSMD2-202ENST00000454181 TMEM63BQ5T3F8 832 aa27.95■■■□□ 2.06
LYSMD2-202ENST00000454181 NFIBO00712 420 aa27.94■■■□□ 2.06
LYSMD2-202ENST00000454181 IGFBP4P22692 258 aa27.94■■■□□ 2.06
LYSMD2-202ENST00000454181 CALML3P27482 149 aa27.94■■■□□ 2.06
LYSMD2-202ENST00000454181 AKNAD1Q5T1N1 836 aa27.94■■■□□ 2.06
LYSMD2-202ENST00000454181 ALDH8A1Q9H2A2 487 aaPredicted RBP27.94■■■□□ 2.06
LYSMD2-202ENST00000454181 NKX2-4Q9H2Z4 354 aa27.94■■■□□ 2.06
LYSMD2-202ENST00000454181 TCP11L1Q9NUJ3 509 aa27.94■■■□□ 2.06
LYSMD2-202ENST00000454181 SLC4A7Q9Y6M7 1214 aa27.94■■■□□ 2.06
LYSMD2-202ENST00000454181 SALL3Q9BXA9 1300 aa27.93■■■□□ 2.06
LYSMD2-202ENST00000454181 MYL3P08590 195 aa27.93■■■□□ 2.06
LYSMD2-202ENST00000454181 PDE1AP54750 535 aa27.93■■■□□ 2.06
LYSMD2-202ENST00000454181 RNF207Q6ZRF8 634 aa27.93■■■□□ 2.06
LYSMD2-202ENST00000454181 PRUNE2Q8WUY3 3088 aa27.93■■■□□ 2.06
LYSMD2-202ENST00000454181 VCANP13611 3396 aa27.92■■■□□ 2.06
LYSMD2-202ENST00000454181 ZBBXA8MT70 800 aa27.92■■■□□ 2.06
LYSMD2-202ENST00000454181 PDE4DQ08499 809 aa27.92■■■□□ 2.06
LYSMD2-202ENST00000454181 OR6J1Q8NGC5 347 aa27.92■■■□□ 2.06
LYSMD2-202ENST00000454181 FAM227BQ96M60 508 aa27.92■■■□□ 2.06
LYSMD2-202ENST00000454181 WNT8AQ9H1J5 351 aa27.92■■■□□ 2.06
LYSMD2-202ENST00000454181 PRDM6Q9NQX0 595 aa27.92■■■□□ 2.06
LYSMD2-202ENST00000454181 RAD50Q92878 1312 aa27.92■■■□□ 2.06
LYSMD2-202ENST00000454181 B4DLN1 442 aa27.91■■■□□ 2.06
LYSMD2-202ENST00000454181 MRPL12P52815 198 aaKnown RBP27.91■■■□□ 2.06
LYSMD2-202ENST00000454181 MFSD6Q6ZSS7 791 aa27.91■■■□□ 2.06
LYSMD2-202ENST00000454181 TICAM2Q86XR7 235 aa27.91■■■□□ 2.06
LYSMD2-202ENST00000454181 TTC14Q96N46 770 aa27.91■■■□□ 2.06
LYSMD2-202ENST00000454181 MTG1Q9BT17 334 aaPredicted RBP27.91■■■□□ 2.06
LYSMD2-202ENST00000454181 TTC28Q96AY4 2481 aa27.9■■■□□ 2.06
LYSMD2-202ENST00000454181 HSPD1P10809 573 aaKnown RBP27.9■■■□□ 2.06
LYSMD2-202ENST00000454181 PDHBP11177 359 aa27.9■■■□□ 2.06
LYSMD2-202ENST00000454181 HAND2P61296 217 aa27.9■■■□□ 2.06
LYSMD2-202ENST00000454181 FAM47CQ5HY64 1035 aa27.9■■■□□ 2.06
LYSMD2-202ENST00000454181 ATXN2LQ8WWM7 1075 aaKnown RBP27.9■■■□□ 2.06
LYSMD2-202ENST00000454181 SCLYQ96I15 445 aa27.9■■■□□ 2.06
LYSMD2-202ENST00000454181 TNKSO95271 1327 aa27.9■■■□□ 2.06
LYSMD2-202ENST00000454181 A0A0D9SFI3 127 aa27.89■■■□□ 2.06
LYSMD2-202ENST00000454181 RBM47A0AV96 593 aaKnown RBP27.89■■■□□ 2.06
LYSMD2-202ENST00000454181 TRIM6-TRIM34B2RNG4 842 aa27.89■■■□□ 2.06
LYSMD2-202ENST00000454181 PFKMP08237 780 aa27.89■■■□□ 2.06
LYSMD2-202ENST00000454181 PCP11498 1178 aaKnown RBP27.89■■■□□ 2.06
LYSMD2-202ENST00000454181 PURAQ00577 322 aaKnown RBP27.89■■■□□ 2.06
LYSMD2-202ENST00000454181 PPP2R5BQ15173 497 aa27.89■■■□□ 2.06
LYSMD2-202ENST00000454181 CCDC85BQ15834 202 aaPredicted RBP27.89■■■□□ 2.06
LYSMD2-202ENST00000454181 SLC30A10Q6XR72 485 aa27.89■■■□□ 2.06
LYSMD2-202ENST00000454181 TRMT13Q9NUP7 481 aaKnown RBP27.89■■■□□ 2.06
LYSMD2-202ENST00000454181 THEGQ9P2T0 379 aa27.89■■■□□ 2.06
LYSMD2-202ENST00000454181 LRRC37A2A6NM11 1700 aa27.88■■■□□ 2.05
LYSMD2-202ENST00000454181 NKRFO15226 690 aaKnown RBP eCLIP27.88■■■□□ 2.05
LYSMD2-202ENST00000454181 KPNA6O60684 536 aa27.88■■■□□ 2.05
LYSMD2-202ENST00000454181 CYP2C9P11712 490 aa27.88■■■□□ 2.05
LYSMD2-202ENST00000454181 RRP1P56182 461 aaKnown RBP27.88■■■□□ 2.05
LYSMD2-202ENST00000454181 RPS6P62753 249 aaKnown RBP27.88■■■□□ 2.05
LYSMD2-202ENST00000454181 ZNF543Q08ER8 600 aa27.88■■■□□ 2.05
LYSMD2-202ENST00000454181 SCFD2Q8WU76 684 aa27.88■■■□□ 2.05
LYSMD2-202ENST00000454181 CLEC4DQ8WXI8 215 aa27.88■■■□□ 2.05
LYSMD2-202ENST00000454181 RNF41Q9H4P4 317 aaPredicted RBP27.88■■■□□ 2.05
LYSMD2-202ENST00000454181 YBX2Q9Y2T7 364 aaKnown RBP27.88■■■□□ 2.05
LYSMD2-202ENST00000454181 MYO9BQ13459 2157 aa27.87■■■□□ 2.05
LYSMD2-202ENST00000454181 RABGGTBP53611 331 aa27.87■■■□□ 2.05
LYSMD2-202ENST00000454181 MFAP1P55081 439 aaKnown RBP27.87■■■□□ 2.05
LYSMD2-202ENST00000454181 NMIQ13287 307 aaPredicted RBP27.87■■■□□ 2.05
LYSMD2-202ENST00000454181 PPP2R2DQ66LE6 453 aa27.87■■■□□ 2.05
LYSMD2-202ENST00000454181 IL27Q8NEV9 243 aa27.87■■■□□ 2.05
LYSMD2-202ENST00000454181 DNERQ8NFT8 737 aa27.87■■■□□ 2.05
LYSMD2-202ENST00000454181 TSPYL2Q9H2G4 693 aaPredicted RBP27.87■■■□□ 2.05
LYSMD2-202ENST00000454181 ZMYM6O95789 1325 aa27.87■■■□□ 2.05
LYSMD2-202ENST00000454181 TNFRSF10AO00220 468 aa27.86■■■□□ 2.05
LYSMD2-202ENST00000454181 ACTN1P12814 892 aa27.86■■■□□ 2.05
LYSMD2-202ENST00000454181 ATP2A2P16615 1042 aaKnown RBP27.86■■■□□ 2.05
LYSMD2-202ENST00000454181 ADGRE1Q14246 886 aa27.86■■■□□ 2.05
LYSMD2-202ENST00000454181 DEFB128Q7Z7B8 93 aa27.86■■■□□ 2.05
LYSMD2-202ENST00000454181 RETREG2Q8NC44 543 aa27.86■■■□□ 2.05
LYSMD2-202ENST00000454181 ESR2Q92731 530 aa27.86■■■□□ 2.05
LYSMD2-202ENST00000454181 RILPL2Q969X0 211 aa27.86■■■□□ 2.05
LYSMD2-202ENST00000454181 CRBNQ96SW2 442 aa27.86■■■□□ 2.05
LYSMD2-202ENST00000454181 PCDHA11Q9Y5I1 949 aa27.86■■■□□ 2.05
LYSMD2-202ENST00000454181 CCDC171Q6TFL3 1326 aa27.86■■■□□ 2.05
LYSMD2-202ENST00000454181 WDR19Q8NEZ3 1342 aa27.86■■■□□ 2.05
LYSMD2-202ENST00000454181 NBPF20Q3BBV1 942 aa27.85■■■□□ 2.05
LYSMD2-202ENST00000454181 GPATCH4Q5T3I0 446 aaKnown RBP27.85■■■□□ 2.05
LYSMD2-202ENST00000454181 NOD1Q9Y239 953 aa27.85■■■□□ 2.05
LYSMD2-202ENST00000454181 TXNP10599 105 aaKnown RBP27.84■■■□□ 2.05
LYSMD2-202ENST00000454181 MRPS5P82675 430 aaKnown RBP27.84■■■□□ 2.05
LYSMD2-202ENST00000454181 HDAC1Q13547 482 aaPredicted RBP27.84■■■□□ 2.05
LYSMD2-202ENST00000454181 ZNF589Q86UQ0 364 aaPredicted RBP27.84■■■□□ 2.05
LYSMD2-202ENST00000454181 ASB2Q96Q27 587 aa27.84■■■□□ 2.05
LYSMD2-202ENST00000454181 CHMP4BP1P59074 171 aa27.83■■■□□ 2.05
LYSMD2-202ENST00000454181 TTLL4Q14679 1199 aa27.83■■■□□ 2.05
LYSMD2-202ENST00000454181 USH1GQ495M9 461 aa27.83■■■□□ 2.05
LYSMD2-202ENST00000454181 NFRKBQ6P4R8 1299 aa27.83■■■□□ 2.05
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms