RNA–Protein interactions for RNA: ENST00000453306.4

VCX3B-204, Transcript of variable charge X-linked 3B, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene VCX3B, Length 868 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3B-204ENST00000453306 RBM28Q9NW13 759 aaKnown RBP18.15■□□□□ 0.5
VCX3B-204ENST00000453306 V9GY48 417 aaPredicted RBP18.15■□□□□ 0.5
VCX3B-204ENST00000453306 DNM1LO00429 736 aa18.14■□□□□ 0.49
VCX3B-204ENST00000453306 ATP2A1O14983 1001 aa18.14■□□□□ 0.49
VCX3B-204ENST00000453306 FDPSP14324 419 aaKnown RBP18.14■□□□□ 0.49
VCX3B-204ENST00000453306 IFNAR1P17181 557 aa18.14■□□□□ 0.49
VCX3B-204ENST00000453306 ADORA2AP29274 412 aa18.14■□□□□ 0.49
VCX3B-204ENST00000453306 PKN1Q16512 942 aa18.14■□□□□ 0.49
VCX3B-204ENST00000453306 CDC37Q16543 378 aaPredicted RBP18.14■□□□□ 0.49
VCX3B-204ENST00000453306 SNX21Q969T3 373 aa18.14■□□□□ 0.49
VCX3B-204ENST00000453306 LZTS2Q9BRK4 669 aa18.14■□□□□ 0.49
VCX3B-204ENST00000453306 JAK2O60674 1132 aa18.13■□□□□ 0.49
VCX3B-204ENST00000453306 ZBED4O75132 1171 aa18.13■□□□□ 0.49
VCX3B-204ENST00000453306 CYP2C19P33261 490 aa18.13■□□□□ 0.49
VCX3B-204ENST00000453306 STAT3P40763 770 aa18.13■□□□□ 0.49
VCX3B-204ENST00000453306 PPP2R5BQ15173 497 aa18.13■□□□□ 0.49
VCX3B-204ENST00000453306 HOMER1Q86YM7 354 aa18.13■□□□□ 0.49
VCX3B-204ENST00000453306 CCDC83Q8IWF9 413 aa18.13■□□□□ 0.49
VCX3B-204ENST00000453306 ABRAQ8N0Z2 381 aa18.13■□□□□ 0.49
VCX3B-204ENST00000453306 DEFB123Q8N688 67 aa18.13■□□□□ 0.49
VCX3B-204ENST00000453306 ARRDC4Q8NCT1 418 aa18.13■□□□□ 0.49
VCX3B-204ENST00000453306 NSUN7Q8NE18 718 aaKnown RBP18.13■□□□□ 0.49
VCX3B-204ENST00000453306 ZSCAN31Q96LW9 406 aaPredicted RBP18.13■□□□□ 0.49
VCX3B-204ENST00000453306 LBHD1Q9BQE6 289 aaPredicted RBP18.13■□□□□ 0.49
VCX3B-204ENST00000453306 PRKAG2Q9UGJ0 569 aa18.13■□□□□ 0.49
VCX3B-204ENST00000453306 OPLAHO14841 1288 aa18.12■□□□□ 0.49
VCX3B-204ENST00000453306 ZBTB5O15062 677 aa18.12■□□□□ 0.49
VCX3B-204ENST00000453306 ICAM1P05362 532 aa18.12■□□□□ 0.49
VCX3B-204ENST00000453306 ERCC3P19447 782 aa18.12■□□□□ 0.49
VCX3B-204ENST00000453306 PLS1Q14651 629 aa18.12■□□□□ 0.49
VCX3B-204ENST00000453306 TYW1BQ6NUM6 668 aa18.12■□□□□ 0.49
VCX3B-204ENST00000453306 CLEC4DQ8WXI8 215 aa18.12■□□□□ 0.49
VCX3B-204ENST00000453306 A0A0C4DFX4 3053 aa18.12■□□□□ 0.49
VCX3B-204ENST00000453306 CUL9Q8IWT3 2517 aa18.11■□□□□ 0.49
VCX3B-204ENST00000453306 PNMA6FA0A0J9YX94 578 aa18.11■□□□□ 0.49
VCX3B-204ENST00000453306 CCDC196A0A1B0GTZ2 297 aa18.11■□□□□ 0.49
VCX3B-204ENST00000453306 KBTBD13C9JR72 458 aa18.11■□□□□ 0.49
VCX3B-204ENST00000453306 ADAMTS3O15072 1205 aa18.11■□□□□ 0.49
VCX3B-204ENST00000453306 PRPF3O43395 683 aaKnown RBP18.11■□□□□ 0.49
VCX3B-204ENST00000453306 DHX16O60231 1041 aaKnown RBP18.11■□□□□ 0.49
VCX3B-204ENST00000453306 SLC25A27O95847 323 aa18.11■□□□□ 0.49
VCX3B-204ENST00000453306 CYBAP13498 195 aa18.11■□□□□ 0.49
VCX3B-204ENST00000453306 MUM1L1Q5H9M0 696 aa18.11■□□□□ 0.49
VCX3B-204ENST00000453306 SNRNP48Q6IEG0 339 aaKnown RBP18.11■□□□□ 0.49
VCX3B-204ENST00000453306 NCAPG2Q86XI2 1143 aa18.11■□□□□ 0.49
VCX3B-204ENST00000453306 RIOX2Q8IUF8 465 aa18.11■□□□□ 0.49
VCX3B-204ENST00000453306 IL27Q8NEV9 243 aa18.11■□□□□ 0.49
VCX3B-204ENST00000453306 TBC1D5Q92609 795 aa18.11■□□□□ 0.49
VCX3B-204ENST00000453306 AIFM3Q96NN9 605 aa18.11■□□□□ 0.49
VCX3B-204ENST00000453306 PARP14Q460N5 1801 aa18.1■□□□□ 0.49
VCX3B-204ENST00000453306 ZNF236Q9UL36 1845 aa18.1■□□□□ 0.49
VCX3B-204ENST00000453306 SEPT4O43236 478 aa18.1■□□□□ 0.49
VCX3B-204ENST00000453306 IGHA2P01877 340 aa18.1■□□□□ 0.49
VCX3B-204ENST00000453306 FDX1P10109 184 aa18.1■□□□□ 0.49
VCX3B-204ENST00000453306 FCER1AP12319 257 aa18.1■□□□□ 0.49
VCX3B-204ENST00000453306 SLC4A3P48751 1232 aa18.1■□□□□ 0.49
VCX3B-204ENST00000453306 MCM2P49736 904 aa18.1■□□□□ 0.49
VCX3B-204ENST00000453306 OAZ1P54368 228 aa18.1■□□□□ 0.49
VCX3B-204ENST00000453306 MDM2Q00987 491 aaPredicted RBP18.1■□□□□ 0.49
VCX3B-204ENST00000453306 CUL4AQ13619 759 aa18.1■□□□□ 0.49
VCX3B-204ENST00000453306 SLC26A6Q9BXS9 759 aa18.1■□□□□ 0.49
VCX3B-204ENST00000453306 TEX13BQ9BXU2 312 aa18.1■□□□□ 0.49
VCX3B-204ENST00000453306 TSHZ2Q9NRE2 1034 aa18.1■□□□□ 0.49
VCX3B-204ENST00000453306 SH2B1Q9NRF2 756 aaPredicted RBP18.1■□□□□ 0.49
VCX3B-204ENST00000453306 LAMA3Q16787 3333 aa18.1■□□□□ 0.49
VCX3B-204ENST00000453306 A0A0G2JMZ2 1700 aa18.09■□□□□ 0.49
VCX3B-204ENST00000453306 ATN1P54259 1190 aaPredicted RBP18.09■□□□□ 0.49
VCX3B-204ENST00000453306 USH1GQ495M9 461 aa18.09■□□□□ 0.49
VCX3B-204ENST00000453306 WWC2Q6AWC2 1192 aa18.09■□□□□ 0.49
VCX3B-204ENST00000453306 FBXO11Q86XK2 927 aa18.09■□□□□ 0.49
VCX3B-204ENST00000453306 TRPV1Q8NER1 839 aa18.09■□□□□ 0.49
VCX3B-204ENST00000453306 SMARCC2Q8TAQ2 1214 aa18.09■□□□□ 0.49
VCX3B-204ENST00000453306 GPKOWQ92917 476 aaPredicted RBP eCLIP18.09■□□□□ 0.49
VCX3B-204ENST00000453306 RRP36Q96EU6 259 aaKnown RBP18.09■□□□□ 0.49
VCX3B-204ENST00000453306 GJB4Q9NTQ9 266 aa18.09■□□□□ 0.49
VCX3B-204ENST00000453306 CCPG1Q9ULG6 757 aa18.09■□□□□ 0.49
VCX3B-204ENST00000453306 NFIBO00712 420 aa18.08■□□□□ 0.48
VCX3B-204ENST00000453306 ALAS1P13196 640 aa18.08■□□□□ 0.48
VCX3B-204ENST00000453306 COPB2P35606 906 aa18.08■□□□□ 0.48
VCX3B-204ENST00000453306 PFKFB3Q16875 520 aaPredicted RBP18.08■□□□□ 0.48
VCX3B-204ENST00000453306 DDX11Q96FC9 970 aa18.08■□□□□ 0.48
VCX3B-204ENST00000453306 RNF26Q9BY78 433 aaPredicted RBP18.08■□□□□ 0.48
VCX3B-204ENST00000453306 HOMER2Q9NSB8 354 aa18.08■□□□□ 0.48
VCX3B-204ENST00000453306 FRMPD3Q5JV73 1810 aa18.07■□□□□ 0.48
VCX3B-204ENST00000453306 PTPDC1A2A3K4 754 aa18.07■□□□□ 0.48
VCX3B-204ENST00000453306 K7ELQ4 463 aaPredicted RBP18.07■□□□□ 0.48
VCX3B-204ENST00000453306 CPLX1O14810 134 aa18.07■□□□□ 0.48
VCX3B-204ENST00000453306 COBLO75128 1261 aa18.07■□□□□ 0.48
VCX3B-204ENST00000453306 RTP1P59025 263 aa18.07■□□□□ 0.48
VCX3B-204ENST00000453306 SSRP1Q08945 709 aaKnown RBP18.07■□□□□ 0.48
VCX3B-204ENST00000453306 GJC2Q5T442 439 aaPredicted RBP18.07■□□□□ 0.48
VCX3B-204ENST00000453306 MAML3Q96JK9 1138 aa18.07■□□□□ 0.48
VCX3B-204ENST00000453306 TRERF1Q96PN7 1200 aa18.07■□□□□ 0.48
VCX3B-204ENST00000453306 PURBQ96QR8 312 aaKnown RBP18.07■□□□□ 0.48
VCX3B-204ENST00000453306 MMP19Q99542 508 aa18.07■□□□□ 0.48
VCX3B-204ENST00000453306 AMNQ9BXJ7 453 aa18.07■□□□□ 0.48
VCX3B-204ENST00000453306 RNF146Q9NTX7 359 aa18.07■□□□□ 0.48
VCX3B-204ENST00000453306 NRBP1Q9UHY1 535 aa18.07■□□□□ 0.48
VCX3B-204ENST00000453306 STXBP5LQ9Y2K9 1186 aa18.07■□□□□ 0.48
VCX3B-204ENST00000453306 PCDHA1Q9Y5I3 950 aa18.07■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms