RNA–Protein interactions for RNA: ENST00000452441.5

DDR1-239, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene DDR1, Length 3,857 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-239ENST00000452441 SV2BQ7L1I2 683 aa12.44□□□□□ -0.42
DDR1-239ENST00000452441 CCDC84Q86UT8 332 aaPredicted RBP12.44□□□□□ -0.42
DDR1-239ENST00000452441 OR8K1Q8NGG5 319 aa12.44□□□□□ -0.42
DDR1-239ENST00000452441 TEKT1Q969V4 418 aa12.44□□□□□ -0.42
DDR1-239ENST00000452441 MRFAP1Q9Y605 127 aa12.44□□□□□ -0.42
DDR1-239ENST00000452441 DUSP10Q9Y6W6 482 aa12.44□□□□□ -0.42
DDR1-239ENST00000452441 ACTN4O43707 911 aaKnown RBP12.43□□□□□ -0.42
DDR1-239ENST00000452441 KRT86O43790 486 aa12.43□□□□□ -0.42
DDR1-239ENST00000452441 USO1O60763 962 aaKnown RBP12.43□□□□□ -0.42
DDR1-239ENST00000452441 TBC1D8O95759 1140 aa12.43□□□□□ -0.42
DDR1-239ENST00000452441 CYLC1P35663 651 aaPredicted RBP12.43□□□□□ -0.42
DDR1-239ENST00000452441 MAP3K9P80192 1104 aa12.43□□□□□ -0.42
DDR1-239ENST00000452441 SPAG1Q07617 926 aa12.43□□□□□ -0.42
DDR1-239ENST00000452441 FBXO33Q7Z6M2 555 aa12.43□□□□□ -0.42
DDR1-239ENST00000452441 RIN2Q8WYP3 895 aaPredicted RBP12.43□□□□□ -0.42
DDR1-239ENST00000452441 SMIM23A6NLE4 172 aa12.43□□□□□ -0.42
DDR1-239ENST00000452441 SFI1A8K8P3 1242 aa12.43□□□□□ -0.42
DDR1-239ENST00000452441 AMPD3Q01432 767 aa12.43□□□□□ -0.42
DDR1-239ENST00000452441 TROAPQ12815 778 aa12.43□□□□□ -0.42
DDR1-239ENST00000452441 PPP2R5BQ15173 497 aa12.43□□□□□ -0.42
DDR1-239ENST00000452441 TMC4Q7Z404 712 aa12.43□□□□□ -0.42
DDR1-239ENST00000452441 SEMA3EO15041 775 aa12.43□□□□□ -0.42
DDR1-239ENST00000452441 MDM2Q00987 491 aaPredicted RBP12.43□□□□□ -0.42
DDR1-239ENST00000452441 ZNF512BQ96KM6 892 aaPredicted RBP12.43□□□□□ -0.42
DDR1-239ENST00000452441 CNOT6LQ96LI5 555 aaKnown RBP12.43□□□□□ -0.42
DDR1-239ENST00000452441 GSDMAQ96QA5 445 aa12.43□□□□□ -0.42
DDR1-239ENST00000452441 ACBD3Q9H3P7 528 aa12.43□□□□□ -0.42
DDR1-239ENST00000452441 ABCB6Q9NP58 842 aa12.43□□□□□ -0.42
DDR1-239ENST00000452441 XIRP1Q702N8 1843 aaKnown RBP12.43□□□□□ -0.42
DDR1-239ENST00000452441 ADCY7P51828 1080 aa12.42□□□□□ -0.42
DDR1-239ENST00000452441 DPYDQ12882 1025 aa12.42□□□□□ -0.42
DDR1-239ENST00000452441 TTLL12Q14166 644 aaPredicted RBP12.42□□□□□ -0.42
DDR1-239ENST00000452441 KIFC2Q96AC6 838 aa12.42□□□□□ -0.42
DDR1-239ENST00000452441 ADGRG1Q9Y653 693 aa12.42□□□□□ -0.42
DDR1-239ENST00000452441 USP17L15C9J2P7 530 aa12.42□□□□□ -0.42
DDR1-239ENST00000452441 USP17L13C9JLJ4 530 aa12.42□□□□□ -0.42
DDR1-239ENST00000452441 USP17L11C9JVI0 530 aa12.42□□□□□ -0.42
DDR1-239ENST00000452441 USP17L18D6R9N7 530 aa12.42□□□□□ -0.42
DDR1-239ENST00000452441 USP17L22D6RA61 530 aa12.42□□□□□ -0.42
DDR1-239ENST00000452441 USP17L17D6RBQ6 530 aa12.42□□□□□ -0.42
DDR1-239ENST00000452441 USP17L19D6RCP7 530 aa12.42□□□□□ -0.42
DDR1-239ENST00000452441 USP17L20D6RJB6 530 aa12.42□□□□□ -0.42
DDR1-239ENST00000452441 PAFAH1B1P43034 410 aa12.42□□□□□ -0.42
DDR1-239ENST00000452441 C2orf54Q08AI8 447 aa12.42□□□□□ -0.42
DDR1-239ENST00000452441 USP17L24Q0WX57 530 aa12.42□□□□□ -0.42
DDR1-239ENST00000452441 USP17L6PQ6QN14 398 aa12.42□□□□□ -0.42
DDR1-239ENST00000452441 AMIGO3Q86WK7 504 aa12.42□□□□□ -0.42
DDR1-239ENST00000452441 TMTC1Q8IUR5 882 aa12.42□□□□□ -0.42
DDR1-239ENST00000452441 KLHL7Q8IXQ5 586 aa12.42□□□□□ -0.42
DDR1-239ENST00000452441 CEP112Q8N8E3 955 aa12.42□□□□□ -0.42
DDR1-239ENST00000452441 TSPYL1Q9H0U9 437 aa12.42□□□□□ -0.42
DDR1-239ENST00000452441 TDRD3Q9H7E2 651 aaKnown RBP12.42□□□□□ -0.42
DDR1-239ENST00000452441 FAM205AQ6ZU69 1335 aa12.42□□□□□ -0.42
DDR1-239ENST00000452441 TNKS1BP1Q9C0C2 1729 aaKnown RBP12.42□□□□□ -0.42
DDR1-239ENST00000452441 GTPBP6O43824 516 aaPredicted RBP12.42□□□□□ -0.42
DDR1-239ENST00000452441 N4BP1O75113 896 aaKnown RBP12.42□□□□□ -0.42
DDR1-239ENST00000452441 MFAP3LO75121 409 aa12.42□□□□□ -0.42
DDR1-239ENST00000452441 SLIT2O94813 1529 aa12.42□□□□□ -0.42
DDR1-239ENST00000452441 TBX2Q13207 712 aaPredicted RBP12.42□□□□□ -0.42
DDR1-239ENST00000452441 PKN1Q16512 942 aa12.42□□□□□ -0.42
DDR1-239ENST00000452441 TMEM132AQ24JP5 1023 aa12.42□□□□□ -0.42
DDR1-239ENST00000452441 KCTD16Q68DU8 428 aa12.42□□□□□ -0.42
DDR1-239ENST00000452441 TTBK2Q6IQ55 1244 aa12.42□□□□□ -0.42
DDR1-239ENST00000452441 POTEDQ86YR6 584 aa12.42□□□□□ -0.42
DDR1-239ENST00000452441 TSG101Q99816 390 aa12.42□□□□□ -0.42
DDR1-239ENST00000452441 CCDC113Q9H0I3 377 aa12.42□□□□□ -0.42
DDR1-239ENST00000452441 GOPCQ9HD26 462 aa12.42□□□□□ -0.42
DDR1-239ENST00000452441 ZKSCAN7Q9P0L1 754 aaPredicted RBP12.42□□□□□ -0.42
DDR1-239ENST00000452441 MYO6Q9UM54 1294 aa12.42□□□□□ -0.42
DDR1-239ENST00000452441 FAN1Q9Y2M0 1017 aa12.42□□□□□ -0.42
DDR1-239ENST00000452441 FAM237AA0A1B0GTK4 181 aa12.41□□□□□ -0.42
DDR1-239ENST00000452441 SPDYE3A6NKU9 549 aa12.41□□□□□ -0.42
DDR1-239ENST00000452441 H0YHG0 523 aa12.41□□□□□ -0.42
DDR1-239ENST00000452441 TDP2O95551 362 aa12.41□□□□□ -0.42
DDR1-239ENST00000452441 ZNF18P17022 549 aa12.41□□□□□ -0.42
DDR1-239ENST00000452441 GUCY2FP51841 1108 aa12.41□□□□□ -0.42
DDR1-239ENST00000452441 RASSF7Q02833 373 aa12.41□□□□□ -0.42
DDR1-239ENST00000452441 EN1Q05925 392 aaPredicted RBP12.41□□□□□ -0.42
DDR1-239ENST00000452441 TCP11X2Q5H9J9 407 aa12.41□□□□□ -0.42
DDR1-239ENST00000452441 TBC1D22AQ8WUA7 517 aa12.41□□□□□ -0.42
DDR1-239ENST00000452441 CUL5Q93034 780 aa12.41□□□□□ -0.42
DDR1-239ENST00000452441 MED15Q96RN5 788 aa12.41□□□□□ -0.42
DDR1-239ENST00000452441 SH2D3AQ9BRG2 576 aa12.41□□□□□ -0.42
DDR1-239ENST00000452441 EHD2Q9NZN4 543 aa12.41□□□□□ -0.42
DDR1-239ENST00000452441 SERPINB13Q9UIV8 391 aa12.41□□□□□ -0.42
DDR1-239ENST00000452441 PCDHA4Q9UN74 947 aa12.41□□□□□ -0.42
DDR1-239ENST00000452441 PMS1P54277 932 aaKnown RBP12.41□□□□□ -0.42
DDR1-239ENST00000452441 CT47A1Q5JQC4 288 aaPredicted RBP12.41□□□□□ -0.42
DDR1-239ENST00000452441 C12orf60Q5U649 245 aa12.41□□□□□ -0.42
DDR1-239ENST00000452441 BARGINQ6ZT62 677 aa12.41□□□□□ -0.42
DDR1-239ENST00000452441 RABGGTAQ92696 567 aa12.41□□□□□ -0.42
DDR1-239ENST00000452441 PACSIN2Q9UNF0 486 aaPredicted RBP12.41□□□□□ -0.42
DDR1-239ENST00000452441 C4AP0C0L4 1744 aa12.41□□□□□ -0.42
DDR1-239ENST00000452441 C4BP0C0L5 1744 aa12.41□□□□□ -0.42
DDR1-239ENST00000452441 TMEM110-MUSTN1A8MSY1 372 aa12.41□□□□□ -0.42
DDR1-239ENST00000452441 BBOX1O75936 387 aa12.41□□□□□ -0.42
DDR1-239ENST00000452441 GYPCP04921 128 aa12.41□□□□□ -0.42
DDR1-239ENST00000452441 OR52Z1P0C646 297 aa12.41□□□□□ -0.42
DDR1-239ENST00000452441 MAGEA1P43355 309 aa12.41□□□□□ -0.42
DDR1-239ENST00000452441 STK4Q13043 487 aa12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms