RNA–Protein interactions for RNA: ENST00000450303.6

PRPF40A-204, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 3

Gene PRPF40A, Length 496 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-204ENST00000450303 TMEM63BQ5T3F8 832 aa19.83■□□□□ 0.77
PRPF40A-204ENST00000450303 CCSAPQ6IQ19 270 aaPredicted RBP19.83■□□□□ 0.77
PRPF40A-204ENST00000450303 STOX1Q6ZVD7 989 aa19.83■□□□□ 0.77
PRPF40A-204ENST00000450303 STAG2Q8N3U4 1231 aa19.83■□□□□ 0.77
PRPF40A-204ENST00000450303 TBC1D32Q96NH3 1257 aa19.83■□□□□ 0.77
PRPF40A-204ENST00000450303 LBHD1Q9BQE6 289 aaPredicted RBP19.83■□□□□ 0.77
PRPF40A-204ENST00000450303 SPC25Q9HBM1 224 aa19.83■□□□□ 0.77
PRPF40A-204ENST00000450303 WDR19Q8NEZ3 1342 aa19.82■□□□□ 0.76
PRPF40A-204ENST00000450303 IFIT3O14879 490 aaKnown RBP19.82■□□□□ 0.76
PRPF40A-204ENST00000450303 GJA9P57773 515 aa19.82■□□□□ 0.76
PRPF40A-204ENST00000450303 GNASQ5JWF2 1037 aa19.82■□□□□ 0.76
PRPF40A-204ENST00000450303 TAPT1Q6NXT6 567 aa19.82■□□□□ 0.76
PRPF40A-204ENST00000450303 RALYLQ86SE5 291 aaKnown RBP19.82■□□□□ 0.76
PRPF40A-204ENST00000450303 TBC1D5Q92609 795 aa19.82■□□□□ 0.76
PRPF40A-204ENST00000450303 VTI1AQ96AJ9 217 aa19.82■□□□□ 0.76
PRPF40A-204ENST00000450303 LRCH3Q96II8 777 aa19.82■□□□□ 0.76
PRPF40A-204ENST00000450303 UPF3AQ9H1J1 476 aaKnown RBP19.82■□□□□ 0.76
PRPF40A-204ENST00000450303 SENP2Q9HC62 589 aa19.82■□□□□ 0.76
PRPF40A-204ENST00000450303 STARD7Q9NQZ5 370 aa19.82■□□□□ 0.76
PRPF40A-204ENST00000450303 PDLIM7Q9NR12 457 aa19.82■□□□□ 0.76
PRPF40A-204ENST00000450303 PNMA2Q9UL42 364 aa19.82■□□□□ 0.76
PRPF40A-204ENST00000450303 SNX14Q9Y5W7 946 aa19.82■□□□□ 0.76
PRPF40A-204ENST00000450303 TRIM43BA6NCK2 446 aa19.81■□□□□ 0.76
PRPF40A-204ENST00000450303 MOXD2PA6NHM9 499 aa19.81■□□□□ 0.76
PRPF40A-204ENST00000450303 PQBP1O60828 265 aaKnown RBP19.81■□□□□ 0.76
PRPF40A-204ENST00000450303 ASGR1P07306 291 aa19.81■□□□□ 0.76
PRPF40A-204ENST00000450303 SMPD1P17405 629 aa19.81■□□□□ 0.76
PRPF40A-204ENST00000450303 RPS6P62753 249 aaKnown RBP19.81■□□□□ 0.76
PRPF40A-204ENST00000450303 QRICH1Q2TAL8 776 aa19.81■□□□□ 0.76
PRPF40A-204ENST00000450303 C1orf53Q5VUE5 145 aa19.81■□□□□ 0.76
PRPF40A-204ENST00000450303 NCOA7Q8NI08 942 aa19.81■□□□□ 0.76
PRPF40A-204ENST00000450303 NUP133Q8WUM0 1156 aa19.81■□□□□ 0.76
PRPF40A-204ENST00000450303 TRIM43Q96BQ3 446 aaPredicted RBP19.81■□□□□ 0.76
PRPF40A-204ENST00000450303 ANP32EQ9BTT0 268 aa19.81■□□□□ 0.76
PRPF40A-204ENST00000450303 JMJD4Q9H9V9 463 aa19.81■□□□□ 0.76
PRPF40A-204ENST00000450303 ADD3Q9UEY8 706 aaKnown RBP19.81■□□□□ 0.76
PRPF40A-204ENST00000450303 LTBP2Q14767 1821 aa19.81■□□□□ 0.76
PRPF40A-204ENST00000450303 CTAGE5O15320 804 aa19.8■□□□□ 0.76
PRPF40A-204ENST00000450303 DYNC1LI2O43237 492 aaPredicted RBP19.8■□□□□ 0.76
PRPF40A-204ENST00000450303 HMGB1P09429 215 aaKnown RBP19.8■□□□□ 0.76
PRPF40A-204ENST00000450303 CST5P28325 142 aaPredicted RBP19.8■□□□□ 0.76
PRPF40A-204ENST00000450303 RASEFQ8IZ41 740 aa19.8■□□□□ 0.76
PRPF40A-204ENST00000450303 TDHQ8IZJ6 230 aa19.8■□□□□ 0.76
PRPF40A-204ENST00000450303 PCSK9Q8NBP7 692 aaKnown RBP19.8■□□□□ 0.76
PRPF40A-204ENST00000450303 MORC4Q8TE76 937 aa19.8■□□□□ 0.76
PRPF40A-204ENST00000450303 NEK1Q96PY6 1258 aa19.8■□□□□ 0.76
PRPF40A-204ENST00000450303 GNEQ9Y223 722 aaKnown RBP19.8■□□□□ 0.76
PRPF40A-204ENST00000450303 KLRF2D3W0D1 207 aa19.79■□□□□ 0.76
PRPF40A-204ENST00000450303 IQSEC1Q6DN90 963 aa19.79■□□□□ 0.76
PRPF40A-204ENST00000450303 TLK2Q86UE8 772 aa19.79■□□□□ 0.76
PRPF40A-204ENST00000450303 FBXO11Q86XK2 927 aa19.79■□□□□ 0.76
PRPF40A-204ENST00000450303 IL27Q8NEV9 243 aa19.79■□□□□ 0.76
PRPF40A-204ENST00000450303 BADQ92934 168 aa19.79■□□□□ 0.76
PRPF40A-204ENST00000450303 GLT1D1Q96MS3 346 aa19.79■□□□□ 0.76
PRPF40A-204ENST00000450303 TM6SF1Q9BZW5 370 aa19.79■□□□□ 0.76
PRPF40A-204ENST00000450303 AP5M1Q9H0R1 490 aa19.79■□□□□ 0.76
PRPF40A-204ENST00000450303 VTA1Q9NP79 307 aa19.79■□□□□ 0.76
PRPF40A-204ENST00000450303 MAD2L2Q9UI95 211 aa19.79■□□□□ 0.76
PRPF40A-204ENST00000450303 ABCB11O95342 1321 aa19.78■□□□□ 0.76
PRPF40A-204ENST00000450303 ERICH2A1L162 156 aa19.78■□□□□ 0.76
PRPF40A-204ENST00000450303 CLTBP09497 229 aa19.78■□□□□ 0.76
PRPF40A-204ENST00000450303 ANTXR2P58335 489 aa19.78■□□□□ 0.76
PRPF40A-204ENST00000450303 WTAPQ15007 396 aa19.78■□□□□ 0.76
PRPF40A-204ENST00000450303 IL17RAQ96F46 866 aa19.78■□□□□ 0.76
PRPF40A-204ENST00000450303 JAKMIP1Q96N16 626 aaKnown RBP19.78■□□□□ 0.76
PRPF40A-204ENST00000450303 BAZ2BQ9UIF8 2168 aaKnown RBP19.78■□□□□ 0.76
PRPF40A-204ENST00000450303 PALM3A6NDB9 673 aaPredicted RBP19.77■□□□□ 0.76
PRPF40A-204ENST00000450303 ITGB8P26012 769 aa19.77■□□□□ 0.76
PRPF40A-204ENST00000450303 PDE4DQ08499 809 aa19.77■□□□□ 0.76
PRPF40A-204ENST00000450303 TMEM67Q5HYA8 995 aa19.77■□□□□ 0.76
PRPF40A-204ENST00000450303 BLOC1S2Q6QNY1 142 aa19.77■□□□□ 0.76
PRPF40A-204ENST00000450303 WDR11Q9BZH6 1224 aa19.77■□□□□ 0.76
PRPF40A-204ENST00000450303 FAAP100Q0VG06 881 aa19.76■□□□□ 0.75
PRPF40A-204ENST00000450303 GRM4Q14833 912 aa19.76■□□□□ 0.75
PRPF40A-204ENST00000450303 FSCN1Q16658 493 aaKnown RBP19.76■□□□□ 0.75
PRPF40A-204ENST00000450303 SLC35G1Q2M3R5 365 aa19.76■□□□□ 0.75
PRPF40A-204ENST00000450303 CXCL17Q6UXB2 119 aa19.76■□□□□ 0.75
PRPF40A-204ENST00000450303 MB21D2Q8IYB1 491 aaPredicted RBP19.76■□□□□ 0.75
PRPF40A-204ENST00000450303 RGS22Q8NE09 1264 aa19.76■□□□□ 0.75
PRPF40A-204ENST00000450303 TAAR1Q96RJ0 339 aa19.76■□□□□ 0.75
PRPF40A-204ENST00000450303 GPHNQ9NQX3 736 aaPredicted RBP19.76■□□□□ 0.75
PRPF40A-204ENST00000450303 TMEM39AQ9NV64 488 aa19.76■□□□□ 0.75
PRPF40A-204ENST00000450303 CYP46A1Q9Y6A2 500 aa19.76■□□□□ 0.75
PRPF40A-204ENST00000450303 ELP1O95163 1332 aa19.76■□□□□ 0.75
PRPF40A-204ENST00000450303 DCDC2CA8MYV0 355 aa19.75■□□□□ 0.75
PRPF40A-204ENST00000450303 PPP1R11O60927 126 aaPredicted RBP19.75■□□□□ 0.75
PRPF40A-204ENST00000450303 CASTP20810 708 aaKnown RBP19.75■□□□□ 0.75
PRPF40A-204ENST00000450303 MCM5P33992 734 aa19.75■□□□□ 0.75
PRPF40A-204ENST00000450303 NKX3-2P78367 333 aa19.75■□□□□ 0.75
PRPF40A-204ENST00000450303 COL9A3Q14050 684 aaPredicted RBP19.75■□□□□ 0.75
PRPF40A-204ENST00000450303 SART3Q15020 963 aaKnown RBP19.75■□□□□ 0.75
PRPF40A-204ENST00000450303 RABEP1Q15276 862 aa19.75■□□□□ 0.75
PRPF40A-204ENST00000450303 ADCK5Q3MIX3 580 aa19.75■□□□□ 0.75
PRPF40A-204ENST00000450303 ANKRD33Q7Z3H0 272 aa19.75■□□□□ 0.75
PRPF40A-204ENST00000450303 HOMER1Q86YM7 354 aa19.75■□□□□ 0.75
PRPF40A-204ENST00000450303 DNERQ8NFT8 737 aa19.75■□□□□ 0.75
PRPF40A-204ENST00000450303 SYTL5Q8TDW5 730 aaPredicted RBP19.75■□□□□ 0.75
PRPF40A-204ENST00000450303 IGDCC4Q8TDY8 1250 aa19.75■□□□□ 0.75
PRPF40A-204ENST00000450303 COL20A1Q9P218 1284 aa19.75■□□□□ 0.75
PRPF40A-204ENST00000450303 MRPL11Q9Y3B7 192 aaKnown RBP19.75■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms