RNA–Protein interactions for RNA: ENST00000449880.6

ITGB4-202, Transcript of integrin subunit beta 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene ITGB4, Length 5,689 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB4-202ENST00000449880 NCAPGQ9BPX3 1015 aa15.21■□□□□ 0.03
ITGB4-202ENST00000449880 SEC23IPQ9Y6Y8 1000 aaKnown RBP15.21■□□□□ 0.03
ITGB4-202ENST00000449880 CARMIL3Q8ND23 1372 aa15.21■□□□□ 0.03
ITGB4-202ENST00000449880 NOP56O00567 594 aaKnown RBP15.21■□□□□ 0.03
ITGB4-202ENST00000449880 THAP12O43422 761 aa15.21■□□□□ 0.03
ITGB4-202ENST00000449880 KCTD16Q68DU8 428 aa15.21■□□□□ 0.03
ITGB4-202ENST00000449880 CDAN1Q8IWY9 1227 aa15.21■□□□□ 0.03
ITGB4-202ENST00000449880 MYOCDQ8IZQ8 938 aa15.21■□□□□ 0.03
ITGB4-202ENST00000449880 CFAP61Q8NHU2 1237 aa15.21■□□□□ 0.03
ITGB4-202ENST00000449880 PUS3Q9BZE2 481 aaKnown RBP15.21■□□□□ 0.03
ITGB4-202ENST00000449880 FOXP1Q9H334 677 aaPredicted RBP15.21■□□□□ 0.03
ITGB4-202ENST00000449880 CLIC4Q9Y696 253 aa15.21■□□□□ 0.03
ITGB4-202ENST00000449880 GOLGA8QA0A0J9YX86 632 aa15.21■□□□□ 0.03
ITGB4-202ENST00000449880 GOLGA8OA6NCC3 632 aa15.21■□□□□ 0.03
ITGB4-202ENST00000449880 GOLGA8NF8WBI6 632 aa15.21■□□□□ 0.03
ITGB4-202ENST00000449880 TRAPPC10P48553 1259 aa15.21■□□□□ 0.03
ITGB4-202ENST00000449880 SCRN1Q12765 414 aa15.21■□□□□ 0.03
ITGB4-202ENST00000449880 KRT12Q99456 494 aa15.21■□□□□ 0.03
ITGB4-202ENST00000449880 GREM2Q9H772 168 aa15.21■□□□□ 0.03
ITGB4-202ENST00000449880 PSD3Q9NYI0 1048 aa15.21■□□□□ 0.03
ITGB4-202ENST00000449880 PKD2L1Q9P0L9 805 aa15.21■□□□□ 0.03
ITGB4-202ENST00000449880 H0YIN7 160 aa15.21■□□□□ 0.02
ITGB4-202ENST00000449880 MAP3K7O43318 606 aa15.21■□□□□ 0.02
ITGB4-202ENST00000449880 H2AFZP0C0S5 128 aa15.21■□□□□ 0.02
ITGB4-202ENST00000449880 HARSP12081 509 aaKnown RBP15.21■□□□□ 0.02
ITGB4-202ENST00000449880 IRX1P78414 480 aaPredicted RBP15.21■□□□□ 0.02
ITGB4-202ENST00000449880 H2AFVQ71UI9 128 aa15.21■□□□□ 0.02
ITGB4-202ENST00000449880 MYL10Q9BUA6 226 aa15.21■□□□□ 0.02
ITGB4-202ENST00000449880 METTL14Q9HCE5 456 aaKnown RBP15.21■□□□□ 0.02
ITGB4-202ENST00000449880 USP21Q9UK80 565 aa15.21■□□□□ 0.02
ITGB4-202ENST00000449880 ARHGEF35A5YM69 484 aa15.2■□□□□ 0.02
ITGB4-202ENST00000449880 LAD1O00515 517 aa15.2■□□□□ 0.02
ITGB4-202ENST00000449880 DPP8Q6V1X1 898 aaPredicted RBP15.2■□□□□ 0.02
ITGB4-202ENST00000449880 ANKRD35Q8N283 1001 aa15.2■□□□□ 0.02
ITGB4-202ENST00000449880 KIFC2Q96AC6 838 aa15.2■□□□□ 0.02
ITGB4-202ENST00000449880 MED23Q9ULK4 1368 aa15.2■□□□□ 0.02
ITGB4-202ENST00000449880 ANO9A1A5B4 782 aa15.2■□□□□ 0.02
ITGB4-202ENST00000449880 PDIA3P30101 505 aaKnown RBP15.2■□□□□ 0.02
ITGB4-202ENST00000449880 LMNB2Q03252 620 aa15.2■□□□□ 0.02
ITGB4-202ENST00000449880 CALCRLQ16602 461 aa15.2■□□□□ 0.02
ITGB4-202ENST00000449880 SPATA31A3Q5VYP0 1347 aa15.2■□□□□ 0.02
ITGB4-202ENST00000449880 CREB3O43889 395 aa15.2■□□□□ 0.02
ITGB4-202ENST00000449880 ZBED4O75132 1171 aa15.2■□□□□ 0.02
ITGB4-202ENST00000449880 RESTQ13127 1097 aa15.2■□□□□ 0.02
ITGB4-202ENST00000449880 SRLQ86TD4 932 aa15.2■□□□□ 0.02
ITGB4-202ENST00000449880 U2AF1L4Q8WU68 220 aaKnown RBP15.2■□□□□ 0.02
ITGB4-202ENST00000449880 RWDD2AQ9UIY3 292 aa15.2■□□□□ 0.02
ITGB4-202ENST00000449880 PCDHA5Q9Y5H7 936 aa15.2■□□□□ 0.02
ITGB4-202ENST00000449880 ARHGAP42A6NI28 874 aa15.2■□□□□ 0.02
ITGB4-202ENST00000449880 PGRMC1O00264 195 aaKnown RBP15.2■□□□□ 0.02
ITGB4-202ENST00000449880 PRDM1O75626 825 aa15.2■□□□□ 0.02
ITGB4-202ENST00000449880 HERC4Q5GLZ8 1057 aaPredicted RBP15.2■□□□□ 0.02
ITGB4-202ENST00000449880 LARGE2Q8N3Y3 721 aa15.2■□□□□ 0.02
ITGB4-202ENST00000449880 SH3GL3Q99963 347 aa15.2■□□□□ 0.02
ITGB4-202ENST00000449880 RIMBP3CA6NJZ7 1639 aa15.2■□□□□ 0.02
ITGB4-202ENST00000449880 RIMBP3BA6NNM3 1639 aa15.2■□□□□ 0.02
ITGB4-202ENST00000449880 RIMBP3Q9UFD9 1639 aa15.2■□□□□ 0.02
ITGB4-202ENST00000449880 HGSO14964 777 aaPredicted RBP15.19■□□□□ 0.02
ITGB4-202ENST00000449880 ADCY7P51828 1080 aa15.19■□□□□ 0.02
ITGB4-202ENST00000449880 ANKRD20A4Q4UJ75 823 aa15.19■□□□□ 0.02
ITGB4-202ENST00000449880 ANKRD20A8PQ5CZ79 823 aa15.19■□□□□ 0.02
ITGB4-202ENST00000449880 ANKRD20A2Q5SQ80 823 aa15.19■□□□□ 0.02
ITGB4-202ENST00000449880 ANKRD20A1Q5TYW2 823 aa15.19■□□□□ 0.02
ITGB4-202ENST00000449880 EPB41L5Q9HCM4 733 aa15.19■□□□□ 0.02
ITGB4-202ENST00000449880 AXIN2Q9Y2T1 843 aa15.19■□□□□ 0.02
ITGB4-202ENST00000449880 SART1O43290 800 aaKnown RBP15.19■□□□□ 0.02
ITGB4-202ENST00000449880 ECM2O94769 699 aaPredicted RBP15.19■□□□□ 0.02
ITGB4-202ENST00000449880 ATF2P15336 505 aa15.19■□□□□ 0.02
ITGB4-202ENST00000449880 ARHGAP18Q8N392 663 aa15.19■□□□□ 0.02
ITGB4-202ENST00000449880 CCDC24Q8N4L8 307 aa15.19■□□□□ 0.02
ITGB4-202ENST00000449880 LINC00301Q8NCQ3 95 aa15.19■□□□□ 0.02
ITGB4-202ENST00000449880 KCNJ14Q9UNX9 436 aa15.19■□□□□ 0.02
ITGB4-202ENST00000449880 CTNND1O60716 968 aaKnown RBP15.19■□□□□ 0.02
ITGB4-202ENST00000449880 XRCC5P13010 732 aaKnown RBP15.19■□□□□ 0.02
ITGB4-202ENST00000449880 IL6STP40189 918 aaPredicted RBP15.19■□□□□ 0.02
ITGB4-202ENST00000449880 ADCK5Q3MIX3 580 aa15.19■□□□□ 0.02
ITGB4-202ENST00000449880 CCT6BQ92526 530 aa15.19■□□□□ 0.02
ITGB4-202ENST00000449880 RNF34Q969K3 372 aa15.19■□□□□ 0.02
ITGB4-202ENST00000449880 DTNBP1Q96EV8 351 aa15.19■□□□□ 0.02
ITGB4-202ENST00000449880 TACC3Q9Y6A5 838 aa15.19■□□□□ 0.02
ITGB4-202ENST00000449880 PREX1Q8TCU6 1659 aa15.19■□□□□ 0.02
ITGB4-202ENST00000449880 CFAP73A6NFT4 308 aa15.19■□□□□ 0.02
ITGB4-202ENST00000449880 CNGA1P29973 690 aa15.19■□□□□ 0.02
ITGB4-202ENST00000449880 PDE1CQ14123 709 aaPredicted RBP15.19■□□□□ 0.02
ITGB4-202ENST00000449880 TTC19Q6DKK2 380 aaPredicted RBP15.19■□□□□ 0.02
ITGB4-202ENST00000449880 DPH5Q9H2P9 285 aa15.19■□□□□ 0.02
ITGB4-202ENST00000449880 DNM3Q9UQ16 869 aa15.19■□□□□ 0.02
ITGB4-202ENST00000449880 PDE6AP16499 860 aa15.19■□□□□ 0.02
ITGB4-202ENST00000449880 TXKP42681 527 aa15.19■□□□□ 0.02
ITGB4-202ENST00000449880 CCDC89Q8N998 374 aa15.19■□□□□ 0.02
ITGB4-202ENST00000449880 NSUN7Q8NE18 718 aaKnown RBP15.19■□□□□ 0.02
ITGB4-202ENST00000449880 THAP9Q9H5L6 903 aa15.19■□□□□ 0.02
ITGB4-202ENST00000449880 ATG3Q9NT62 314 aa15.19■□□□□ 0.02
ITGB4-202ENST00000449880 KCNG1Q9UIX4 513 aa15.19■□□□□ 0.02
ITGB4-202ENST00000449880 IQSEC2Q5JU85 1478 aa15.19■□□□□ 0.02
ITGB4-202ENST00000449880 NRKQ7Z2Y5 1582 aa15.18■□□□□ 0.02
ITGB4-202ENST00000449880 BUB1O43683 1085 aa15.18■□□□□ 0.02
ITGB4-202ENST00000449880 BAG2O95816 211 aa15.18■□□□□ 0.02
ITGB4-202ENST00000449880 ADORA1P30542 326 aa15.18■□□□□ 0.02
ITGB4-202ENST00000449880 CRKLP46109 303 aaKnown RBP15.18■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms