RNA–Protein interactions for RNA: ENST00000449771.6

RAPGEF3-205, Transcript of Rap guanine nucleotide exchange factor 3, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene RAPGEF3, Length 6,061 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3-205ENST00000449771 PRPSAP1Q14558 356 aa15.3■□□□□ 0.04
RAPGEF3-205ENST00000449771 FAM26FQ5R3K3 315 aa15.3■□□□□ 0.04
RAPGEF3-205ENST00000449771 GJA10Q969M2 543 aa15.3■□□□□ 0.04
RAPGEF3-205ENST00000449771 BTBD18B2RXH4 712 aa15.3■□□□□ 0.04
RAPGEF3-205ENST00000449771 CASQ2O14958 399 aaPredicted RBP15.3■□□□□ 0.04
RAPGEF3-205ENST00000449771 PTGDRQ13258 359 aa15.3■□□□□ 0.04
RAPGEF3-205ENST00000449771 AOC3Q16853 763 aa15.3■□□□□ 0.04
RAPGEF3-205ENST00000449771 FAM135BQ49AJ0 1406 aa15.3■□□□□ 0.04
RAPGEF3-205ENST00000449771 SAT1P21673 171 aa15.29■□□□□ 0.04
RAPGEF3-205ENST00000449771 GUCY2FP51841 1108 aa15.29■□□□□ 0.04
RAPGEF3-205ENST00000449771 TSTA3Q13630 321 aaPredicted RBP15.29■□□□□ 0.04
RAPGEF3-205ENST00000449771 DIXDC1Q155Q3 683 aa15.29■□□□□ 0.04
RAPGEF3-205ENST00000449771 KRT71Q3SY84 523 aa15.29■□□□□ 0.04
RAPGEF3-205ENST00000449771 USP28Q96RU2 1077 aa15.29■□□□□ 0.04
RAPGEF3-205ENST00000449771 SAR1BQ9Y6B6 198 aa15.29■□□□□ 0.04
RAPGEF3-205ENST00000449771 BLMP54132 1417 aaPredicted RBP15.29■□□□□ 0.04
RAPGEF3-205ENST00000449771 TTC36A6NLP5 189 aa15.29■□□□□ 0.04
RAPGEF3-205ENST00000449771 ZSCAN20P17040 1043 aaPredicted RBP15.29■□□□□ 0.04
RAPGEF3-205ENST00000449771 PCK1P35558 622 aa15.29■□□□□ 0.04
RAPGEF3-205ENST00000449771 NSFP46459 744 aaKnown RBP15.29■□□□□ 0.04
RAPGEF3-205ENST00000449771 VPS41P49754 854 aa15.29■□□□□ 0.04
RAPGEF3-205ENST00000449771 NOP9Q86U38 636 aaKnown RBP15.29■□□□□ 0.04
RAPGEF3-205ENST00000449771 CCDC13Q8IYE1 715 aa15.29■□□□□ 0.04
RAPGEF3-205ENST00000449771 SLC17A8Q8NDX2 589 aa15.29■□□□□ 0.04
RAPGEF3-205ENST00000449771 SEC31BQ9NQW1 1179 aa15.29■□□□□ 0.04
RAPGEF3-205ENST00000449771 PCDHA4Q9UN74 947 aa15.29■□□□□ 0.04
RAPGEF3-205ENST00000449771 M0R2C6 588 aa15.29■□□□□ 0.04
RAPGEF3-205ENST00000449771 CC2D2BQ6DHV5 1058 aa15.29■□□□□ 0.04
RAPGEF3-205ENST00000449771 CAPN12Q6ZSI9 719 aa15.29■□□□□ 0.04
RAPGEF3-205ENST00000449771 C17orf53Q8N3J3 647 aaPredicted RBP15.29■□□□□ 0.04
RAPGEF3-205ENST00000449771 VCXQ9H320 206 aa15.29■□□□□ 0.04
RAPGEF3-205ENST00000449771 EFCC1Q9HA90 598 aa15.29■□□□□ 0.04
RAPGEF3-205ENST00000449771 IPO11Q9UI26 975 aaKnown RBP15.29■□□□□ 0.04
RAPGEF3-205ENST00000449771 DDX41Q9UJV9 622 aaKnown RBP15.29■□□□□ 0.04
RAPGEF3-205ENST00000449771 SSH2Q76I76 1423 aa15.29■□□□□ 0.04
RAPGEF3-205ENST00000449771 RNF8O76064 485 aa15.29■□□□□ 0.04
RAPGEF3-205ENST00000449771 XPAP23025 273 aaPredicted RBP15.29■□□□□ 0.04
RAPGEF3-205ENST00000449771 SLC16A2P36021 539 aa15.29■□□□□ 0.04
RAPGEF3-205ENST00000449771 MFAP3P55082 362 aa15.29■□□□□ 0.04
RAPGEF3-205ENST00000449771 KCNQ4P56696 695 aa15.29■□□□□ 0.04
RAPGEF3-205ENST00000449771 CCDC93Q567U6 631 aa15.29■□□□□ 0.04
RAPGEF3-205ENST00000449771 RAB3IPQ96QF0 476 aaPredicted RBP15.29■□□□□ 0.04
RAPGEF3-205ENST00000449771 JPH2Q9BR39 696 aaPredicted RBP15.29■□□□□ 0.04
RAPGEF3-205ENST00000449771 SNX25Q9H3E2 840 aa15.29■□□□□ 0.04
RAPGEF3-205ENST00000449771 PALD1Q9ULE6 856 aa15.29■□□□□ 0.04
RAPGEF3-205ENST00000449771 KIF21AQ7Z4S6 1674 aa15.29■□□□□ 0.04
RAPGEF3-205ENST00000449771 WDR46O15213 610 aaKnown RBP15.29■□□□□ 0.04
RAPGEF3-205ENST00000449771 BBOX1O75936 387 aa15.29■□□□□ 0.04
RAPGEF3-205ENST00000449771 ZNF827Q17R98 1081 aa15.29■□□□□ 0.04
RAPGEF3-205ENST00000449771 DALRD3Q5D0E6 543 aaKnown RBP15.29■□□□□ 0.04
RAPGEF3-205ENST00000449771 NLRP7Q8WX94 980 aa15.29■□□□□ 0.04
RAPGEF3-205ENST00000449771 SLC7A3Q8WY07 619 aa15.29■□□□□ 0.04
RAPGEF3-205ENST00000449771 ZSWIM6Q9HCJ5 1215 aa15.29■□□□□ 0.04
RAPGEF3-205ENST00000449771 INO80B-WBP1J3KQ70 363 aa15.28■□□□□ 0.04
RAPGEF3-205ENST00000449771 KIF3CO14782 793 aa15.28■□□□□ 0.04
RAPGEF3-205ENST00000449771 BFSP1Q12934 665 aa15.28■□□□□ 0.04
RAPGEF3-205ENST00000449771 TBC1D10BQ4KMP7 808 aaPredicted RBP15.28■□□□□ 0.04
RAPGEF3-205ENST00000449771 ANKRD20A3Q5VUR7 823 aa15.28■□□□□ 0.04
RAPGEF3-205ENST00000449771 INO80BQ9C086 356 aaPredicted RBP15.28■□□□□ 0.04
RAPGEF3-205ENST00000449771 RGS16O15492 202 aaPredicted RBP15.28■□□□□ 0.04
RAPGEF3-205ENST00000449771 RYBPQ8N488 228 aaPredicted RBP15.28■□□□□ 0.04
RAPGEF3-205ENST00000449771 TSC1Q92574 1164 aa15.28■□□□□ 0.04
RAPGEF3-205ENST00000449771 GOLGA8CPA6NN73 597 aa15.28■□□□□ 0.04
RAPGEF3-205ENST00000449771 GSTA1P08263 222 aa15.28■□□□□ 0.04
RAPGEF3-205ENST00000449771 GSTA2P09210 222 aa15.28■□□□□ 0.04
RAPGEF3-205ENST00000449771 STX2P32856 288 aa15.28■□□□□ 0.04
RAPGEF3-205ENST00000449771 KMT5AQ9NQR1 393 aa15.28■□□□□ 0.04
RAPGEF3-205ENST00000449771 MYCP01106 439 aaPredicted RBP15.28■□□□□ 0.04
RAPGEF3-205ENST00000449771 GSPT1P15170 499 aaKnown RBP15.28■□□□□ 0.04
RAPGEF3-205ENST00000449771 ARPP19P56211 112 aa15.28■□□□□ 0.04
RAPGEF3-205ENST00000449771 RFX6Q8HWS3 928 aa15.28■□□□□ 0.04
RAPGEF3-205ENST00000449771 PI4K2BQ8TCG2 481 aa15.28■□□□□ 0.04
RAPGEF3-205ENST00000449771 HYOU1Q9Y4L1 999 aa15.28■□□□□ 0.04
RAPGEF3-205ENST00000449771 CLIC4Q9Y696 253 aa15.28■□□□□ 0.04
RAPGEF3-205ENST00000449771 ADAT2Q7Z6V5 191 aaKnown RBP15.27■□□□□ 0.04
RAPGEF3-205ENST00000449771 PGBD1Q96JS3 809 aa15.27■□□□□ 0.04
RAPGEF3-205ENST00000449771 NPHP4O75161 1426 aaPredicted RBP15.27■□□□□ 0.04
RAPGEF3-205ENST00000449771 CFAP74Q9C0B2 1584 aa15.27■□□□□ 0.04
RAPGEF3-205ENST00000449771 A6NNZ2 444 aa15.27■□□□□ 0.04
RAPGEF3-205ENST00000449771 H7C0C1 242 aa15.27■□□□□ 0.04
RAPGEF3-205ENST00000449771 THAP12O43422 761 aa15.27■□□□□ 0.04
RAPGEF3-205ENST00000449771 CMA1P23946 247 aa15.27■□□□□ 0.04
RAPGEF3-205ENST00000449771 PDIA3P30101 505 aaKnown RBP15.27■□□□□ 0.04
RAPGEF3-205ENST00000449771 CTNNA1P35221 906 aaKnown RBP15.27■□□□□ 0.04
RAPGEF3-205ENST00000449771 ATP5OP48047 213 aa15.27■□□□□ 0.04
RAPGEF3-205ENST00000449771 PTK2Q05397 1052 aa15.27■□□□□ 0.04
RAPGEF3-205ENST00000449771 PROSER3Q2NL68 480 aa15.27■□□□□ 0.04
RAPGEF3-205ENST00000449771 TUBB8Q3ZCM7 444 aa15.27■□□□□ 0.04
RAPGEF3-205ENST00000449771 GADD45GIP1Q8TAE8 222 aaPredicted RBP15.27■□□□□ 0.04
RAPGEF3-205ENST00000449771 ANAPC5Q9UJX4 755 aa15.27■□□□□ 0.04
RAPGEF3-205ENST00000449771 IREB2P48200 963 aaKnown RBP15.27■□□□□ 0.04
RAPGEF3-205ENST00000449771 STAT2P52630 851 aa15.27■□□□□ 0.04
RAPGEF3-205ENST00000449771 TTBK2Q6IQ55 1244 aa15.27■□□□□ 0.04
RAPGEF3-205ENST00000449771 ZBTB12Q9Y330 459 aaPredicted RBP15.27■□□□□ 0.04
RAPGEF3-205ENST00000449771 RSRC2Q7L4I2 434 aaKnown RBP15.27■□□□□ 0.03
RAPGEF3-205ENST00000449771 TROVE2P10155 538 aaKnown RBP eCLIP15.27■□□□□ 0.03
RAPGEF3-205ENST00000449771 EXOC3L4Q17RC7 722 aa15.27■□□□□ 0.03
RAPGEF3-205ENST00000449771 SH2D4BQ5SQS7 431 aa15.27■□□□□ 0.03
RAPGEF3-205ENST00000449771 S100BP04271 92 aaPredicted RBP15.26■□□□□ 0.03
RAPGEF3-205ENST00000449771 ATF2P15336 505 aa15.26■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 9.4 ms