RNA–Protein interactions for RNA: ENST00000449684.6

LIMS1-210, Transcript of LIM zinc finger domain containing 1, humanhuman

TSL 5

Gene LIMS1, Length 492 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS1-210ENST00000449684 STOX1Q6ZVD7 989 aa18.05■□□□□ 0.48
LIMS1-210ENST00000449684 TLK2Q86UE8 772 aa18.05■□□□□ 0.48
LIMS1-210ENST00000449684 RGS22Q8NE09 1264 aa18.05■□□□□ 0.48
LIMS1-210ENST00000449684 DNERQ8NFT8 737 aa18.05■□□□□ 0.48
LIMS1-210ENST00000449684 AMNQ9BXJ7 453 aa18.05■□□□□ 0.48
LIMS1-210ENST00000449684 PDGFCQ9NRA1 345 aa18.05■□□□□ 0.48
LIMS1-210ENST00000449684 MAD2L2Q9UI95 211 aa18.05■□□□□ 0.48
LIMS1-210ENST00000449684 DNAH12Q6ZR08 3092 aa18.04■□□□□ 0.48
LIMS1-210ENST00000449684 MYADML2A6NDP7 307 aa18.04■□□□□ 0.48
LIMS1-210ENST00000449684 ADCY6O43306 1168 aa18.04■□□□□ 0.48
LIMS1-210ENST00000449684 ASGR1P07306 291 aa18.04■□□□□ 0.48
LIMS1-210ENST00000449684 MCM5P33992 734 aa18.04■□□□□ 0.48
LIMS1-210ENST00000449684 TLE2Q04725 743 aa18.04■□□□□ 0.48
LIMS1-210ENST00000449684 TRAF1Q13077 416 aa18.04■□□□□ 0.48
LIMS1-210ENST00000449684 GRM4Q14833 912 aa18.04■□□□□ 0.48
LIMS1-210ENST00000449684 RNF20Q5VTR2 975 aa18.04■□□□□ 0.48
LIMS1-210ENST00000449684 NFXL1Q6ZNB6 911 aa18.04■□□□□ 0.48
LIMS1-210ENST00000449684 HOMER1Q86YM7 354 aa18.04■□□□□ 0.48
LIMS1-210ENST00000449684 MORC4Q8TE76 937 aa18.04■□□□□ 0.48
LIMS1-210ENST00000449684 MAF1Q9H063 256 aa18.04■□□□□ 0.48
LIMS1-210ENST00000449684 UPF3AQ9H1J1 476 aaKnown RBP18.04■□□□□ 0.48
LIMS1-210ENST00000449684 PALM3A6NDB9 673 aaPredicted RBP18.03■□□□□ 0.48
LIMS1-210ENST00000449684 DCDC2CA8MYV0 355 aa18.03■□□□□ 0.48
LIMS1-210ENST00000449684 SLC27A2O14975 620 aa18.03■□□□□ 0.48
LIMS1-210ENST00000449684 ZBTB5O15062 677 aa18.03■□□□□ 0.48
LIMS1-210ENST00000449684 PRC1O43663 620 aa18.03■□□□□ 0.48
LIMS1-210ENST00000449684 CDC45O75419 566 aa18.03■□□□□ 0.48
LIMS1-210ENST00000449684 SMPD1P17405 629 aa18.03■□□□□ 0.48
LIMS1-210ENST00000449684 IRX5P78411 483 aaPredicted RBP18.03■□□□□ 0.48
LIMS1-210ENST00000449684 BEX3Q00994 111 aa18.03■□□□□ 0.48
LIMS1-210ENST00000449684 CREB3L3Q68CJ9 461 aa18.03■□□□□ 0.48
LIMS1-210ENST00000449684 TAPT1Q6NXT6 567 aa18.03■□□□□ 0.48
LIMS1-210ENST00000449684 MB21D2Q8IYB1 491 aaPredicted RBP18.03■□□□□ 0.48
LIMS1-210ENST00000449684 PCDH10Q9P2E7 1040 aa18.03■□□□□ 0.48
LIMS1-210ENST00000449684 ELP1O95163 1332 aa18.02■□□□□ 0.48
LIMS1-210ENST00000449684 CCDC69A6NI79 296 aa18.02■□□□□ 0.48
LIMS1-210ENST00000449684 CFBP00751 764 aa18.02■□□□□ 0.48
LIMS1-210ENST00000449684 CLTBP09497 229 aa18.02■□□□□ 0.48
LIMS1-210ENST00000449684 KIF5BP33176 963 aa18.02■□□□□ 0.48
LIMS1-210ENST00000449684 FSCN1Q16658 493 aaKnown RBP18.02■□□□□ 0.48
LIMS1-210ENST00000449684 CCSAPQ6IQ19 270 aaPredicted RBP18.02■□□□□ 0.48
LIMS1-210ENST00000449684 TDHQ8IZJ6 230 aa18.02■□□□□ 0.48
LIMS1-210ENST00000449684 TMTC2Q8N394 836 aa18.02■□□□□ 0.48
LIMS1-210ENST00000449684 CTCFLQ8NI51 663 aaPredicted RBP18.02■□□□□ 0.48
LIMS1-210ENST00000449684 IGDCC4Q8TDY8 1250 aa18.02■□□□□ 0.48
LIMS1-210ENST00000449684 WDR11Q9BZH6 1224 aa18.02■□□□□ 0.48
LIMS1-210ENST00000449684 SENP2Q9HC62 589 aa18.02■□□□□ 0.48
LIMS1-210ENST00000449684 GNEQ9Y223 722 aaKnown RBP18.02■□□□□ 0.48
LIMS1-210ENST00000449684 Q9Y3F1 56 aa18.02■□□□□ 0.48
LIMS1-210ENST00000449684 PCDHA1Q9Y5I3 950 aa18.02■□□□□ 0.48
LIMS1-210ENST00000449684 MYH6P13533 1939 aa18.02■□□□□ 0.47
LIMS1-210ENST00000449684 MROH7Q68CQ1 1323 aa18.01■□□□□ 0.47
LIMS1-210ENST00000449684 ANTXR2P58335 489 aa18.01■□□□□ 0.47
LIMS1-210ENST00000449684 ARHGEF16Q5VV41 709 aa18.01■□□□□ 0.47
LIMS1-210ENST00000449684 NSUN6Q8TEA1 469 aaKnown RBP18.01■□□□□ 0.47
LIMS1-210ENST00000449684 TBC1D5Q92609 795 aa18.01■□□□□ 0.47
LIMS1-210ENST00000449684 TMEM87BQ96K49 555 aa18.01■□□□□ 0.47
LIMS1-210ENST00000449684 MTA3Q9BTC8 594 aa18.01■□□□□ 0.47
LIMS1-210ENST00000449684 PDLIM7Q9NR12 457 aa18.01■□□□□ 0.47
LIMS1-210ENST00000449684 TMEM39AQ9NV64 488 aa18.01■□□□□ 0.47
LIMS1-210ENST00000449684 A0A0U1RQG5 324 aaPredicted RBP18■□□□□ 0.47
LIMS1-210ENST00000449684 CABYRO75952 493 aa18■□□□□ 0.47
LIMS1-210ENST00000449684 RAG1P15918 1043 aa18■□□□□ 0.47
LIMS1-210ENST00000449684 TROAPQ12815 778 aa18■□□□□ 0.47
LIMS1-210ENST00000449684 PPP2R5BQ15173 497 aa18■□□□□ 0.47
LIMS1-210ENST00000449684 NECTIN1Q15223 517 aa18■□□□□ 0.47
LIMS1-210ENST00000449684 DUSP28Q4G0W2 176 aa18■□□□□ 0.47
LIMS1-210ENST00000449684 BRDTQ58F21 947 aaPredicted RBP18■□□□□ 0.47
LIMS1-210ENST00000449684 ZNF654Q8IZM8 581 aa18■□□□□ 0.47
LIMS1-210ENST00000449684 SYTL5Q8TDW5 730 aaPredicted RBP18■□□□□ 0.47
LIMS1-210ENST00000449684 TAAR1Q96RJ0 339 aa18■□□□□ 0.47
LIMS1-210ENST00000449684 PIGSQ96S52 555 aa18■□□□□ 0.47
LIMS1-210ENST00000449684 RMDN3Q96TC7 470 aa18■□□□□ 0.47
LIMS1-210ENST00000449684 LY9Q9HBG7 655 aa18■□□□□ 0.47
LIMS1-210ENST00000449684 GPHNQ9NQX3 736 aaPredicted RBP18■□□□□ 0.47
LIMS1-210ENST00000449684 TLR3O15455 904 aaKnown RBP17.99■□□□□ 0.47
LIMS1-210ENST00000449684 DDAH1O94760 285 aa17.99■□□□□ 0.47
LIMS1-210ENST00000449684 CXCL17Q6UXB2 119 aa17.99■□□□□ 0.47
LIMS1-210ENST00000449684 SH3RF1Q7Z6J0 888 aa17.99■□□□□ 0.47
LIMS1-210ENST00000449684 OR6J1Q8NGC5 347 aa17.99■□□□□ 0.47
LIMS1-210ENST00000449684 SCFD2Q8WU76 684 aa17.99■□□□□ 0.47
LIMS1-210ENST00000449684 PIBF1Q8WXW3 757 aa17.99■□□□□ 0.47
LIMS1-210ENST00000449684 BADQ92934 168 aa17.99■□□□□ 0.47
LIMS1-210ENST00000449684 TOX2Q96NM4 488 aa17.99■□□□□ 0.47
LIMS1-210ENST00000449684 IWS1Q96ST2 819 aa17.99■□□□□ 0.47
LIMS1-210ENST00000449684 RIOX1Q9H6W3 641 aa17.99■□□□□ 0.47
LIMS1-210ENST00000449684 LCTP09848 1927 aa17.99■□□□□ 0.47
LIMS1-210ENST00000449684 RANBP2P49792 3224 aaKnown RBP17.99■□□□□ 0.47
LIMS1-210ENST00000449684 PNMA6FA0A0J9YX94 578 aa17.98■□□□□ 0.47
LIMS1-210ENST00000449684 TRIM43BA6NCK2 446 aa17.98■□□□□ 0.47
LIMS1-210ENST00000449684 ARVCFO00192 962 aa17.98■□□□□ 0.47
LIMS1-210ENST00000449684 NKRFO15226 690 aaKnown RBP eCLIP17.98■□□□□ 0.47
LIMS1-210ENST00000449684 TXNP10599 105 aaKnown RBP17.98■□□□□ 0.47
LIMS1-210ENST00000449684 EDNRBP24530 442 aa17.98■□□□□ 0.47
LIMS1-210ENST00000449684 GNAQP50148 359 aa17.98■□□□□ 0.47
LIMS1-210ENST00000449684 CPT1AP50416 773 aa17.98■□□□□ 0.47
LIMS1-210ENST00000449684 NKX3-2P78367 333 aa17.98■□□□□ 0.47
LIMS1-210ENST00000449684 TTLL4Q14679 1199 aa17.98■□□□□ 0.47
LIMS1-210ENST00000449684 STXBP2Q15833 593 aa17.98■□□□□ 0.47
LIMS1-210ENST00000449684 SYNE3Q6ZMZ3 975 aa17.98■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms