RNA–Protein interactions for RNA: ENST00000449530.2

LSP1P3-201, Transcript of LSP1 pseudogene 3, humanhuman

BASIC

Gene LSP1P3, Length 208 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSP1P3-201ENST00000449530 CYTH3O43739 400 aa13.85□□□□□ -0.19
LSP1P3-201ENST00000449530 PLEKHA8P1O95397 391 aa13.85□□□□□ -0.19
LSP1P3-201ENST00000449530 KIF5BP33176 963 aa13.85□□□□□ -0.19
LSP1P3-201ENST00000449530 HSPA4P34932 840 aa13.85□□□□□ -0.19
LSP1P3-201ENST00000449530 LIFRP42702 1097 aa13.85□□□□□ -0.19
LSP1P3-201ENST00000449530 TSGA10IPQ3SY00 556 aa13.85□□□□□ -0.19
LSP1P3-201ENST00000449530 MICU3Q86XE3 530 aa13.85□□□□□ -0.19
LSP1P3-201ENST00000449530 TMTC2Q8N394 836 aa13.85□□□□□ -0.19
LSP1P3-201ENST00000449530 JAKMIP1Q96N16 626 aaKnown RBP13.85□□□□□ -0.19
LSP1P3-201ENST00000449530 SENP6Q9GZR1 1112 aaPredicted RBP13.85□□□□□ -0.19
LSP1P3-201ENST00000449530 RIOX1Q9H6W3 641 aa13.85□□□□□ -0.19
LSP1P3-201ENST00000449530 MRPL11Q9Y3B7 192 aaKnown RBP13.85□□□□□ -0.19
LSP1P3-201ENST00000449530 SLC12A7Q9Y666 1083 aa13.85□□□□□ -0.19
LSP1P3-201ENST00000449530 CPA1P15085 419 aa13.84□□□□□ -0.19
LSP1P3-201ENST00000449530 ATN1P54259 1190 aaPredicted RBP13.84□□□□□ -0.19
LSP1P3-201ENST00000449530 LRRC26Q2I0M4 334 aa13.84□□□□□ -0.19
LSP1P3-201ENST00000449530 DHX32Q7L7V1 743 aaKnown RBP13.84□□□□□ -0.19
LSP1P3-201ENST00000449530 RNF180Q86T96 592 aa13.84□□□□□ -0.19
LSP1P3-201ENST00000449530 SGMS1Q86VZ5 419 aa13.84□□□□□ -0.19
LSP1P3-201ENST00000449530 TBC1D5Q92609 795 aa13.84□□□□□ -0.19
LSP1P3-201ENST00000449530 KCNB2Q92953 911 aa13.84□□□□□ -0.19
LSP1P3-201ENST00000449530 MAP3K14Q99558 947 aa13.84□□□□□ -0.19
LSP1P3-201ENST00000449530 PCDHA1Q9Y5I3 950 aa13.84□□□□□ -0.19
LSP1P3-201ENST00000449530 SNX14Q9Y5W7 946 aa13.84□□□□□ -0.19
LSP1P3-201ENST00000449530 NR2E3Q9Y5X4 410 aa13.84□□□□□ -0.19
LSP1P3-201ENST00000449530 C11orf97A0A1B0GVM6 126 aaPredicted RBP13.83□□□□□ -0.2
LSP1P3-201ENST00000449530 MYADML2A6NDP7 307 aa13.83□□□□□ -0.2
LSP1P3-201ENST00000449530 OPLAHO14841 1288 aa13.83□□□□□ -0.2
LSP1P3-201ENST00000449530 ADAMTS4O75173 837 aa13.83□□□□□ -0.2
LSP1P3-201ENST00000449530 DUSP11O75319 330 aaKnown RBP13.83□□□□□ -0.2
LSP1P3-201ENST00000449530 CALM1P0DP23 149 aa13.83□□□□□ -0.2
LSP1P3-201ENST00000449530 CALM2P0DP24 149 aa13.83□□□□□ -0.2
LSP1P3-201ENST00000449530 CALM3P0DP25 149 aa13.83□□□□□ -0.2
LSP1P3-201ENST00000449530 ADCYAP1R1P41586 468 aa13.83□□□□□ -0.2
LSP1P3-201ENST00000449530 EXOSC10Q01780 885 aaKnown RBP13.83□□□□□ -0.2
LSP1P3-201ENST00000449530 PDE4DQ08499 809 aa13.83□□□□□ -0.2
LSP1P3-201ENST00000449530 NOL8Q76FK4 1167 aaKnown RBP13.83□□□□□ -0.2
LSP1P3-201ENST00000449530 MCF2L2Q86YR7 1114 aa13.83□□□□□ -0.2
LSP1P3-201ENST00000449530 CMTR1Q8N1G2 835 aaKnown RBP13.83□□□□□ -0.2
LSP1P3-201ENST00000449530 RGS22Q8NE09 1264 aa13.83□□□□□ -0.2
LSP1P3-201ENST00000449530 SYTL5Q8TDW5 730 aaPredicted RBP13.83□□□□□ -0.2
LSP1P3-201ENST00000449530 MORC4Q8TE76 937 aa13.83□□□□□ -0.2
LSP1P3-201ENST00000449530 FERMT2Q96AC1 680 aa13.83□□□□□ -0.2
LSP1P3-201ENST00000449530 MPHOSPH6Q99547 160 aaKnown RBP13.83□□□□□ -0.2
LSP1P3-201ENST00000449530 SPZ1Q9BXG8 430 aa13.83□□□□□ -0.2
LSP1P3-201ENST00000449530 VTA1Q9NP79 307 aa13.83□□□□□ -0.2
LSP1P3-201ENST00000449530 PDGFCQ9NRA1 345 aa13.83□□□□□ -0.2
LSP1P3-201ENST00000449530 COL20A1Q9P218 1284 aa13.83□□□□□ -0.2
LSP1P3-201ENST00000449530 KIAA1217Q5T5P2 1943 aa13.83□□□□□ -0.2
LSP1P3-201ENST00000449530 LOC102724159A0A0B4J2E5 919 aa13.82□□□□□ -0.2
LSP1P3-201ENST00000449530 PNMA6FA0A0J9YX94 578 aa13.82□□□□□ -0.2
LSP1P3-201ENST00000449530 CFBP00751 764 aa13.82□□□□□ -0.2
LSP1P3-201ENST00000449530 HMGB1P09429 215 aaKnown RBP13.82□□□□□ -0.2
LSP1P3-201ENST00000449530 C6orf222P0C671 652 aaPredicted RBP13.82□□□□□ -0.2
LSP1P3-201ENST00000449530 PTGS1P23219 599 aa13.82□□□□□ -0.2
LSP1P3-201ENST00000449530 GNAQP50148 359 aa13.82□□□□□ -0.2
LSP1P3-201ENST00000449530 FGD1P98174 961 aa13.82□□□□□ -0.2
LSP1P3-201ENST00000449530 TNFAIP2Q03169 654 aa13.82□□□□□ -0.2
LSP1P3-201ENST00000449530 PWP2Q15269 919 aaKnown RBP13.82□□□□□ -0.2
LSP1P3-201ENST00000449530 APOA5Q6Q788 366 aa13.82□□□□□ -0.2
LSP1P3-201ENST00000449530 BLOC1S2Q6QNY1 142 aa13.82□□□□□ -0.2
LSP1P3-201ENST00000449530 SYNE3Q6ZMZ3 975 aa13.82□□□□□ -0.2
LSP1P3-201ENST00000449530 DNERQ8NFT8 737 aa13.82□□□□□ -0.2
LSP1P3-201ENST00000449530 RRP36Q96EU6 259 aaKnown RBP13.82□□□□□ -0.2
LSP1P3-201ENST00000449530 LZTS2Q9BRK4 669 aa13.82□□□□□ -0.2
LSP1P3-201ENST00000449530 SEC63Q9UGP8 760 aaKnown RBP13.82□□□□□ -0.2
LSP1P3-201ENST00000449530 ZMYND8Q9ULU4 1186 aaPredicted RBP13.82□□□□□ -0.2
LSP1P3-201ENST00000449530 NAP1L2Q9ULW6 460 aaPredicted RBP13.82□□□□□ -0.2
LSP1P3-201ENST00000449530 PHF24Q9UPV7 400 aa13.82□□□□□ -0.2
LSP1P3-201ENST00000449530 KLF18A0A0U1RQI7 1052 aa13.81□□□□□ -0.2
LSP1P3-201ENST00000449530 SMPD1P17405 629 aa13.81□□□□□ -0.2
LSP1P3-201ENST00000449530 EDNRBP24530 442 aa13.81□□□□□ -0.2
LSP1P3-201ENST00000449530 IRX5P78411 483 aaPredicted RBP13.81□□□□□ -0.2
LSP1P3-201ENST00000449530 TRAF1Q13077 416 aa13.81□□□□□ -0.2
LSP1P3-201ENST00000449530 TAPT1Q6NXT6 567 aa13.81□□□□□ -0.2
LSP1P3-201ENST00000449530 TMTC3Q6ZXV5 915 aa13.81□□□□□ -0.2
LSP1P3-201ENST00000449530 TLK2Q86UE8 772 aa13.81□□□□□ -0.2
LSP1P3-201ENST00000449530 SRBD1Q8N5C6 995 aaKnown RBP13.81□□□□□ -0.2
LSP1P3-201ENST00000449530 FANCBQ8NB91 859 aa13.81□□□□□ -0.2
LSP1P3-201ENST00000449530 TAAR1Q96RJ0 339 aa13.81□□□□□ -0.2
LSP1P3-201ENST00000449530 UPF3AQ9H1J1 476 aaKnown RBP13.81□□□□□ -0.2
LSP1P3-201ENST00000449530 SPC25Q9HBM1 224 aa13.81□□□□□ -0.2
LSP1P3-201ENST00000449530 BRPF3Q9ULD4 1205 aa13.81□□□□□ -0.2
LSP1P3-201ENST00000449530 LTBP2Q14767 1821 aa13.8□□□□□ -0.2
LSP1P3-201ENST00000449530 LAMA3Q16787 3333 aa13.8□□□□□ -0.2
LSP1P3-201ENST00000449530 A0A1W2PQ45 241 aaPredicted RBP13.8□□□□□ -0.2
LSP1P3-201ENST00000449530 A0A1W2PQY0 241 aa13.8□□□□□ -0.2
LSP1P3-201ENST00000449530 hCG_1642624A0A1W2PR95 340 aa13.8□□□□□ -0.2
LSP1P3-201ENST00000449530 GOLGA8AA7E2F4 631 aa13.8□□□□□ -0.2
LSP1P3-201ENST00000449530 GOLGA8BA8MQT2 603 aa13.8□□□□□ -0.2
LSP1P3-201ENST00000449530 B4DLN1 442 aa13.8□□□□□ -0.2
LSP1P3-201ENST00000449530 ZBTB43O43298 467 aa13.8□□□□□ -0.2
LSP1P3-201ENST00000449530 SYN1P17600 705 aa13.8□□□□□ -0.2
LSP1P3-201ENST00000449530 EIF2AK2P19525 551 aaKnown RBP13.8□□□□□ -0.2
LSP1P3-201ENST00000449530 CASTP20810 708 aaKnown RBP13.8□□□□□ -0.2
LSP1P3-201ENST00000449530 RPS6KB1P23443 525 aa13.8□□□□□ -0.2
LSP1P3-201ENST00000449530 CST5P28325 142 aaPredicted RBP13.8□□□□□ -0.2
LSP1P3-201ENST00000449530 HOXA13P31271 388 aaPredicted RBP13.8□□□□□ -0.2
LSP1P3-201ENST00000449530 HSD17B4P51659 736 aa13.8□□□□□ -0.2
LSP1P3-201ENST00000449530 MRPL12P52815 198 aaKnown RBP13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms