RNA–Protein interactions for RNA: ENST00000449264.2

TNF-208, Transcript of tumor necrosis factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNF, Length 1,676 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNF-208ENST00000449264 MOV10L1Q9BXT6 1211 aaKnown RBP16.73■□□□□ 0.27
TNF-208ENST00000449264 ACAD9Q9H845 621 aa16.73■□□□□ 0.27
TNF-208ENST00000449264 SPDYE3A6NKU9 549 aa16.72■□□□□ 0.27
TNF-208ENST00000449264 BAG4O95429 457 aaKnown RBP16.72■□□□□ 0.27
TNF-208ENST00000449264 GCLCP48506 637 aaPredicted RBP16.72■□□□□ 0.27
TNF-208ENST00000449264 CLK2P49760 499 aaKnown RBP16.72■□□□□ 0.27
TNF-208ENST00000449264 CEBPZQ03701 1054 aaKnown RBP16.72■□□□□ 0.27
TNF-208ENST00000449264 INF2Q27J81 1249 aa16.72■□□□□ 0.27
TNF-208ENST00000449264 TKFCQ3LXA3 575 aa16.72■□□□□ 0.27
TNF-208ENST00000449264 WDR78Q5VTH9 848 aa16.72■□□□□ 0.27
TNF-208ENST00000449264 FCHSD1Q86WN1 690 aa16.72■□□□□ 0.27
TNF-208ENST00000449264 FTOQ9C0B1 505 aaKnown RBP eCLIP16.72■□□□□ 0.27
TNF-208ENST00000449264 ZCCHC17Q9NP64 241 aaKnown RBP16.72■□□□□ 0.27
TNF-208ENST00000449264 FIBPO43427 364 aa16.72■□□□□ 0.27
TNF-208ENST00000449264 TM4SF4P48230 202 aa16.72■□□□□ 0.27
TNF-208ENST00000449264 NBR1Q14596 966 aa16.72■□□□□ 0.27
TNF-208ENST00000449264 NONOQ15233 471 aaKnown RBP eCLIP16.72■□□□□ 0.27
TNF-208ENST00000449264 Q3C1V9 767 aa16.72■□□□□ 0.27
TNF-208ENST00000449264 SLC30A10Q6XR72 485 aa16.72■□□□□ 0.27
TNF-208ENST00000449264 GBP4Q96PP9 640 aa16.72■□□□□ 0.27
TNF-208ENST00000449264 ANO3Q9BYT9 981 aa16.72■□□□□ 0.27
TNF-208ENST00000449264 NOL7Q9UMY1 257 aaKnown RBP16.72■□□□□ 0.27
TNF-208ENST00000449264 CNPY2Q9Y2B0 182 aa16.72■□□□□ 0.27
TNF-208ENST00000449264 PCNTO95613 3336 aa16.71■□□□□ 0.27
TNF-208ENST00000449264 PIK3CDO00329 1044 aa16.71■□□□□ 0.27
TNF-208ENST00000449264 ERCC3P19447 782 aa16.71■□□□□ 0.27
TNF-208ENST00000449264 KRT85P78386 507 aa16.71■□□□□ 0.27
TNF-208ENST00000449264 AP3B2Q13367 1082 aa16.71■□□□□ 0.27
TNF-208ENST00000449264 RNF207Q6ZRF8 634 aa16.71■□□□□ 0.27
TNF-208ENST00000449264 CHST13Q8NET6 341 aa16.71■□□□□ 0.27
TNF-208ENST00000449264 GPRC5AQ8NFJ5 357 aa16.71■□□□□ 0.27
TNF-208ENST00000449264 ZNF396Q96N95 335 aaPredicted RBP16.71■□□□□ 0.27
TNF-208ENST00000449264 USP28Q96RU2 1077 aa16.71■□□□□ 0.27
TNF-208ENST00000449264 TFIP11Q9UBB9 837 aaKnown RBP16.71■□□□□ 0.27
TNF-208ENST00000449264 CPA4Q9UI42 421 aa16.71■□□□□ 0.27
TNF-208ENST00000449264 PLXNB2O15031 1838 aa16.7■□□□□ 0.26
TNF-208ENST00000449264 SLC25A27O95847 323 aa16.7■□□□□ 0.26
TNF-208ENST00000449264 VEGFBP49765 207 aa16.7■□□□□ 0.26
TNF-208ENST00000449264 HSD17B4P51659 736 aa16.7■□□□□ 0.26
TNF-208ENST00000449264 RPS6P62753 249 aaKnown RBP16.7■□□□□ 0.26
TNF-208ENST00000449264 CCNA1P78396 465 aa16.7■□□□□ 0.26
TNF-208ENST00000449264 RILPL1Q5EBL4 403 aa16.7■□□□□ 0.26
TNF-208ENST00000449264 TBCKQ8TEA7 893 aa16.7■□□□□ 0.26
TNF-208ENST00000449264 R3HDMLQ9H3Y0 253 aa16.7■□□□□ 0.26
TNF-208ENST00000449264 GDPD2Q9HCC8 539 aa16.7■□□□□ 0.26
TNF-208ENST00000449264 FBXO40Q9UH90 709 aa16.7■□□□□ 0.26
TNF-208ENST00000449264 LCTP09848 1927 aa16.7■□□□□ 0.26
TNF-208ENST00000449264 COPB2P35606 906 aa16.69■□□□□ 0.26
TNF-208ENST00000449264 TOB1P50616 345 aaPredicted RBP16.69■□□□□ 0.26
TNF-208ENST00000449264 CRHR2Q13324 411 aa16.69■□□□□ 0.26
TNF-208ENST00000449264 BAATQ14032 418 aaPredicted RBP16.69■□□□□ 0.26
TNF-208ENST00000449264 FAM110CQ1W6H9 321 aa16.69■□□□□ 0.26
TNF-208ENST00000449264 CCAR1Q8IX12 1150 aaKnown RBP16.69■□□□□ 0.26
TNF-208ENST00000449264 ANKRD35Q8N283 1001 aa16.69■□□□□ 0.26
TNF-208ENST00000449264 ADGRA2Q96PE1 1338 aa16.69■□□□□ 0.26
TNF-208ENST00000449264 PORCNQ9H237 461 aa16.69■□□□□ 0.26
TNF-208ENST00000449264 ZFYVE28Q9HCC9 887 aa16.69■□□□□ 0.26
TNF-208ENST00000449264 A1CFQ9NQ94 594 aaKnown RBP16.69■□□□□ 0.26
TNF-208ENST00000449264 COL20A1Q9P218 1284 aa16.69■□□□□ 0.26
TNF-208ENST00000449264 MORF4L1Q9UBU8 362 aa16.69■□□□□ 0.26
TNF-208ENST00000449264 WNT7AO00755 349 aa16.69■□□□□ 0.26
TNF-208ENST00000449264 FOSP01100 380 aaPredicted RBP16.69■□□□□ 0.26
TNF-208ENST00000449264 TTC38Q5R3I4 469 aa16.69■□□□□ 0.26
TNF-208ENST00000449264 SYTL5Q8TDW5 730 aaPredicted RBP16.69■□□□□ 0.26
TNF-208ENST00000449264 EFCC1Q9HA90 598 aa16.69■□□□□ 0.26
TNF-208ENST00000449264 PCDHB6Q9Y5E3 794 aa16.69■□□□□ 0.26
TNF-208ENST00000449264 CLIC4Q9Y696 253 aa16.69■□□□□ 0.26
TNF-208ENST00000449264 ZNFX1Q9P2E3 1918 aaKnown RBP16.68■□□□□ 0.26
TNF-208ENST00000449264 ECM2O94769 699 aaPredicted RBP16.68■□□□□ 0.26
TNF-208ENST00000449264 UBXN2AP68543 259 aa16.68■□□□□ 0.26
TNF-208ENST00000449264 GHRHRQ02643 423 aa16.68■□□□□ 0.26
TNF-208ENST00000449264 LETM2Q2VYF4 491 aa16.68■□□□□ 0.26
TNF-208ENST00000449264 MCTP2Q6DN12 878 aa16.68■□□□□ 0.26
TNF-208ENST00000449264 NEK8Q86SG6 692 aa16.68■□□□□ 0.26
TNF-208ENST00000449264 TEX2Q8IWB9 1127 aa16.68■□□□□ 0.26
TNF-208ENST00000449264 MROH8Q9H579 483 aa16.68■□□□□ 0.26
TNF-208ENST00000449264 CYP39A1Q9NYL5 469 aa16.68■□□□□ 0.26
TNF-208ENST00000449264 CFAP45Q9UL16 551 aa16.68■□□□□ 0.26
TNF-208ENST00000449264 THSD7BQ9C0I4 1608 aa16.68■□□□□ 0.26
TNF-208ENST00000449264 PFASO15067 1338 aa16.67■□□□□ 0.26
TNF-208ENST00000449264 TLR2O60603 784 aa16.67■□□□□ 0.26
TNF-208ENST00000449264 TRAPPC10P48553 1259 aa16.67■□□□□ 0.26
TNF-208ENST00000449264 SF3A1Q15459 793 aaKnown RBP16.67■□□□□ 0.26
TNF-208ENST00000449264 ZNF174Q15697 407 aa16.67■□□□□ 0.26
TNF-208ENST00000449264 ANO1Q5XXA6 986 aa16.67■□□□□ 0.26
TNF-208ENST00000449264 SHCBP1Q8NEM2 672 aa16.67■□□□□ 0.26
TNF-208ENST00000449264 PURBQ96QR8 312 aaKnown RBP16.67■□□□□ 0.26
TNF-208ENST00000449264 EHMT1Q9H9B1 1298 aa16.67■□□□□ 0.26
TNF-208ENST00000449264 CA12O43570 354 aa16.66■□□□□ 0.26
TNF-208ENST00000449264 CCNT1O60563 726 aaKnown RBP16.66■□□□□ 0.26
TNF-208ENST00000449264 ALDH1A1P00352 501 aa16.66■□□□□ 0.26
TNF-208ENST00000449264 BCRP11274 1271 aa16.66■□□□□ 0.26
TNF-208ENST00000449264 MCM7P33993 719 aa16.66■□□□□ 0.26
TNF-208ENST00000449264 STK38Q15208 465 aa16.66■□□□□ 0.26
TNF-208ENST00000449264 ATL3Q6DD88 541 aa16.66■□□□□ 0.26
TNF-208ENST00000449264 CLEC17AQ6ZS10 378 aa16.66■□□□□ 0.26
TNF-208ENST00000449264 REM2Q8IYK8 340 aaPredicted RBP16.66■□□□□ 0.26
TNF-208ENST00000449264 SAMD3Q8N6K7 520 aa16.66■□□□□ 0.26
TNF-208ENST00000449264 SPATA32Q96LK8 384 aa16.66■□□□□ 0.26
TNF-208ENST00000449264 MMP19Q99542 508 aa16.66■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms