RNA–Protein interactions for RNA: ENST00000448984.1

TRIM49C-201, Transcript of tripartite motif containing 49C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM49C, Length 2,163 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49C-201ENST00000448984 PAPD7Q5XG87 772 aaKnown RBP8.29□□□□□ -1.08
TRIM49C-201ENST00000448984 PPP1R3FQ6ZSY5 799 aaPredicted RBP8.29□□□□□ -1.08
TRIM49C-201ENST00000448984 CNGA4Q8IV77 575 aa8.29□□□□□ -1.08
TRIM49C-201ENST00000448984 GSPT2Q8IYD1 628 aaKnown RBP8.29□□□□□ -1.08
TRIM49C-201ENST00000448984 GBP7Q8N8V2 638 aaPredicted RBP8.29□□□□□ -1.08
TRIM49C-201ENST00000448984 ACRBPQ8NEB7 543 aa8.29□□□□□ -1.08
TRIM49C-201ENST00000448984 C17orf50Q8WW18 174 aa8.29□□□□□ -1.08
TRIM49C-201ENST00000448984 FTOQ9C0B1 505 aaKnown RBP eCLIP8.29□□□□□ -1.08
TRIM49C-201ENST00000448984 NDST4Q9H3R1 872 aa8.29□□□□□ -1.08
TRIM49C-201ENST00000448984 PIH1D3Q9NQM4 214 aaKnown RBP8.29□□□□□ -1.08
TRIM49C-201ENST00000448984 SUN2Q9UH99 717 aa8.29□□□□□ -1.08
TRIM49C-201ENST00000448984 DACH1Q9UI36 760 aa8.29□□□□□ -1.08
TRIM49C-201ENST00000448984 BTAF1O14981 1849 aa8.29□□□□□ -1.08
TRIM49C-201ENST00000448984 PALLDQ8WX93 1383 aa8.28□□□□□ -1.08
TRIM49C-201ENST00000448984 LOC102724428A0A0B4J2F2 783 aa8.28□□□□□ -1.08
TRIM49C-201ENST00000448984 GOLGA6L10A0A0M3HER8 536 aa8.28□□□□□ -1.08
TRIM49C-201ENST00000448984 E7EWF7 191 aa8.28□□□□□ -1.08
TRIM49C-201ENST00000448984 MFAP3LO75121 409 aa8.28□□□□□ -1.08
TRIM49C-201ENST00000448984 IDH1O75874 414 aaKnown RBP8.28□□□□□ -1.08
TRIM49C-201ENST00000448984 KIF4AO95239 1232 aa8.28□□□□□ -1.08
TRIM49C-201ENST00000448984 TFRCP02786 760 aaKnown RBP8.28□□□□□ -1.08
TRIM49C-201ENST00000448984 SIK1P57059 783 aa8.28□□□□□ -1.08
TRIM49C-201ENST00000448984 GUCY1A3Q02108 690 aa8.28□□□□□ -1.08
TRIM49C-201ENST00000448984 LMNB2Q03252 620 aa8.28□□□□□ -1.08
TRIM49C-201ENST00000448984 USP4Q13107 963 aa8.28□□□□□ -1.08
TRIM49C-201ENST00000448984 TRIM28Q13263 835 aaKnown RBP8.28□□□□□ -1.08
TRIM49C-201ENST00000448984 STK38Q15208 465 aa8.28□□□□□ -1.08
TRIM49C-201ENST00000448984 HIBCHQ6NVY1 386 aaPredicted RBP8.28□□□□□ -1.08
TRIM49C-201ENST00000448984 C3orf67Q6ZVT6 689 aa8.28□□□□□ -1.08
TRIM49C-201ENST00000448984 LCA5Q86VQ0 697 aa8.28□□□□□ -1.08
TRIM49C-201ENST00000448984 PPFIBP1Q86W92 1011 aa8.28□□□□□ -1.08
TRIM49C-201ENST00000448984 TMTC1Q8IUR5 882 aa8.28□□□□□ -1.08
TRIM49C-201ENST00000448984 MMGT1Q8N4V1 131 aa8.28□□□□□ -1.08
TRIM49C-201ENST00000448984 CCDC63Q8NA47 563 aa8.28□□□□□ -1.08
TRIM49C-201ENST00000448984 LINC00301Q8NCQ3 95 aa8.28□□□□□ -1.08
TRIM49C-201ENST00000448984 LZICQ8WZA0 190 aa8.28□□□□□ -1.08
TRIM49C-201ENST00000448984 CCT6BQ92526 530 aa8.28□□□□□ -1.08
TRIM49C-201ENST00000448984 TRAPPC9Q96Q05 1148 aa8.28□□□□□ -1.08
TRIM49C-201ENST00000448984 POLR3EQ9NVU0 708 aa8.28□□□□□ -1.08
TRIM49C-201ENST00000448984 SAR1BQ9Y6B6 198 aa8.28□□□□□ -1.08
TRIM49C-201ENST00000448984 COL4A1P02462 1669 aa8.28□□□□□ -1.08
TRIM49C-201ENST00000448984 THSD7AQ9UPZ6 1657 aa8.28□□□□□ -1.08
TRIM49C-201ENST00000448984 A0A1B0GTH6 734 aa8.28□□□□□ -1.08
TRIM49C-201ENST00000448984 PPIP5K2O43314 1243 aa8.28□□□□□ -1.08
TRIM49C-201ENST00000448984 ATP6V1G1O75348 118 aa8.28□□□□□ -1.08
TRIM49C-201ENST00000448984 PSMC4P43686 418 aa8.28□□□□□ -1.08
TRIM49C-201ENST00000448984 GNAQP50148 359 aa8.28□□□□□ -1.08
TRIM49C-201ENST00000448984 MXRA7P84157 204 aa8.28□□□□□ -1.08
TRIM49C-201ENST00000448984 SPRED3Q2MJR0 410 aa8.28□□□□□ -1.08
TRIM49C-201ENST00000448984 PPP1R15BQ5SWA1 713 aa8.28□□□□□ -1.08
TRIM49C-201ENST00000448984 NUGGCQ68CJ6 796 aa8.28□□□□□ -1.08
TRIM49C-201ENST00000448984 OTUD7BQ6GQQ9 843 aa8.28□□□□□ -1.08
TRIM49C-201ENST00000448984 ZNF572Q7Z3I7 529 aaPredicted RBP8.28□□□□□ -1.08
TRIM49C-201ENST00000448984 TMTC2Q8N394 836 aa8.28□□□□□ -1.08
TRIM49C-201ENST00000448984 GDAP1L1Q96MZ0 367 aa8.28□□□□□ -1.08
TRIM49C-201ENST00000448984 ZIM3Q96PE6 472 aa8.28□□□□□ -1.08
TRIM49C-201ENST00000448984 MMS19Q96T76 1030 aa8.28□□□□□ -1.08
TRIM49C-201ENST00000448984 GPR108Q9NPR9 543 aa8.28□□□□□ -1.08
TRIM49C-201ENST00000448984 GJB4Q9NTQ9 266 aa8.28□□□□□ -1.08
TRIM49C-201ENST00000448984 THRAP3Q9Y2W1 955 aaKnown RBP8.28□□□□□ -1.08
TRIM49C-201ENST00000448984 SPEF2Q9C093 1822 aa8.28□□□□□ -1.08
TRIM49C-201ENST00000448984 ITIH6Q6UXX5 1313 aa8.28□□□□□ -1.08
TRIM49C-201ENST00000448984 ANO9A1A5B4 782 aa8.27□□□□□ -1.09
TRIM49C-201ENST00000448984 GMNCA6NCL1 334 aa8.27□□□□□ -1.09
TRIM49C-201ENST00000448984 N4BP3O15049 544 aa8.27□□□□□ -1.09
TRIM49C-201ENST00000448984 DIAPH2O60879 1101 aa8.27□□□□□ -1.09
TRIM49C-201ENST00000448984 CTDNEP1O95476 244 aa8.27□□□□□ -1.09
TRIM49C-201ENST00000448984 PAEPP09466 180 aa8.27□□□□□ -1.09
TRIM49C-201ENST00000448984 DESP17661 470 aa8.27□□□□□ -1.09
TRIM49C-201ENST00000448984 CMA1P23946 247 aa8.27□□□□□ -1.09
TRIM49C-201ENST00000448984 ABL2P42684 1182 aa8.27□□□□□ -1.09
TRIM49C-201ENST00000448984 ZNF268Q14587 947 aaPredicted RBP8.27□□□□□ -1.09
TRIM49C-201ENST00000448984 PPP1R7Q15435 360 aa8.27□□□□□ -1.09
TRIM49C-201ENST00000448984 APBB1IPQ7Z5R6 666 aaPredicted RBP8.27□□□□□ -1.09
TRIM49C-201ENST00000448984 SESTD1Q86VW0 696 aa8.27□□□□□ -1.09
TRIM49C-201ENST00000448984 KIAA0825Q8IV33 1275 aa8.27□□□□□ -1.09
TRIM49C-201ENST00000448984 FAM114A1Q8IWE2 563 aa8.27□□□□□ -1.09
TRIM49C-201ENST00000448984 LMNTD2Q8IXW0 634 aa8.27□□□□□ -1.09
TRIM49C-201ENST00000448984 MREGQ8N565 214 aa8.27□□□□□ -1.09
TRIM49C-201ENST00000448984 VGLL2Q8N8G2 317 aa8.27□□□□□ -1.09
TRIM49C-201ENST00000448984 AGAP11Q8TF27 550 aa8.27□□□□□ -1.09
TRIM49C-201ENST00000448984 SEC16BQ96JE7 1060 aa8.27□□□□□ -1.09
TRIM49C-201ENST00000448984 ATP6V1G3Q96LB4 118 aa8.27□□□□□ -1.09
TRIM49C-201ENST00000448984 CCDC87Q9NVE4 849 aa8.27□□□□□ -1.09
TRIM49C-201ENST00000448984 WWC3Q9ULE0 1092 aa8.27□□□□□ -1.09
TRIM49C-201ENST00000448984 TMCO1Q9UM00 188 aa8.27□□□□□ -1.09
TRIM49C-201ENST00000448984 MYH7P12883 1935 aa8.27□□□□□ -1.09
TRIM49C-201ENST00000448984 BCORQ6W2J9 1755 aa8.27□□□□□ -1.09
TRIM49C-201ENST00000448984 SBF2Q86WG5 1849 aa8.27□□□□□ -1.09
TRIM49C-201ENST00000448984 MYO5AQ9Y4I1 1855 aaKnown RBP8.27□□□□□ -1.09
TRIM49C-201ENST00000448984 FGAP02671 866 aa8.27□□□□□ -1.09
TRIM49C-201ENST00000448984 PFKFB1P16118 471 aa8.27□□□□□ -1.09
TRIM49C-201ENST00000448984 RXRAP19793 462 aa8.27□□□□□ -1.09
TRIM49C-201ENST00000448984 PDE6BP35913 854 aa8.27□□□□□ -1.09
TRIM49C-201ENST00000448984 SEC24CP53992 1094 aa8.27□□□□□ -1.09
TRIM49C-201ENST00000448984 NR1I3Q14994 352 aa8.27□□□□□ -1.09
TRIM49C-201ENST00000448984 SLC9C2Q5TAH2 1124 aa8.27□□□□□ -1.09
TRIM49C-201ENST00000448984 CCDC102BQ68D86 513 aa8.27□□□□□ -1.09
TRIM49C-201ENST00000448984 ZNF662Q6ZS27 426 aa8.27□□□□□ -1.09
TRIM49C-201ENST00000448984 CACNA2D4Q7Z3S7 1137 aa8.27□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms