RNA–Protein interactions for RNA: ENST00000448416.6

SYNPO2-204, Transcript of synaptopodin 2, humanhuman

TSL 2 BASIC

Gene SYNPO2, Length 4,298 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2-204ENST00000448416 TRADDQ15628 312 aa10.41□□□□□ -0.74
SYNPO2-204ENST00000448416 ZC3H12AQ5D1E8 599 aaKnown RBP10.41□□□□□ -0.74
SYNPO2-204ENST00000448416 TBC1D10CQ8IV04 446 aa10.41□□□□□ -0.74
SYNPO2-204ENST00000448416 ANKRD13CQ8N6S4 541 aa10.41□□□□□ -0.74
SYNPO2-204ENST00000448416 PTPRUQ92729 1446 aa10.4□□□□□ -0.74
SYNPO2-204ENST00000448416 RNMTO43148 476 aaKnown RBP10.4□□□□□ -0.74
SYNPO2-204ENST00000448416 FESP07332 822 aa10.4□□□□□ -0.74
SYNPO2-204ENST00000448416 PLEKP08567 350 aaPredicted RBP10.4□□□□□ -0.74
SYNPO2-204ENST00000448416 KLK7P49862 253 aa10.4□□□□□ -0.74
SYNPO2-204ENST00000448416 PDIA6Q15084 440 aa10.4□□□□□ -0.74
SYNPO2-204ENST00000448416 TYW1BQ6NUM6 668 aa10.4□□□□□ -0.74
SYNPO2-204ENST00000448416 TRIM47Q96LD4 638 aa10.4□□□□□ -0.74
SYNPO2-204ENST00000448416 FAM167BQ9BTA0 163 aa10.4□□□□□ -0.74
SYNPO2-204ENST00000448416 EXOC1Q9NV70 894 aa10.4□□□□□ -0.74
SYNPO2-204ENST00000448416 CNOT8Q9UFF9 292 aaKnown RBP10.4□□□□□ -0.74
SYNPO2-204ENST00000448416 SWAP70Q9UH65 585 aa10.4□□□□□ -0.74
SYNPO2-204ENST00000448416 IQSEC3Q9UPP2 1182 aaPredicted RBP10.4□□□□□ -0.74
SYNPO2-204ENST00000448416 PDS5AQ29RF7 1337 aaKnown RBP10.4□□□□□ -0.74
SYNPO2-204ENST00000448416 ATP5J2-PTCD1G3V325 749 aa10.4□□□□□ -0.74
SYNPO2-204ENST00000448416 AKR1B10O60218 316 aa10.4□□□□□ -0.74
SYNPO2-204ENST00000448416 PTCD1O75127 700 aaKnown RBP10.4□□□□□ -0.74
SYNPO2-204ENST00000448416 DRD4P21917 467 aa10.4□□□□□ -0.74
SYNPO2-204ENST00000448416 HSD17B3P37058 310 aa10.4□□□□□ -0.74
SYNPO2-204ENST00000448416 C1orf141Q5JVX7 400 aa10.4□□□□□ -0.74
SYNPO2-204ENST00000448416 RETREG2Q8NC44 543 aa10.4□□□□□ -0.74
SYNPO2-204ENST00000448416 IGDCC4Q8TDY8 1250 aa10.4□□□□□ -0.74
SYNPO2-204ENST00000448416 L3MBTL3Q96JM7 780 aaPredicted RBP10.4□□□□□ -0.74
SYNPO2-204ENST00000448416 TLR10Q9BXR5 811 aa10.4□□□□□ -0.74
SYNPO2-204ENST00000448416 RMND1Q9NWS8 449 aa10.4□□□□□ -0.74
SYNPO2-204ENST00000448416 ROBO2Q9HCK4 1378 aa10.4□□□□□ -0.74
SYNPO2-204ENST00000448416 CFAP73A6NFT4 308 aa10.4□□□□□ -0.75
SYNPO2-204ENST00000448416 IFIT3O14879 490 aaKnown RBP10.4□□□□□ -0.75
SYNPO2-204ENST00000448416 GTPBP6O43824 516 aaPredicted RBP10.4□□□□□ -0.75
SYNPO2-204ENST00000448416 ORC4O43929 436 aa10.4□□□□□ -0.75
SYNPO2-204ENST00000448416 SRGNP10124 158 aa10.4□□□□□ -0.75
SYNPO2-204ENST00000448416 GNPTABQ3T906 1256 aa10.4□□□□□ -0.75
SYNPO2-204ENST00000448416 ANKRD13DQ6ZTN6 518 aa10.4□□□□□ -0.75
SYNPO2-204ENST00000448416 ATG9AQ7Z3C6 839 aa10.4□□□□□ -0.75
SYNPO2-204ENST00000448416 CNKSR2Q8WXI2 1034 aa10.4□□□□□ -0.75
SYNPO2-204ENST00000448416 CHMP6Q96FZ7 201 aa10.4□□□□□ -0.75
SYNPO2-204ENST00000448416 NDST4Q9H3R1 872 aa10.4□□□□□ -0.75
SYNPO2-204ENST00000448416 GSTA1P08263 222 aa10.39□□□□□ -0.75
SYNPO2-204ENST00000448416 PAPOLAP51003 745 aaKnown RBP10.39□□□□□ -0.75
SYNPO2-204ENST00000448416 RBM5P52756 815 aaKnown RBP eCLIP10.39□□□□□ -0.75
SYNPO2-204ENST00000448416 RNASE9P60153 205 aaKnown RBP10.39□□□□□ -0.75
SYNPO2-204ENST00000448416 BLMHQ13867 455 aa10.39□□□□□ -0.75
SYNPO2-204ENST00000448416 FAM133BQ5BKY9 247 aaKnown RBP10.39□□□□□ -0.75
SYNPO2-204ENST00000448416 CCDC155Q8N6L0 562 aa10.39□□□□□ -0.75
SYNPO2-204ENST00000448416 FERMT2Q96AC1 680 aa10.39□□□□□ -0.75
SYNPO2-204ENST00000448416 LRRC45Q96CN5 670 aa10.39□□□□□ -0.75
SYNPO2-204ENST00000448416 BORCS6Q96GS4 357 aa10.39□□□□□ -0.75
SYNPO2-204ENST00000448416 TSC22D3Q99576 134 aa10.39□□□□□ -0.75
SYNPO2-204ENST00000448416 LY9Q9HBG7 655 aa10.39□□□□□ -0.75
SYNPO2-204ENST00000448416 GPR108Q9NPR9 543 aa10.39□□□□□ -0.75
SYNPO2-204ENST00000448416 SLC5A4Q9NY91 659 aa10.39□□□□□ -0.75
SYNPO2-204ENST00000448416 RNF14Q9UBS8 474 aa10.39□□□□□ -0.75
SYNPO2-204ENST00000448416 DIP2CQ9Y2E4 1556 aa10.39□□□□□ -0.75
SYNPO2-204ENST00000448416 FAM205CA6NFA0 338 aa10.39□□□□□ -0.75
SYNPO2-204ENST00000448416 LINGO3P0C6S8 592 aa10.39□□□□□ -0.75
SYNPO2-204ENST00000448416 MAGEA1P43355 309 aa10.39□□□□□ -0.75
SYNPO2-204ENST00000448416 MAGOHP61326 146 aaKnown RBP10.39□□□□□ -0.75
SYNPO2-204ENST00000448416 RPUSD2Q8IZ73 545 aaKnown RBP10.39□□□□□ -0.75
SYNPO2-204ENST00000448416 CMTR1Q8N1G2 835 aaKnown RBP10.39□□□□□ -0.75
SYNPO2-204ENST00000448416 MAGOHBQ96A72 148 aaKnown RBP10.39□□□□□ -0.75
SYNPO2-204ENST00000448416 TUBGCP2Q9BSJ2 902 aa10.39□□□□□ -0.75
SYNPO2-204ENST00000448416 TTYH3Q9C0H2 523 aa10.39□□□□□ -0.75
SYNPO2-204ENST00000448416 EIF4E1BA6NMX2 242 aaKnown RBP10.39□□□□□ -0.75
SYNPO2-204ENST00000448416 F8W031 263 aaPredicted RBP10.39□□□□□ -0.75
SYNPO2-204ENST00000448416 LIN7AO14910 233 aaPredicted RBP10.39□□□□□ -0.75
SYNPO2-204ENST00000448416 BUB1O43683 1085 aa10.39□□□□□ -0.75
SYNPO2-204ENST00000448416 RPN1P04843 607 aaKnown RBP10.39□□□□□ -0.75
SYNPO2-204ENST00000448416 PAEPP09466 180 aa10.39□□□□□ -0.75
SYNPO2-204ENST00000448416 IL15P40933 162 aaPredicted RBP10.39□□□□□ -0.75
SYNPO2-204ENST00000448416 ZNF844Q08AG5 666 aa10.39□□□□□ -0.75
SYNPO2-204ENST00000448416 SLC5A9Q2M3M2 681 aa10.39□□□□□ -0.75
SYNPO2-204ENST00000448416 C2CD5Q86YS7 1000 aa10.39□□□□□ -0.75
SYNPO2-204ENST00000448416 UBLCP1Q8WVY7 318 aaPredicted RBP10.39□□□□□ -0.75
SYNPO2-204ENST00000448416 PAPOLBQ9NRJ5 636 aaKnown RBP10.39□□□□□ -0.75
SYNPO2-204ENST00000448416 SMIM24O75264 130 aa10.38□□□□□ -0.75
SYNPO2-204ENST00000448416 LUC7L3O95232 432 aaKnown RBP10.38□□□□□ -0.75
SYNPO2-204ENST00000448416 DEXIO95424 95 aa10.38□□□□□ -0.75
SYNPO2-204ENST00000448416 KIF11P52732 1056 aa10.38□□□□□ -0.75
SYNPO2-204ENST00000448416 SGMS1Q86VZ5 419 aa10.38□□□□□ -0.75
SYNPO2-204ENST00000448416 KLHL7Q8IXQ5 586 aa10.38□□□□□ -0.75
SYNPO2-204ENST00000448416 ZNF526Q8TF50 670 aaPredicted RBP10.38□□□□□ -0.75
SYNPO2-204ENST00000448416 EEF2KMTQ96G04 330 aa10.38□□□□□ -0.75
SYNPO2-204ENST00000448416 ZFATQ9P243 1243 aa10.38□□□□□ -0.75
SYNPO2-204ENST00000448416 TSKSQ9UJT2 592 aa10.38□□□□□ -0.75
SYNPO2-204ENST00000448416 BCL9LQ86UU0 1499 aa10.38□□□□□ -0.75
SYNPO2-204ENST00000448416 TECPR2O15040 1411 aa10.38□□□□□ -0.75
SYNPO2-204ENST00000448416 CTNND1O60716 968 aaKnown RBP10.38□□□□□ -0.75
SYNPO2-204ENST00000448416 NPM1P06748 294 aaKnown RBP eCLIP10.38□□□□□ -0.75
SYNPO2-204ENST00000448416 FERP16591 822 aa10.38□□□□□ -0.75
SYNPO2-204ENST00000448416 CCND1P24385 295 aa10.38□□□□□ -0.75
SYNPO2-204ENST00000448416 CTDSPL2Q05D32 466 aa10.38□□□□□ -0.75
SYNPO2-204ENST00000448416 ZNF268Q14587 947 aaPredicted RBP10.38□□□□□ -0.75
SYNPO2-204ENST00000448416 AGBL2Q5U5Z8 902 aa10.38□□□□□ -0.75
SYNPO2-204ENST00000448416 ARMC3Q5W041 872 aa10.38□□□□□ -0.75
SYNPO2-204ENST00000448416 NOX5Q96PH1 765 aa10.38□□□□□ -0.75
SYNPO2-204ENST00000448416 PCDHGC5Q9Y5F6 944 aa10.38□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms