RNA–Protein interactions for RNA: ENST00000448223.6

SMC6-207, Transcript of structural maintenance of chromosomes 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC6, Length 5,233 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-207ENST00000448223 UBL4BQ8N7F7 174 aa10.08□□□□□ -0.8
SMC6-207ENST00000448223 LINC00301Q8NCQ3 95 aa10.08□□□□□ -0.8
SMC6-207ENST00000448223 P3H4Q92791 437 aa10.08□□□□□ -0.8
SMC6-207ENST00000448223 LLPHQ9BRT6 129 aaKnown RBP10.08□□□□□ -0.8
SMC6-207ENST00000448223 ZNF532Q9HCE3 1301 aa10.08□□□□□ -0.8
SMC6-207ENST00000448223 ANGEL1Q9UNK9 670 aaKnown RBP10.08□□□□□ -0.8
SMC6-207ENST00000448223 MON2Q7Z3U7 1717 aa10.08□□□□□ -0.8
SMC6-207ENST00000448223 ZBBXA8MT70 800 aa10.08□□□□□ -0.8
SMC6-207ENST00000448223 FOXN1O15353 648 aa10.08□□□□□ -0.8
SMC6-207ENST00000448223 SART1O43290 800 aaKnown RBP10.08□□□□□ -0.8
SMC6-207ENST00000448223 ITIH3Q06033 890 aa10.08□□□□□ -0.8
SMC6-207ENST00000448223 RTN1Q16799 776 aa10.08□□□□□ -0.8
SMC6-207ENST00000448223 KMT5BQ4FZB7 885 aa10.08□□□□□ -0.8
SMC6-207ENST00000448223 BRAPQ7Z569 592 aa10.08□□□□□ -0.8
SMC6-207ENST00000448223 CATIPQ7Z7H3 387 aa10.08□□□□□ -0.8
SMC6-207ENST00000448223 CCDC13Q8IYE1 715 aa10.08□□□□□ -0.8
SMC6-207ENST00000448223 LRRC8CQ8TDW0 803 aa10.08□□□□□ -0.8
SMC6-207ENST00000448223 ZBTB10Q96DT7 871 aa10.08□□□□□ -0.8
SMC6-207ENST00000448223 CCDC51Q96ER9 411 aa10.08□□□□□ -0.8
SMC6-207ENST00000448223 IL17RAQ96F46 866 aa10.08□□□□□ -0.8
SMC6-207ENST00000448223 PPP1R13BQ96KQ4 1090 aa10.08□□□□□ -0.8
SMC6-207ENST00000448223 IRS4O14654 1257 aaPredicted RBP10.08□□□□□ -0.8
SMC6-207ENST00000448223 CYP27B1O15528 508 aa10.08□□□□□ -0.8
SMC6-207ENST00000448223 NLRP12P59046 1061 aa10.08□□□□□ -0.8
SMC6-207ENST00000448223 NNTQ13423 1086 aa10.08□□□□□ -0.8
SMC6-207ENST00000448223 TUBB6Q9BUF5 446 aa10.08□□□□□ -0.8
SMC6-207ENST00000448223 ZCCHC17Q9NP64 241 aaKnown RBP10.08□□□□□ -0.8
SMC6-207ENST00000448223 RHBDL2Q9NX52 303 aa10.08□□□□□ -0.8
SMC6-207ENST00000448223 TECPR2O15040 1411 aa10.07□□□□□ -0.8
SMC6-207ENST00000448223 SNUPNO95149 360 aaKnown RBP10.07□□□□□ -0.8
SMC6-207ENST00000448223 RAP1GDS1P52306 607 aa10.07□□□□□ -0.8
SMC6-207ENST00000448223 EPHB4P54760 987 aa10.07□□□□□ -0.8
SMC6-207ENST00000448223 PSMC1P62191 440 aaKnown RBP10.07□□□□□ -0.8
SMC6-207ENST00000448223 TNIP1Q15025 636 aa10.07□□□□□ -0.8
SMC6-207ENST00000448223 APPBP2Q92624 585 aa10.07□□□□□ -0.8
SMC6-207ENST00000448223 GNL3Q9BVP2 549 aaKnown RBP eCLIP10.07□□□□□ -0.8
SMC6-207ENST00000448223 RNF41Q9H4P4 317 aaPredicted RBP10.07□□□□□ -0.8
SMC6-207ENST00000448223 SERTAD1Q9UHV2 236 aa10.07□□□□□ -0.8
SMC6-207ENST00000448223 HYOU1Q9Y4L1 999 aa10.07□□□□□ -0.8
SMC6-207ENST00000448223 PHLPP2Q6ZVD8 1323 aa10.07□□□□□ -0.8
SMC6-207ENST00000448223 EIF4E1BA6NMX2 242 aaKnown RBP10.07□□□□□ -0.8
SMC6-207ENST00000448223 CTDNEP1O95476 244 aa10.07□□□□□ -0.8
SMC6-207ENST00000448223 ZMYM1Q5SVZ6 1142 aa10.07□□□□□ -0.8
SMC6-207ENST00000448223 CCDC125Q86Z20 511 aa10.07□□□□□ -0.8
SMC6-207ENST00000448223 CCDC105Q8IYK2 499 aa10.07□□□□□ -0.8
SMC6-207ENST00000448223 NOC4LQ9BVI4 516 aaKnown RBP10.07□□□□□ -0.8
SMC6-207ENST00000448223 GIMAP4Q9NUV9 329 aa10.07□□□□□ -0.8
SMC6-207ENST00000448223 ARIH1Q9Y4X5 557 aaPredicted RBP10.07□□□□□ -0.8
SMC6-207ENST00000448223 CD2APQ9Y5K6 639 aa10.07□□□□□ -0.8
SMC6-207ENST00000448223 PTPRUQ92729 1446 aa10.07□□□□□ -0.8
SMC6-207ENST00000448223 SLC8A3P57103 927 aa10.07□□□□□ -0.8
SMC6-207ENST00000448223 MRPS9P82933 396 aaKnown RBP10.07□□□□□ -0.8
SMC6-207ENST00000448223 NR5A1Q13285 461 aa10.07□□□□□ -0.8
SMC6-207ENST00000448223 RAPGEF1Q13905 1077 aa10.07□□□□□ -0.8
SMC6-207ENST00000448223 CRYMQ14894 314 aa10.07□□□□□ -0.8
SMC6-207ENST00000448223 CTAGE3PQ8IX95 158 aa10.07□□□□□ -0.8
SMC6-207ENST00000448223 MLKLQ8NB16 471 aa10.07□□□□□ -0.8
SMC6-207ENST00000448223 SDCCAG3Q96C92 435 aa10.07□□□□□ -0.8
SMC6-207ENST00000448223 CNOT10Q9H9A5 744 aaKnown RBP10.07□□□□□ -0.8
SMC6-207ENST00000448223 VWA3AA6NCI4 1184 aa10.07□□□□□ -0.8
SMC6-207ENST00000448223 TRIM75PA6NK02 468 aa10.07□□□□□ -0.8
SMC6-207ENST00000448223 STXBP3O00186 592 aa10.07□□□□□ -0.8
SMC6-207ENST00000448223 TBCAO75347 108 aaKnown RBP10.07□□□□□ -0.8
SMC6-207ENST00000448223 TCP1P17987 556 aaKnown RBP10.07□□□□□ -0.8
SMC6-207ENST00000448223 NR1D1P20393 614 aa10.07□□□□□ -0.8
SMC6-207ENST00000448223 CYP7A1P22680 504 aa10.07□□□□□ -0.8
SMC6-207ENST00000448223 CDC25BP30305 580 aa10.07□□□□□ -0.8
SMC6-207ENST00000448223 MSH2P43246 934 aa10.07□□□□□ -0.8
SMC6-207ENST00000448223 PHKA1P46020 1223 aa10.07□□□□□ -0.8
SMC6-207ENST00000448223 ARHGAP4P98171 946 aa10.07□□□□□ -0.8
SMC6-207ENST00000448223 IL9RQ01113 521 aa10.07□□□□□ -0.8
SMC6-207ENST00000448223 DPF2Q92785 391 aa10.07□□□□□ -0.8
SMC6-207ENST00000448223 DSCC1Q9BVC3 393 aa10.07□□□□□ -0.8
SMC6-207ENST00000448223 BLZF1Q9H2G9 400 aa10.07□□□□□ -0.8
SMC6-207ENST00000448223 SPATA31D1Q6ZQQ2 1576 aa10.06□□□□□ -0.8
SMC6-207ENST00000448223 PALM3A6NDB9 673 aaPredicted RBP10.06□□□□□ -0.8
SMC6-207ENST00000448223 KIF28PB7ZC32 967 aa10.06□□□□□ -0.8
SMC6-207ENST00000448223 CTIFO43310 598 aaKnown RBP10.06□□□□□ -0.8
SMC6-207ENST00000448223 PRKAB2O43741 272 aa10.06□□□□□ -0.8
SMC6-207ENST00000448223 SNX16P57768 344 aa10.06□□□□□ -0.8
SMC6-207ENST00000448223 IQCB1Q15051 598 aa10.06□□□□□ -0.8
SMC6-207ENST00000448223 RILPL1Q5EBL4 403 aa10.06□□□□□ -0.8
SMC6-207ENST00000448223 VAT1LQ9HCJ6 419 aa10.06□□□□□ -0.8
SMC6-207ENST00000448223 VPS54Q9P1Q0 977 aa10.06□□□□□ -0.8
SMC6-207ENST00000448223 ZNF609O15014 1411 aa10.06□□□□□ -0.8
SMC6-207ENST00000448223 KCNA4P22459 653 aa10.06□□□□□ -0.8
SMC6-207ENST00000448223 CARD10Q9BWT7 1032 aa10.06□□□□□ -0.8
SMC6-207ENST00000448223 GREM2Q9H772 168 aa10.06□□□□□ -0.8
SMC6-207ENST00000448223 SENP2Q9HC62 589 aa10.06□□□□□ -0.8
SMC6-207ENST00000448223 H0Y3Z8 333 aa10.06□□□□□ -0.8
SMC6-207ENST00000448223 CRCPO75575 148 aa10.06□□□□□ -0.8
SMC6-207ENST00000448223 EEF1B2P24534 225 aaKnown RBP10.06□□□□□ -0.8
SMC6-207ENST00000448223 CDC25AP30304 524 aa10.06□□□□□ -0.8
SMC6-207ENST00000448223 NBPF14Q5TI25 921 aa10.06□□□□□ -0.8
SMC6-207ENST00000448223 FCHSD1Q86WN1 690 aa10.06□□□□□ -0.8
SMC6-207ENST00000448223 PPP4R1Q8TF05 950 aa10.06□□□□□ -0.8
SMC6-207ENST00000448223 KCNB2Q92953 911 aa10.06□□□□□ -0.8
SMC6-207ENST00000448223 TMEM51Q9NW97 253 aa10.06□□□□□ -0.8
SMC6-207ENST00000448223 NUTM2BA6NNL0 878 aaPredicted RBP10.06□□□□□ -0.8
SMC6-207ENST00000448223 NUTM2EB1AL46 878 aaPredicted RBP10.06□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms