RNA–Protein interactions for RNA: ENST00000447784.1

LINC00408-201, long intergenic non-protein coding RNA 408, humanhuman

TSL 5 BASIC

Gene LINC00408, Length 560 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00408-201ENST00000447784 FAM184AQ8NB25 1140 aa13.36□□□□□ -0.27
LINC00408-201ENST00000447784 CHST13Q8NET6 341 aa13.36□□□□□ -0.27
LINC00408-201ENST00000447784 DEFB118Q96PH6 123 aa13.36□□□□□ -0.27
LINC00408-201ENST00000447784 TRERF1Q96PN7 1200 aa13.36□□□□□ -0.27
LINC00408-201ENST00000447784 CRISPLD2Q9H0B8 497 aa13.36□□□□□ -0.27
LINC00408-201ENST00000447784 RNF146Q9NTX7 359 aa13.36□□□□□ -0.27
LINC00408-201ENST00000447784 ORC3Q9UBD5 711 aaPredicted RBP13.36□□□□□ -0.27
LINC00408-201ENST00000447784 KIF3AQ9Y496 699 aa13.36□□□□□ -0.27
LINC00408-201ENST00000447784 CNTNAP5Q8WYK1 1306 aa13.36□□□□□ -0.27
LINC00408-201ENST00000447784 RBBP6Q7Z6E9 1792 aaKnown RBP13.35□□□□□ -0.27
LINC00408-201ENST00000447784 PTPDC1A2A3K4 754 aa13.35□□□□□ -0.27
LINC00408-201ENST00000447784 hCG_1984214I3L0E3 225 aa13.35□□□□□ -0.27
LINC00408-201ENST00000447784 IGHA2P01877 340 aa13.35□□□□□ -0.27
LINC00408-201ENST00000447784 FCER1AP12319 257 aa13.35□□□□□ -0.27
LINC00408-201ENST00000447784 SCG2P13521 617 aa13.35□□□□□ -0.27
LINC00408-201ENST00000447784 ADORA2AP29274 412 aa13.35□□□□□ -0.27
LINC00408-201ENST00000447784 ANP32AP39687 249 aaKnown RBP13.35□□□□□ -0.27
LINC00408-201ENST00000447784 HMGN5P82970 282 aaKnown RBP13.35□□□□□ -0.27
LINC00408-201ENST00000447784 TRIM32Q13049 653 aa13.35□□□□□ -0.27
LINC00408-201ENST00000447784 KCTD2Q14681 263 aa13.35□□□□□ -0.27
LINC00408-201ENST00000447784 CCL14Q16627 93 aa13.35□□□□□ -0.27
LINC00408-201ENST00000447784 PFKFB3Q16875 520 aaPredicted RBP13.35□□□□□ -0.27
LINC00408-201ENST00000447784 MFSD14CQ5VZR4 134 aa13.35□□□□□ -0.27
LINC00408-201ENST00000447784 UBE2Q1Q7Z7E8 422 aa13.35□□□□□ -0.27
LINC00408-201ENST00000447784 DPP9Q86TI2 863 aa13.35□□□□□ -0.27
LINC00408-201ENST00000447784 ZNF713Q8N859 430 aaPredicted RBP13.35□□□□□ -0.27
LINC00408-201ENST00000447784 CCDC12Q8WUD4 166 aaPredicted RBP13.35□□□□□ -0.27
LINC00408-201ENST00000447784 DDX11Q96FC9 970 aa13.35□□□□□ -0.27
LINC00408-201ENST00000447784 ACAD9Q9H845 621 aa13.35□□□□□ -0.27
LINC00408-201ENST00000447784 SLC5A4Q9NY91 659 aa13.35□□□□□ -0.27
LINC00408-201ENST00000447784 DAXXQ9UER7 740 aaPredicted RBP13.35□□□□□ -0.27
LINC00408-201ENST00000447784 ZNF536O15090 1300 aa13.35□□□□□ -0.27
LINC00408-201ENST00000447784 A0A0G2JMZ2 1700 aa13.34□□□□□ -0.27
LINC00408-201ENST00000447784 PRKAR2AP13861 404 aaKnown RBP13.34□□□□□ -0.27
LINC00408-201ENST00000447784 NAPAP54920 295 aa13.34□□□□□ -0.27
LINC00408-201ENST00000447784 CACNB2Q08289 660 aaPredicted RBP13.34□□□□□ -0.27
LINC00408-201ENST00000447784 TRIM29Q14134 588 aa13.34□□□□□ -0.27
LINC00408-201ENST00000447784 OLFML2BQ68BL8 750 aa13.34□□□□□ -0.27
LINC00408-201ENST00000447784 ANKRD35Q8N283 1001 aa13.34□□□□□ -0.27
LINC00408-201ENST00000447784 NSUN7Q8NE18 718 aaKnown RBP13.34□□□□□ -0.27
LINC00408-201ENST00000447784 NPLOC4Q8TAT6 608 aa13.34□□□□□ -0.27
LINC00408-201ENST00000447784 MMP19Q99542 508 aa13.34□□□□□ -0.27
LINC00408-201ENST00000447784 SMC3Q9UQE7 1217 aa13.34□□□□□ -0.27
LINC00408-201ENST00000447784 RIPK3Q9Y572 518 aa13.34□□□□□ -0.27
LINC00408-201ENST00000447784 STK36Q9NRP7 1315 aa13.34□□□□□ -0.27
LINC00408-201ENST00000447784 MYH8P13535 1937 aa13.33□□□□□ -0.28
LINC00408-201ENST00000447784 JAK2O60674 1132 aa13.33□□□□□ -0.28
LINC00408-201ENST00000447784 PPP1R11O60927 126 aaPredicted RBP13.33□□□□□ -0.28
LINC00408-201ENST00000447784 COBLO75128 1261 aa13.33□□□□□ -0.28
LINC00408-201ENST00000447784 CTDNEP1O95476 244 aa13.33□□□□□ -0.28
LINC00408-201ENST00000447784 TFRCP02786 760 aaKnown RBP13.33□□□□□ -0.28
LINC00408-201ENST00000447784 PRPF38BQ5VTL8 546 aaKnown RBP13.33□□□□□ -0.28
LINC00408-201ENST00000447784 PPP1R18Q6NYC8 613 aa13.33□□□□□ -0.28
LINC00408-201ENST00000447784 NSMFQ6X4W1 530 aa13.33□□□□□ -0.28
LINC00408-201ENST00000447784 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.33□□□□□ -0.28
LINC00408-201ENST00000447784 ANKLE1Q8NAG6 615 aa13.33□□□□□ -0.28
LINC00408-201ENST00000447784 CCDC148Q8NFR7 591 aa13.33□□□□□ -0.28
LINC00408-201ENST00000447784 GPKOWQ92917 476 aaPredicted RBP eCLIP13.33□□□□□ -0.28
LINC00408-201ENST00000447784 CUL5Q93034 780 aa13.33□□□□□ -0.28
LINC00408-201ENST00000447784 ALG1Q9BT22 464 aa13.33□□□□□ -0.28
LINC00408-201ENST00000447784 BARHL2Q9NY43 387 aa13.33□□□□□ -0.28
LINC00408-201ENST00000447784 FLRT1Q9NZU1 646 aa13.33□□□□□ -0.28
LINC00408-201ENST00000447784 DIS3Q9Y2L1 958 aaKnown RBP13.33□□□□□ -0.28
LINC00408-201ENST00000447784 RLFQ13129 1914 aa13.33□□□□□ -0.28
LINC00408-201ENST00000447784 MRPL12P52815 198 aaKnown RBP13.32□□□□□ -0.28
LINC00408-201ENST00000447784 NLRP5P59047 1200 aa13.32□□□□□ -0.28
LINC00408-201ENST00000447784 CUL4AQ13619 759 aa13.32□□□□□ -0.28
LINC00408-201ENST00000447784 WWC2Q6AWC2 1192 aa13.32□□□□□ -0.28
LINC00408-201ENST00000447784 MAF1Q9H063 256 aa13.32□□□□□ -0.28
LINC00408-201ENST00000447784 GLT8D2Q9H1C3 349 aa13.32□□□□□ -0.28
LINC00408-201ENST00000447784 PSTPIP2Q9H939 334 aa13.32□□□□□ -0.28
LINC00408-201ENST00000447784 C6orf50Q9HD87 102 aa13.32□□□□□ -0.28
LINC00408-201ENST00000447784 SH3GLB2Q9NR46 395 aa13.32□□□□□ -0.28
LINC00408-201ENST00000447784 OGDHLQ9ULD0 1010 aa13.32□□□□□ -0.28
LINC00408-201ENST00000447784 BRCA2P51587 3418 aa13.32□□□□□ -0.28
LINC00408-201ENST00000447784 PLXNB2O15031 1838 aa13.32□□□□□ -0.28
LINC00408-201ENST00000447784 SMCO2A6NFE2 343 aa13.31□□□□□ -0.28
LINC00408-201ENST00000447784 GCOM1H8Y6P7 765 aaPredicted RBP13.31□□□□□ -0.28
LINC00408-201ENST00000447784 MSCO60682 206 aa13.31□□□□□ -0.28
LINC00408-201ENST00000447784 FARP2O94887 1054 aaPredicted RBP13.31□□□□□ -0.28
LINC00408-201ENST00000447784 CFBP00751 764 aa13.31□□□□□ -0.28
LINC00408-201ENST00000447784 POLR2MP0CAP2 368 aa13.31□□□□□ -0.28
LINC00408-201ENST00000447784 GNA11P29992 359 aa13.31□□□□□ -0.28
LINC00408-201ENST00000447784 ADCY7P51828 1080 aa13.31□□□□□ -0.28
LINC00408-201ENST00000447784 ST3GAL1Q11201 340 aa13.31□□□□□ -0.28
LINC00408-201ENST00000447784 PKN1Q16512 942 aa13.31□□□□□ -0.28
LINC00408-201ENST00000447784 MUM1L1Q5H9M0 696 aa13.31□□□□□ -0.28
LINC00408-201ENST00000447784 RNF207Q6ZRF8 634 aa13.31□□□□□ -0.28
LINC00408-201ENST00000447784 FAM177A1Q8N128 213 aaPredicted RBP13.31□□□□□ -0.28
LINC00408-201ENST00000447784 SAMD3Q8N6K7 520 aa13.31□□□□□ -0.28
LINC00408-201ENST00000447784 RGS22Q8NE09 1264 aa13.31□□□□□ -0.28
LINC00408-201ENST00000447784 SMARCC2Q8TAQ2 1214 aa13.31□□□□□ -0.28
LINC00408-201ENST00000447784 BICD2Q8TD16 824 aa13.31□□□□□ -0.28
LINC00408-201ENST00000447784 CLEC4DQ8WXI8 215 aa13.31□□□□□ -0.28
LINC00408-201ENST00000447784 INTS4Q96HW7 963 aaKnown RBP13.31□□□□□ -0.28
LINC00408-201ENST00000447784 MAML3Q96JK9 1138 aa13.31□□□□□ -0.28
LINC00408-201ENST00000447784 VPS54Q9P1Q0 977 aa13.31□□□□□ -0.28
LINC00408-201ENST00000447784 PFASO15067 1338 aa13.31□□□□□ -0.28
LINC00408-201ENST00000447784 POTEB2H3BUK9 544 aa13.3□□□□□ -0.28
LINC00408-201ENST00000447784 STXBP3O00186 592 aa13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms