RNA–Protein interactions for RNA: ENST00000447641.5

SREBF1-207, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 3

Gene SREBF1, Length 644 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-207ENST00000447641 FAM133AQ8N9E0 248 aa16.4■□□□□ 0.22
SREBF1-207ENST00000447641 ANKLE1Q8NAG6 615 aa16.4■□□□□ 0.22
SREBF1-207ENST00000447641 MAML3Q96JK9 1138 aa16.4■□□□□ 0.22
SREBF1-207ENST00000447641 FGD4Q96M96 766 aa16.4■□□□□ 0.22
SREBF1-207ENST00000447641 UPF3BQ9BZI7 483 aaKnown RBP16.4■□□□□ 0.22
SREBF1-207ENST00000447641 CYP39A1Q9NYL5 469 aa16.4■□□□□ 0.22
SREBF1-207ENST00000447641 RBM19Q9Y4C8 960 aaKnown RBP16.4■□□□□ 0.22
SREBF1-207ENST00000447641 LCTP09848 1927 aa16.39■□□□□ 0.21
SREBF1-207ENST00000447641 PNMA6FA0A0J9YX94 578 aa16.39■□□□□ 0.21
SREBF1-207ENST00000447641 NFIBO00712 420 aa16.39■□□□□ 0.21
SREBF1-207ENST00000447641 PLEKHA8P1O95397 391 aa16.39■□□□□ 0.21
SREBF1-207ENST00000447641 GPR153Q6NV75 609 aa16.39■□□□□ 0.21
SREBF1-207ENST00000447641 TMTC3Q6ZXV5 915 aa16.39■□□□□ 0.21
SREBF1-207ENST00000447641 ZNF467Q7Z7K2 595 aaPredicted RBP16.39■□□□□ 0.21
SREBF1-207ENST00000447641 MICU3Q86XE3 530 aa16.39■□□□□ 0.21
SREBF1-207ENST00000447641 FBXO11Q86XK2 927 aa16.39■□□□□ 0.21
SREBF1-207ENST00000447641 ANKRD35Q8N283 1001 aa16.39■□□□□ 0.21
SREBF1-207ENST00000447641 DDX11Q96FC9 970 aa16.39■□□□□ 0.21
SREBF1-207ENST00000447641 PIGSQ96S52 555 aa16.39■□□□□ 0.21
SREBF1-207ENST00000447641 AMNQ9BXJ7 453 aa16.39■□□□□ 0.21
SREBF1-207ENST00000447641 ABCB11O95342 1321 aa16.39■□□□□ 0.21
SREBF1-207ENST00000447641 DHX16O60231 1041 aaKnown RBP16.38■□□□□ 0.21
SREBF1-207ENST00000447641 FGD1P98174 961 aa16.38■□□□□ 0.21
SREBF1-207ENST00000447641 CNTN2Q02246 1040 aa16.38■□□□□ 0.21
SREBF1-207ENST00000447641 CACNB2Q08289 660 aaPredicted RBP16.38■□□□□ 0.21
SREBF1-207ENST00000447641 LRIT3Q3SXY7 679 aa16.38■□□□□ 0.21
SREBF1-207ENST00000447641 MAMDC4Q6UXC1 1216 aa16.38■□□□□ 0.21
SREBF1-207ENST00000447641 RAB11FIP4Q86YS3 637 aa16.38■□□□□ 0.21
SREBF1-207ENST00000447641 CCDC144CPQ8IYA2 1237 aa16.38■□□□□ 0.21
SREBF1-207ENST00000447641 MSL3Q8N5Y2 521 aaKnown RBP16.38■□□□□ 0.21
SREBF1-207ENST00000447641 DEFB123Q8N688 67 aa16.38■□□□□ 0.21
SREBF1-207ENST00000447641 PDRG1Q9NUG6 133 aa16.38■□□□□ 0.21
SREBF1-207ENST00000447641 RBM28Q9NW13 759 aaKnown RBP16.38■□□□□ 0.21
SREBF1-207ENST00000447641 OGDHLQ9ULD0 1010 aa16.38■□□□□ 0.21
SREBF1-207ENST00000447641 RPTORQ8N122 1335 aa16.38■□□□□ 0.21
SREBF1-207ENST00000447641 OPLAHO14841 1288 aa16.37■□□□□ 0.21
SREBF1-207ENST00000447641 PDIA3P30101 505 aaKnown RBP16.37■□□□□ 0.21
SREBF1-207ENST00000447641 CDC27P30260 824 aa16.37■□□□□ 0.21
SREBF1-207ENST00000447641 RBM25P49756 843 aaKnown RBP16.37■□□□□ 0.21
SREBF1-207ENST00000447641 GHRHRQ02643 423 aa16.37■□□□□ 0.21
SREBF1-207ENST00000447641 RTN1Q16799 776 aa16.37■□□□□ 0.21
SREBF1-207ENST00000447641 USH1GQ495M9 461 aa16.37■□□□□ 0.21
SREBF1-207ENST00000447641 MFSD14CQ5VZR4 134 aa16.37■□□□□ 0.21
SREBF1-207ENST00000447641 CMTR1Q8N1G2 835 aaKnown RBP16.37■□□□□ 0.21
SREBF1-207ENST00000447641 ZNF274Q96GC6 653 aaPredicted RBP16.37■□□□□ 0.21
SREBF1-207ENST00000447641 KIF2CQ99661 725 aa16.37■□□□□ 0.21
SREBF1-207ENST00000447641 C11orf49Q9H6J7 331 aa16.37■□□□□ 0.21
SREBF1-207ENST00000447641 MTMR10Q9NXD2 777 aa16.37■□□□□ 0.21
SREBF1-207ENST00000447641 PCDHA1Q9Y5I3 950 aa16.37■□□□□ 0.21
SREBF1-207ENST00000447641 SOWAHBA6NEL2 793 aa16.36■□□□□ 0.21
SREBF1-207ENST00000447641 POTEB2H3BUK9 544 aa16.36■□□□□ 0.21
SREBF1-207ENST00000447641 PRKAR2AP13861 404 aaKnown RBP16.36■□□□□ 0.21
SREBF1-207ENST00000447641 CYP2C19P33261 490 aa16.36■□□□□ 0.21
SREBF1-207ENST00000447641 TRAF1Q13077 416 aa16.36■□□□□ 0.21
SREBF1-207ENST00000447641 BAATQ14032 418 aaPredicted RBP16.36■□□□□ 0.21
SREBF1-207ENST00000447641 TDHQ8IZJ6 230 aa16.36■□□□□ 0.21
SREBF1-207ENST00000447641 TRPV1Q8NER1 839 aa16.36■□□□□ 0.21
SREBF1-207ENST00000447641 RRP36Q96EU6 259 aaKnown RBP16.36■□□□□ 0.21
SREBF1-207ENST00000447641 TINF2Q9BSI4 451 aa16.36■□□□□ 0.21
SREBF1-207ENST00000447641 STXBP5LQ9Y2K9 1186 aa16.36■□□□□ 0.21
SREBF1-207ENST00000447641 MRPL11Q9Y3B7 192 aaKnown RBP16.36■□□□□ 0.21
SREBF1-207ENST00000447641 ASTN1O14525 1302 aa16.36■□□□□ 0.21
SREBF1-207ENST00000447641 MCM3APO60318 1980 aa16.35■□□□□ 0.21
SREBF1-207ENST00000447641 CCDC196A0A1B0GTZ2 297 aa16.35■□□□□ 0.21
SREBF1-207ENST00000447641 GOLGA8AA7E2F4 631 aa16.35■□□□□ 0.21
SREBF1-207ENST00000447641 GOLGA8BA8MQT2 603 aa16.35■□□□□ 0.21
SREBF1-207ENST00000447641 COL6A1P12109 1028 aa16.35■□□□□ 0.21
SREBF1-207ENST00000447641 CYBAP13498 195 aa16.35■□□□□ 0.21
SREBF1-207ENST00000447641 ADD1P35611 737 aaKnown RBP16.35■□□□□ 0.21
SREBF1-207ENST00000447641 NSMFQ6X4W1 530 aa16.35■□□□□ 0.21
SREBF1-207ENST00000447641 HOMER1Q86YM7 354 aa16.35■□□□□ 0.21
SREBF1-207ENST00000447641 SAMD3Q8N6K7 520 aa16.35■□□□□ 0.21
SREBF1-207ENST00000447641 IL27Q8NEV9 243 aa16.35■□□□□ 0.21
SREBF1-207ENST00000447641 MORC4Q8TE76 937 aa16.35■□□□□ 0.21
SREBF1-207ENST00000447641 TBC1D5Q92609 795 aa16.35■□□□□ 0.21
SREBF1-207ENST00000447641 C22orf23Q9BZE7 217 aa16.35■□□□□ 0.21
SREBF1-207ENST00000447641 HMX1Q9NP08 348 aaPredicted RBP16.35■□□□□ 0.21
SREBF1-207ENST00000447641 NRBP1Q9UHY1 535 aa16.35■□□□□ 0.21
SREBF1-207ENST00000447641 SYNGAP1Q96PV0 1343 aa16.35■□□□□ 0.21
SREBF1-207ENST00000447641 LOC102724159A0A0B4J2E5 919 aa16.34■□□□□ 0.21
SREBF1-207ENST00000447641 SNAI1O95863 264 aaPredicted RBP16.34■□□□□ 0.21
SREBF1-207ENST00000447641 METAP2P50579 478 aaKnown RBP eCLIP16.34■□□□□ 0.21
SREBF1-207ENST00000447641 HSD17B4P51659 736 aa16.34■□□□□ 0.21
SREBF1-207ENST00000447641 RPS6P62753 249 aaKnown RBP16.34■□□□□ 0.21
SREBF1-207ENST00000447641 PWP2Q15269 919 aaKnown RBP16.34■□□□□ 0.21
SREBF1-207ENST00000447641 NTRK3Q16288 839 aa16.34■□□□□ 0.21
SREBF1-207ENST00000447641 SLC30A10Q6XR72 485 aa16.34■□□□□ 0.21
SREBF1-207ENST00000447641 RNF207Q6ZRF8 634 aa16.34■□□□□ 0.21
SREBF1-207ENST00000447641 MCF2L2Q86YR7 1114 aa16.34■□□□□ 0.21
SREBF1-207ENST00000447641 PURBQ96QR8 312 aaKnown RBP16.34■□□□□ 0.21
SREBF1-207ENST00000447641 MAP3K20Q9NYL2 800 aaKnown RBP16.34■□□□□ 0.21
SREBF1-207ENST00000447641 CNTNAP5Q8WYK1 1306 aa16.34■□□□□ 0.21
SREBF1-207ENST00000447641 CCND3P30281 292 aaPredicted RBP16.33■□□□□ 0.2
SREBF1-207ENST00000447641 CCDC82Q8N4S0 544 aa16.33■□□□□ 0.2
SREBF1-207ENST00000447641 PTPDC1A2A3K4 754 aa16.32■□□□□ 0.2
SREBF1-207ENST00000447641 ZNF865P0CJ78 1059 aaPredicted RBP16.32■□□□□ 0.2
SREBF1-207ENST00000447641 NEK4P51957 841 aa16.32■□□□□ 0.2
SREBF1-207ENST00000447641 AK2P54819 239 aa16.32■□□□□ 0.2
SREBF1-207ENST00000447641 ANKRD1Q15327 319 aa16.32■□□□□ 0.2
SREBF1-207ENST00000447641 LRRC26Q2I0M4 334 aa16.32■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms