RNA–Protein interactions for RNA: ENST00000447376.1

SF3A1-204, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 5

Gene SF3A1, Length 418 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-204ENST00000447376 CFBP00751 764 aa18.95■□□□□ 0.62
SF3A1-204ENST00000447376 ZNF865P0CJ78 1059 aaPredicted RBP18.95■□□□□ 0.62
SF3A1-204ENST00000447376 ALDH5A1P51649 535 aaPredicted RBP18.95■□□□□ 0.62
SF3A1-204ENST00000447376 ANAPC15P60006 121 aa18.95■□□□□ 0.62
SF3A1-204ENST00000447376 PDE4DQ08499 809 aa18.95■□□□□ 0.62
SF3A1-204ENST00000447376 ANO1Q5XXA6 986 aa18.95■□□□□ 0.62
SF3A1-204ENST00000447376 APOA5Q6Q788 366 aa18.95■□□□□ 0.62
SF3A1-204ENST00000447376 NOL8Q76FK4 1167 aaKnown RBP18.95■□□□□ 0.62
SF3A1-204ENST00000447376 UPF2Q9HAU5 1272 aaKnown RBP18.95■□□□□ 0.62
SF3A1-204ENST00000447376 NR2E3Q9Y5X4 410 aa18.95■□□□□ 0.62
SF3A1-204ENST00000447376 CCDC196A0A1B0GTZ2 297 aa18.94■□□□□ 0.62
SF3A1-204ENST00000447376 RXRAP19793 462 aa18.94■□□□□ 0.62
SF3A1-204ENST00000447376 RPS6KB1P23443 525 aa18.94■□□□□ 0.62
SF3A1-204ENST00000447376 RCAN1P53805 252 aa18.94■□□□□ 0.62
SF3A1-204ENST00000447376 PPP2R5BQ15173 497 aa18.94■□□□□ 0.62
SF3A1-204ENST00000447376 UBE2Q1Q7Z7E8 422 aa18.94■□□□□ 0.62
SF3A1-204ENST00000447376 DIS3LQ8TF46 1054 aaKnown RBP18.94■□□□□ 0.62
SF3A1-204ENST00000447376 PIBF1Q8WXW3 757 aa18.94■□□□□ 0.62
SF3A1-204ENST00000447376 FGD4Q96M96 766 aa18.94■□□□□ 0.62
SF3A1-204ENST00000447376 TM6SF1Q9BZW5 370 aa18.94■□□□□ 0.62
SF3A1-204ENST00000447376 VTA1Q9NP79 307 aa18.94■□□□□ 0.62
SF3A1-204ENST00000447376 CYP46A1Q9Y6A2 500 aa18.94■□□□□ 0.62
SF3A1-204ENST00000447376 GOLGA8AA7E2F4 631 aa18.93■□□□□ 0.62
SF3A1-204ENST00000447376 GOLGA8BA8MQT2 603 aa18.93■□□□□ 0.62
SF3A1-204ENST00000447376 EVI5O60447 810 aa18.93■□□□□ 0.62
SF3A1-204ENST00000447376 RTN1Q16799 776 aa18.93■□□□□ 0.62
SF3A1-204ENST00000447376 CCDC144BQ3MJ40 725 aa18.93■□□□□ 0.62
SF3A1-204ENST00000447376 Q6ZUG5 572 aa18.93■□□□□ 0.62
SF3A1-204ENST00000447376 RAB11FIP4Q86YS3 637 aa18.93■□□□□ 0.62
SF3A1-204ENST00000447376 NSUN6Q8TEA1 469 aaKnown RBP18.93■□□□□ 0.62
SF3A1-204ENST00000447376 FRMPD3Q5JV73 1810 aa18.93■□□□□ 0.62
SF3A1-204ENST00000447376 CYTH3O43739 400 aa18.92■□□□□ 0.62
SF3A1-204ENST00000447376 DUSP11O75319 330 aaKnown RBP18.92■□□□□ 0.62
SF3A1-204ENST00000447376 METAP2P50579 478 aaKnown RBP eCLIP18.92■□□□□ 0.621e-8■■□□□ 11.5
SF3A1-204ENST00000447376 GJC2Q5T442 439 aaPredicted RBP18.92■□□□□ 0.62
SF3A1-204ENST00000447376 PRPF38BQ5VTL8 546 aaKnown RBP18.92■□□□□ 0.62
SF3A1-204ENST00000447376 TMTC3Q6ZXV5 915 aa18.92■□□□□ 0.62
SF3A1-204ENST00000447376 BRF1Q92994 677 aa18.92■□□□□ 0.62
SF3A1-204ENST00000447376 CUL5Q93034 780 aa18.92■□□□□ 0.62
SF3A1-204ENST00000447376 GCOM1H8Y6P7 765 aaPredicted RBP18.91■□□□□ 0.62
SF3A1-204ENST00000447376 PLEKHA8P1O95397 391 aa18.91■□□□□ 0.62
SF3A1-204ENST00000447376 SEC24BO95487 1268 aa18.91■□□□□ 0.62
SF3A1-204ENST00000447376 POLR2MP0CAP2 368 aa18.91■□□□□ 0.62
SF3A1-204ENST00000447376 CPA1P15085 419 aa18.91■□□□□ 0.62
SF3A1-204ENST00000447376 TNFAIP2Q03169 654 aa18.91■□□□□ 0.62
SF3A1-204ENST00000447376 LRRC41Q15345 812 aa18.91■□□□□ 0.62
SF3A1-204ENST00000447376 ARHGEF16Q5VV41 709 aa18.91■□□□□ 0.62
SF3A1-204ENST00000447376 RUFY3Q7L099 469 aa18.91■□□□□ 0.62
SF3A1-204ENST00000447376 EEPD1Q7L9B9 569 aa18.91■□□□□ 0.62
SF3A1-204ENST00000447376 FBXO16Q8IX29 292 aaPredicted RBP18.91■□□□□ 0.62
SF3A1-204ENST00000447376 CCDC82Q8N4S0 544 aa18.91■□□□□ 0.62
SF3A1-204ENST00000447376 RMDN3Q96TC7 470 aa18.91■□□□□ 0.62
SF3A1-204ENST00000447376 SENP6Q9GZR1 1112 aaPredicted RBP18.91■□□□□ 0.62
SF3A1-204ENST00000447376 AP5M1Q9H0R1 490 aa18.91■□□□□ 0.62
SF3A1-204ENST00000447376 ZSWIM6Q9HCJ5 1215 aa18.91■□□□□ 0.62
SF3A1-204ENST00000447376 COL9A3Q14050 684 aaPredicted RBP18.9■□□□□ 0.62
SF3A1-204ENST00000447376 IQSEC1Q6DN90 963 aa18.9■□□□□ 0.62
SF3A1-204ENST00000447376 SRBD1Q8N5C6 995 aaKnown RBP18.9■□□□□ 0.62
SF3A1-204ENST00000447376 SYTL5Q8TDW5 730 aaPredicted RBP18.9■□□□□ 0.62
SF3A1-204ENST00000447376 MORC4Q8TE76 937 aa18.9■□□□□ 0.62
SF3A1-204ENST00000447376 PURBQ96QR8 312 aaKnown RBP18.9■□□□□ 0.62
SF3A1-204ENST00000447376 IWS1Q96ST2 819 aa18.9■□□□□ 0.62
SF3A1-204ENST00000447376 BRPF3Q9ULD4 1205 aa18.9■□□□□ 0.62
SF3A1-204ENST00000447376 SMCHD1A6NHR9 2005 aa18.9■□□□□ 0.62
SF3A1-204ENST00000447376 PPP1R11O60927 126 aaPredicted RBP18.89■□□□□ 0.61
SF3A1-204ENST00000447376 PGK1P00558 417 aa18.89■□□□□ 0.61
SF3A1-204ENST00000447376 C6orf222P0C671 652 aaPredicted RBP18.89■□□□□ 0.61
SF3A1-204ENST00000447376 HSD17B4P51659 736 aa18.89■□□□□ 0.61
SF3A1-204ENST00000447376 APOBRQ0VD83 1088 aa18.89■□□□□ 0.61
SF3A1-204ENST00000447376 STXBP2Q15833 593 aa18.89■□□□□ 0.61
SF3A1-204ENST00000447376 CMTR1Q8N1G2 835 aaKnown RBP18.89■□□□□ 0.61
SF3A1-204ENST00000447376 FBXL16Q8N461 479 aa18.89■□□□□ 0.61
SF3A1-204ENST00000447376 PCSK9Q8NBP7 692 aaKnown RBP18.89■□□□□ 0.61
SF3A1-204ENST00000447376 SYNRGQ9UMZ2 1314 aa18.89■□□□□ 0.61
SF3A1-204ENST00000447376 MCM3APO60318 1980 aa18.88■□□□□ 0.61
SF3A1-204ENST00000447376 ZEB2O60315 1214 aa18.88■□□□□ 0.61
SF3A1-204ENST00000447376 MNX1P50219 401 aaPredicted RBP18.88■□□□□ 0.61
SF3A1-204ENST00000447376 AKAP17AQ02040 695 aaKnown RBP18.88■□□□□ 0.61
SF3A1-204ENST00000447376 BRDTQ58F21 947 aaPredicted RBP18.88■□□□□ 0.61
SF3A1-204ENST00000447376 SMARCC2Q8TAQ2 1214 aa18.88■□□□□ 0.61
SF3A1-204ENST00000447376 TBC1D5Q92609 795 aa18.88■□□□□ 0.61
SF3A1-204ENST00000447376 TAAR1Q96RJ0 339 aa18.88■□□□□ 0.61
SF3A1-204ENST00000447376 TSEN34Q9BSV6 310 aaKnown RBP18.88■□□□□ 0.61
SF3A1-204ENST00000447376 ASTN1O14525 1302 aa18.88■□□□□ 0.61
SF3A1-204ENST00000447376 TNRC18O15417 2968 aaPredicted RBP18.87■□□□□ 0.61
SF3A1-204ENST00000447376 MOXD2PA6NHM9 499 aa18.87■□□□□ 0.61
SF3A1-204ENST00000447376 hCG_1984214I3L0E3 225 aa18.87■□□□□ 0.61
SF3A1-204ENST00000447376 NKRFO15226 690 aaKnown RBP eCLIP18.87■□□□□ 0.61
SF3A1-204ENST00000447376 COL6A1P12109 1028 aa18.87■□□□□ 0.61
SF3A1-204ENST00000447376 EIF2AK2P19525 551 aaKnown RBP18.87■□□□□ 0.61
SF3A1-204ENST00000447376 ADCYAP1R1P41586 468 aa18.87■□□□□ 0.61
SF3A1-204ENST00000447376 GHRHRQ02643 423 aa18.87■□□□□ 0.61
SF3A1-204ENST00000447376 SLC35G1Q2M3R5 365 aa18.87■□□□□ 0.61
SF3A1-204ENST00000447376 HEATR3Q7Z4Q2 680 aa18.87■□□□□ 0.61
SF3A1-204ENST00000447376 TLK2Q86UE8 772 aa18.87■□□□□ 0.61
SF3A1-204ENST00000447376 ZNF713Q8N859 430 aaPredicted RBP18.87■□□□□ 0.61
SF3A1-204ENST00000447376 SCFD2Q8WU76 684 aa18.87■□□□□ 0.61
SF3A1-204ENST00000447376 LENG1Q96BZ8 264 aaPredicted RBP18.87■□□□□ 0.61
SF3A1-204ENST00000447376 WDR11Q9BZH6 1224 aa18.87■□□□□ 0.61
SF3A1-204ENST00000447376 KATNBL1Q9H079 304 aa18.87■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms