RNA–Protein interactions for RNA: ENST00000447360.6

LRRC28-203, Transcript of leucine rich repeat containing 28, humanhuman

TSL 1 (best) BASIC

Gene LRRC28, Length 1,235 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-203ENST00000447360 DUSP28Q4G0W2 176 aa8.48□□□□□ -1.05
LRRC28-203ENST00000447360 PTCRAQ6ISU1 281 aaPredicted RBP8.48□□□□□ -1.05
LRRC28-203ENST00000447360 NFRKBQ6P4R8 1299 aa8.48□□□□□ -1.05
LRRC28-203ENST00000447360 CTR9Q6PD62 1173 aa8.48□□□□□ -1.05
LRRC28-203ENST00000447360 SPRED2Q7Z698 418 aa8.48□□□□□ -1.05
LRRC28-203ENST00000447360 AACSQ86V21 672 aa8.48□□□□□ -1.05
LRRC28-203ENST00000447360 RPAP2Q8IXW5 612 aaPredicted RBP8.48□□□□□ -1.05
LRRC28-203ENST00000447360 GDPD5Q8WTR4 605 aa8.48□□□□□ -1.05
LRRC28-203ENST00000447360 MKL1Q969V6 931 aa8.48□□□□□ -1.05
LRRC28-203ENST00000447360 MFSD14AQ96MC6 490 aa8.48□□□□□ -1.05
LRRC28-203ENST00000447360 SUGCTQ9HAC7 445 aa8.48□□□□□ -1.05
LRRC28-203ENST00000447360 VTA1Q9NP79 307 aa8.48□□□□□ -1.05
LRRC28-203ENST00000447360 A1CFQ9NQ94 594 aaKnown RBP8.48□□□□□ -1.05
LRRC28-203ENST00000447360 GBF1Q92538 1859 aa8.48□□□□□ -1.05
LRRC28-203ENST00000447360 C5orf42Q9H799 3197 aa8.48□□□□□ -1.05
LRRC28-203ENST00000447360 COL11A1P12107 1806 aaPredicted RBP8.47□□□□□ -1.05
LRRC28-203ENST00000447360 CACNA1AO00555 2505 aa8.47□□□□□ -1.05
LRRC28-203ENST00000447360 DMDP11532 3685 aa8.47□□□□□ -1.05
LRRC28-203ENST00000447360 LCHNA4D1U4 455 aa8.47□□□□□ -1.05
LRRC28-203ENST00000447360 GOLIM4O00461 696 aa8.47□□□□□ -1.05
LRRC28-203ENST00000447360 ST18O60284 1047 aa8.47□□□□□ -1.05
LRRC28-203ENST00000447360 IL9P15248 144 aa8.47□□□□□ -1.05
LRRC28-203ENST00000447360 PTGS1P23219 599 aa8.47□□□□□ -1.05
LRRC28-203ENST00000447360 ADD2P35612 726 aa8.47□□□□□ -1.05
LRRC28-203ENST00000447360 ERVK-21P61565 698 aa8.47□□□□□ -1.05
LRRC28-203ENST00000447360 FOXK2Q01167 660 aa8.47□□□□□ -1.05
LRRC28-203ENST00000447360 PTPN11Q06124 597 aaPredicted RBP8.47□□□□□ -1.05
LRRC28-203ENST00000447360 TKFCQ3LXA3 575 aa8.47□□□□□ -1.05
LRRC28-203ENST00000447360 KIAA1211Q6ZU35 1233 aa8.47□□□□□ -1.05
LRRC28-203ENST00000447360 FBXO16Q8IX29 292 aaPredicted RBP8.47□□□□□ -1.05
LRRC28-203ENST00000447360 TMEM57Q8N5G2 664 aa8.47□□□□□ -1.05
LRRC28-203ENST00000447360 NEK9Q8TD19 979 aa8.47□□□□□ -1.05
LRRC28-203ENST00000447360 MORC4Q8TE76 937 aa8.47□□□□□ -1.05
LRRC28-203ENST00000447360 FRAT1Q92837 279 aaPredicted RBP8.47□□□□□ -1.05
LRRC28-203ENST00000447360 CLUAP1Q96AJ1 413 aa8.47□□□□□ -1.05
LRRC28-203ENST00000447360 TGS1Q96RS0 853 aaKnown RBP8.47□□□□□ -1.05
LRRC28-203ENST00000447360 RAD9AQ99638 391 aa8.47□□□□□ -1.05
LRRC28-203ENST00000447360 MTG1Q9BT17 334 aaPredicted RBP8.47□□□□□ -1.05
LRRC28-203ENST00000447360 ZBED2Q9BTP6 218 aa8.47□□□□□ -1.05
LRRC28-203ENST00000447360 GPHNQ9NQX3 736 aaPredicted RBP8.47□□□□□ -1.05
LRRC28-203ENST00000447360 PDGFCQ9NRA1 345 aa8.47□□□□□ -1.05
LRRC28-203ENST00000447360 HOMER2Q9NSB8 354 aa8.47□□□□□ -1.05
LRRC28-203ENST00000447360 ARPP21Q9UBL0 812 aaPredicted RBP8.47□□□□□ -1.05
LRRC28-203ENST00000447360 CLIP2Q9UDT6 1046 aa8.47□□□□□ -1.05
LRRC28-203ENST00000447360 PRKAG3Q9UGI9 489 aa8.47□□□□□ -1.05
LRRC28-203ENST00000447360 CTNNA3Q9UI47 895 aa8.47□□□□□ -1.05
LRRC28-203ENST00000447360 FAM50BQ9Y247 325 aa8.47□□□□□ -1.05
LRRC28-203ENST00000447360 ZBED9Q6R2W3 1325 aa8.47□□□□□ -1.05
LRRC28-203ENST00000447360 NAV1Q8NEY1 1877 aa8.47□□□□□ -1.05
LRRC28-203ENST00000447360 LOC102724159A0A0B4J2E5 919 aa8.46□□□□□ -1.06
LRRC28-203ENST00000447360 KPNA6O60684 536 aa8.46□□□□□ -1.06
LRRC28-203ENST00000447360 GJB5O95377 273 aa8.46□□□□□ -1.06
LRRC28-203ENST00000447360 PARNO95453 639 aaKnown RBP8.46□□□□□ -1.06
LRRC28-203ENST00000447360 BMP3P12645 472 aa8.46□□□□□ -1.06
LRRC28-203ENST00000447360 RASA1P20936 1047 aa8.46□□□□□ -1.06
LRRC28-203ENST00000447360 WDR5P61964 334 aaKnown RBP8.46□□□□□ -1.06
LRRC28-203ENST00000447360 PWP2Q15269 919 aaKnown RBP8.46□□□□□ -1.06
LRRC28-203ENST00000447360 UBE3CQ15386 1083 aa8.46□□□□□ -1.06
LRRC28-203ENST00000447360 NBPF20Q3BBV1 942 aa8.46□□□□□ -1.06
LRRC28-203ENST00000447360 BRDTQ58F21 947 aaPredicted RBP8.46□□□□□ -1.06
LRRC28-203ENST00000447360 TMEM63BQ5T3F8 832 aa8.46□□□□□ -1.06
LRRC28-203ENST00000447360 HFE2Q6ZVN8 426 aa8.46□□□□□ -1.06
LRRC28-203ENST00000447360 EEPD1Q7L9B9 569 aa8.46□□□□□ -1.06
LRRC28-203ENST00000447360 GMCL1P1Q8NEA9 526 aa8.46□□□□□ -1.06
LRRC28-203ENST00000447360 CAGE1Q8TC20 777 aa8.46□□□□□ -1.06
LRRC28-203ENST00000447360 AFAP1L1Q8TED9 768 aa8.46□□□□□ -1.06
LRRC28-203ENST00000447360 TRERF1Q96PN7 1200 aa8.46□□□□□ -1.06
LRRC28-203ENST00000447360 DNAJC2Q99543 621 aaKnown RBP8.46□□□□□ -1.06
LRRC28-203ENST00000447360 UPF3BQ9BZI7 483 aaKnown RBP8.46□□□□□ -1.06
LRRC28-203ENST00000447360 DDX24Q9GZR7 859 aaKnown RBP eCLIP8.46□□□□□ -1.06
LRRC28-203ENST00000447360 MKNK2Q9HBH9 465 aa8.46□□□□□ -1.06
LRRC28-203ENST00000447360 RNF146Q9NTX7 359 aa8.46□□□□□ -1.06
LRRC28-203ENST00000447360 CYP39A1Q9NYL5 469 aa8.46□□□□□ -1.06
LRRC28-203ENST00000447360 TNNQ9UQP3 1299 aa8.46□□□□□ -1.06
LRRC28-203ENST00000447360 SLC4A4Q9Y6R1 1079 aa8.46□□□□□ -1.06
LRRC28-203ENST00000447360 ZFHX2Q9C0A1 2572 aaPredicted RBP8.45□□□□□ -1.06
LRRC28-203ENST00000447360 IGKV6D-41A0A0C4DH26 115 aa8.45□□□□□ -1.06
LRRC28-203ENST00000447360 RBM47A0AV96 593 aaKnown RBP8.45□□□□□ -1.06
LRRC28-203ENST00000447360 LINC01553A4QN01 128 aa8.45□□□□□ -1.06
LRRC28-203ENST00000447360 C19orf67A6NJJ6 358 aa8.45□□□□□ -1.06
LRRC28-203ENST00000447360 EFCAB14O75071 495 aa8.45□□□□□ -1.06
LRRC28-203ENST00000447360 TTLL1O95922 423 aa8.45□□□□□ -1.06
LRRC28-203ENST00000447360 MYL3P08590 195 aa8.45□□□□□ -1.06
LRRC28-203ENST00000447360 STAT2P52630 851 aa8.45□□□□□ -1.06
LRRC28-203ENST00000447360 HNRNPUQ00839 825 aaKnown RBP eCLIP8.45□□□□□ -1.06
LRRC28-203ENST00000447360 ZP2Q05996 745 aa8.45□□□□□ -1.06
LRRC28-203ENST00000447360 SBK1Q52WX2 424 aa8.45□□□□□ -1.06
LRRC28-203ENST00000447360 HSP90AB4PQ58FF6 505 aa8.45□□□□□ -1.06
LRRC28-203ENST00000447360 FAM47CQ5HY64 1035 aa8.45□□□□□ -1.06
LRRC28-203ENST00000447360 CNKSR3Q6P9H4 555 aa8.45□□□□□ -1.06
LRRC28-203ENST00000447360 FAM160B2Q86V87 743 aa8.45□□□□□ -1.06
LRRC28-203ENST00000447360 CLASRPQ8N2M8 674 aaKnown RBP8.45□□□□□ -1.06
LRRC28-203ENST00000447360 CCDC155Q8N6L0 562 aa8.45□□□□□ -1.06
LRRC28-203ENST00000447360 CHURC1Q8WUH1 139 aa8.45□□□□□ -1.06
LRRC28-203ENST00000447360 WDR11Q9BZH6 1224 aa8.45□□□□□ -1.06
LRRC28-203ENST00000447360 C1orf115Q9H7X2 142 aa8.45□□□□□ -1.06
LRRC28-203ENST00000447360 ZNF287Q9HBT7 754 aa8.45□□□□□ -1.06
LRRC28-203ENST00000447360 PAG1Q9NWQ8 432 aa8.45□□□□□ -1.06
LRRC28-203ENST00000447360 MTMR4Q9NYA4 1195 aa8.45□□□□□ -1.06
LRRC28-203ENST00000447360 MTUS1Q9ULD2 1270 aa8.45□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms