RNA–Protein interactions for RNA: ENST00000447310.5

ZNF550-204, Transcript of zinc finger protein 550, humanhuman

TSL 1 (best)

Gene ZNF550, Length 4,305 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF550-204ENST00000447310 PLVAPQ9BX97 442 aa12.38□□□□□ -0.43
ZNF550-204ENST00000447310 ESYT3A0FGR9 886 aa12.38□□□□□ -0.43
ZNF550-204ENST00000447310 PLCG2P16885 1265 aa12.38□□□□□ -0.43
ZNF550-204ENST00000447310 ABCB4P21439 1286 aa12.38□□□□□ -0.43
ZNF550-204ENST00000447310 TNFAIP3P21580 790 aa12.38□□□□□ -0.43
ZNF550-204ENST00000447310 PPP1R7Q15435 360 aa12.38□□□□□ -0.43
ZNF550-204ENST00000447310 EMBQ6PCB8 327 aa12.38□□□□□ -0.43
ZNF550-204ENST00000447310 LIMA1Q9UHB6 759 aaKnown RBP12.38□□□□□ -0.43
ZNF550-204ENST00000447310 L1RE1Q9UN81 338 aa12.38□□□□□ -0.43
ZNF550-204ENST00000447310 PCDHB13Q9Y5F0 798 aa12.38□□□□□ -0.43
ZNF550-204ENST00000447310 ZRANB2O95218 330 aaKnown RBP eCLIP12.38□□□□□ -0.43
ZNF550-204ENST00000447310 TFRCP02786 760 aaKnown RBP12.38□□□□□ -0.43
ZNF550-204ENST00000447310 DPYDQ12882 1025 aa12.38□□□□□ -0.43
ZNF550-204ENST00000447310 MTMR3Q13615 1198 aa12.38□□□□□ -0.43
ZNF550-204ENST00000447310 NFRKBQ6P4R8 1299 aa12.38□□□□□ -0.43
ZNF550-204ENST00000447310 SPATS2Q86XZ4 545 aaKnown RBP12.38□□□□□ -0.43
ZNF550-204ENST00000447310 UHMK1Q8TAS1 419 aaKnown RBP12.38□□□□□ -0.43
ZNF550-204ENST00000447310 U2AF1L4Q8WU68 220 aaKnown RBP12.38□□□□□ -0.43
ZNF550-204ENST00000447310 HNRNPLLQ8WVV9 542 aaKnown RBP12.38□□□□□ -0.43
ZNF550-204ENST00000447310 LARP4BQ92615 738 aaKnown RBP12.38□□□□□ -0.43
ZNF550-204ENST00000447310 CUEDC2Q9H467 287 aa12.38□□□□□ -0.43
ZNF550-204ENST00000447310 POLD4Q9HCU8 107 aa12.38□□□□□ -0.43
ZNF550-204ENST00000447310 ATP8A2Q9NTI2 1148 aa12.38□□□□□ -0.43
ZNF550-204ENST00000447310 PSD3Q9NYI0 1048 aa12.38□□□□□ -0.43
ZNF550-204ENST00000447310 SALL1Q9NSC2 1324 aa12.37□□□□□ -0.43
ZNF550-204ENST00000447310 A0A1B0GUA9 196 aa12.37□□□□□ -0.43
ZNF550-204ENST00000447310 ANO9A1A5B4 782 aa12.37□□□□□ -0.43
ZNF550-204ENST00000447310 RFC4P35249 363 aa12.37□□□□□ -0.43
ZNF550-204ENST00000447310 APBA1Q02410 837 aa12.37□□□□□ -0.43
ZNF550-204ENST00000447310 MMS22LQ6ZRQ5 1243 aa12.37□□□□□ -0.43
ZNF550-204ENST00000447310 RSRC2Q7L4I2 434 aaKnown RBP12.37□□□□□ -0.43
ZNF550-204ENST00000447310 EPB41L3Q9Y2J2 1087 aaPredicted RBP12.37□□□□□ -0.43
ZNF550-204ENST00000447310 NR1D1P20393 614 aa12.37□□□□□ -0.43
ZNF550-204ENST00000447310 CLNS1AP54105 237 aaKnown RBP12.37□□□□□ -0.43
ZNF550-204ENST00000447310 ZRSR2Q15696 482 aaKnown RBP12.37□□□□□ -0.43
ZNF550-204ENST00000447310 ALS2CLQ60I27 953 aa12.37□□□□□ -0.43
ZNF550-204ENST00000447310 GALNT17Q6IS24 598 aa12.37□□□□□ -0.43
ZNF550-204ENST00000447310 WDR66Q8TBY9 1149 aa12.37□□□□□ -0.43
ZNF550-204ENST00000447310 RSRC1Q96IZ7 334 aaKnown RBP12.37□□□□□ -0.43
ZNF550-204ENST00000447310 NAP1L3Q99457 506 aaPredicted RBP12.37□□□□□ -0.43
ZNF550-204ENST00000447310 NYXQ9GZU5 481 aa12.37□□□□□ -0.43
ZNF550-204ENST00000447310 PCDHA12Q9UN75 941 aa12.37□□□□□ -0.43
ZNF550-204ENST00000447310 WDR17Q8IZU2 1322 aa12.37□□□□□ -0.43
ZNF550-204ENST00000447310 MYL1P05976 194 aa12.37□□□□□ -0.43
ZNF550-204ENST00000447310 POTEJP0CG39 1038 aa12.37□□□□□ -0.43
ZNF550-204ENST00000447310 CD44P16070 742 aaKnown RBP12.37□□□□□ -0.43
ZNF550-204ENST00000447310 TOB1P50616 345 aaPredicted RBP12.37□□□□□ -0.43
ZNF550-204ENST00000447310 ATP2C1P98194 919 aaPredicted RBP12.37□□□□□ -0.43
ZNF550-204ENST00000447310 ADAM9Q13443 819 aa12.37□□□□□ -0.43
ZNF550-204ENST00000447310 GKAP1Q5VSY0 366 aaPredicted RBP12.37□□□□□ -0.43
ZNF550-204ENST00000447310 HOOK3Q86VS8 718 aa12.37□□□□□ -0.43
ZNF550-204ENST00000447310 EPB41L4AQ9HCS5 686 aaPredicted RBP12.37□□□□□ -0.43
ZNF550-204ENST00000447310 ADAMTS1Q9UHI8 967 aa12.37□□□□□ -0.43
ZNF550-204ENST00000447310 NCK2O43639 380 aa12.36□□□□□ -0.43
ZNF550-204ENST00000447310 GPBP1Q86WP2 473 aa12.36□□□□□ -0.43
ZNF550-204ENST00000447310 TBCKQ8TEA7 893 aa12.36□□□□□ -0.43
ZNF550-204ENST00000447310 NGLY1Q96IV0 654 aa12.36□□□□□ -0.43
ZNF550-204ENST00000447310 AK8Q96MA6 479 aa12.36□□□□□ -0.43
ZNF550-204ENST00000447310 JPH2Q9BR39 696 aaPredicted RBP12.36□□□□□ -0.43
ZNF550-204ENST00000447310 MAGEF1Q9HAY2 307 aa12.36□□□□□ -0.43
ZNF550-204ENST00000447310 AGPAT5Q9NUQ2 364 aa12.36□□□□□ -0.43
ZNF550-204ENST00000447310 PANK4Q9NVE7 773 aa12.36□□□□□ -0.43
ZNF550-204ENST00000447310 ARMCX3Q9UH62 379 aaPredicted RBP12.36□□□□□ -0.43
ZNF550-204ENST00000447310 FRMPD2Q68DX3 1309 aaPredicted RBP12.36□□□□□ -0.43
ZNF550-204ENST00000447310 CLTCQ00610 1675 aaKnown RBP12.36□□□□□ -0.43
ZNF550-204ENST00000447310 USP17L8P0C7I0 530 aa12.36□□□□□ -0.43
ZNF550-204ENST00000447310 TNIP1Q15025 636 aa12.36□□□□□ -0.43
ZNF550-204ENST00000447310 MTUS1Q9ULD2 1270 aa12.36□□□□□ -0.43
ZNF550-204ENST00000447310 LAD1O00515 517 aa12.36□□□□□ -0.43
ZNF550-204ENST00000447310 IL6STP40189 918 aaPredicted RBP12.36□□□□□ -0.43
ZNF550-204ENST00000447310 FKBP3Q00688 224 aaKnown RBP12.36□□□□□ -0.43
ZNF550-204ENST00000447310 SUSD4Q5VX71 490 aa12.36□□□□□ -0.43
ZNF550-204ENST00000447310 DYNLL2Q96FJ2 89 aa12.36□□□□□ -0.43
ZNF550-204ENST00000447310 LRRC1Q9BTT6 524 aa12.36□□□□□ -0.43
ZNF550-204ENST00000447310 TMEM51Q9NW97 253 aa12.36□□□□□ -0.43
ZNF550-204ENST00000447310 ITSN1Q15811 1721 aa12.36□□□□□ -0.43
ZNF550-204ENST00000447310 COL15A1P39059 1388 aa12.36□□□□□ -0.43
ZNF550-204ENST00000447310 SPOPO43791 374 aa12.36□□□□□ -0.43
ZNF550-204ENST00000447310 H2AFZP0C0S5 128 aa12.36□□□□□ -0.43
ZNF550-204ENST00000447310 XRCC5P13010 732 aaKnown RBP12.36□□□□□ -0.43
ZNF550-204ENST00000447310 GJC1P36383 396 aa12.36□□□□□ -0.43
ZNF550-204ENST00000447310 CACNB1Q02641 598 aaPredicted RBP12.36□□□□□ -0.43
ZNF550-204ENST00000447310 H2AFVQ71UI9 128 aa12.36□□□□□ -0.43
ZNF550-204ENST00000447310 CCDC77Q9BR77 488 aa12.36□□□□□ -0.43
ZNF550-204ENST00000447310 CARD10Q9BWT7 1032 aa12.36□□□□□ -0.43
ZNF550-204ENST00000447310 CPVLQ9H3G5 476 aa12.36□□□□□ -0.43
ZNF550-204ENST00000447310 CTTNBP2NLQ9P2B4 639 aa12.36□□□□□ -0.43
ZNF550-204ENST00000447310 AMFRQ9UKV5 643 aa12.36□□□□□ -0.43
ZNF550-204ENST00000447310 CAPN11Q9UMQ6 739 aa12.36□□□□□ -0.43
ZNF550-204ENST00000447310 USP17L3A6NCW0 530 aa12.35□□□□□ -0.43
ZNF550-204ENST00000447310 USP17L4A6NCW7 530 aa12.35□□□□□ -0.43
ZNF550-204ENST00000447310 BUB1BO60566 1050 aaPredicted RBP12.35□□□□□ -0.43
ZNF550-204ENST00000447310 CYP2D6P10635 497 aa12.35□□□□□ -0.43
ZNF550-204ENST00000447310 ERVK-24P63145 666 aa12.35□□□□□ -0.43
ZNF550-204ENST00000447310 TRIM28Q13263 835 aaKnown RBP12.35□□□□□ -0.43
ZNF550-204ENST00000447310 TMEM132AQ24JP5 1023 aa12.35□□□□□ -0.43
ZNF550-204ENST00000447310 HAUS3Q68CZ6 603 aa12.35□□□□□ -0.43
ZNF550-204ENST00000447310 USP17L1Q7RTZ2 530 aa12.35□□□□□ -0.43
ZNF550-204ENST00000447310 FAM133AQ8N9E0 248 aa12.35□□□□□ -0.43
ZNF550-204ENST00000447310 SPATA4Q8NEY3 305 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms