RNA–Protein interactions for RNA: ENST00000447283.6

GNE-203, Transcript of glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase, humanhuman

TSL 5 BASIC

Gene GNE, Length 2,174 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNE-203ENST00000447283 TUBBP07437 444 aa12.85□□□□□ -0.35
GNE-203ENST00000447283 ARHGAP25P42331 645 aa12.85□□□□□ -0.35
GNE-203ENST00000447283 NT5C2P49902 561 aa12.85□□□□□ -0.35
GNE-203ENST00000447283 COPB1P53618 953 aaKnown RBP12.85□□□□□ -0.35
GNE-203ENST00000447283 NFIAQ12857 509 aa12.85□□□□□ -0.35
GNE-203ENST00000447283 TMTC3Q6ZXV5 915 aa12.85□□□□□ -0.35
GNE-203ENST00000447283 ACRBPQ8NEB7 543 aa12.85□□□□□ -0.35
GNE-203ENST00000447283 PNKPQ96T60 521 aa12.85□□□□□ -0.35
GNE-203ENST00000447283 MKNK2Q9HBH9 465 aa12.85□□□□□ -0.35
GNE-203ENST00000447283 ADAM21Q9UKJ8 722 aa12.85□□□□□ -0.35
GNE-203ENST00000447283 L1RE1Q9UN81 338 aa12.85□□□□□ -0.35
GNE-203ENST00000447283 DDX52Q9Y2R4 599 aaKnown RBP eCLIP12.85□□□□□ -0.35
GNE-203ENST00000447283 CNTNAP5Q8WYK1 1306 aa12.84□□□□□ -0.35
GNE-203ENST00000447283 hCG_1642624A0A1W2PR95 340 aa12.84□□□□□ -0.35
GNE-203ENST00000447283 CCT6AP40227 531 aaKnown RBP12.84□□□□□ -0.35
GNE-203ENST00000447283 CACNB3P54284 484 aa12.84□□□□□ -0.35
GNE-203ENST00000447283 IRX5P78411 483 aaPredicted RBP12.84□□□□□ -0.35
GNE-203ENST00000447283 PAK1Q13153 545 aa12.84□□□□□ -0.35
GNE-203ENST00000447283 NOM1Q5C9Z4 860 aaKnown RBP12.84□□□□□ -0.35
GNE-203ENST00000447283 TCP11X2Q5H9J9 407 aa12.84□□□□□ -0.35
GNE-203ENST00000447283 IQCA1Q86XH1 822 aa12.84□□□□□ -0.35
GNE-203ENST00000447283 ANKRD20A12PQ8NF67 263 aa12.84□□□□□ -0.35
GNE-203ENST00000447283 DYNLL2Q96FJ2 89 aa12.84□□□□□ -0.35
GNE-203ENST00000447283 ROBO3Q96MS0 1386 aa12.84□□□□□ -0.35
GNE-203ENST00000447283 GMPSP49915 693 aaPredicted RBP12.84□□□□□ -0.35
GNE-203ENST00000447283 GPR162Q16538 588 aa12.84□□□□□ -0.35
GNE-203ENST00000447283 ZNF658Q5TYW1 1059 aaPredicted RBP12.84□□□□□ -0.35
GNE-203ENST00000447283 RRAGBQ5VZM2 374 aa12.84□□□□□ -0.35
GNE-203ENST00000447283 MTRQ99707 1265 aa12.84□□□□□ -0.35
GNE-203ENST00000447283 DHX36Q9H2U1 1008 aaKnown RBP12.84□□□□□ -0.35
GNE-203ENST00000447283 MYOZ2Q9NPC6 264 aa12.84□□□□□ -0.35
GNE-203ENST00000447283 RMND1Q9NWS8 449 aa12.84□□□□□ -0.35
GNE-203ENST00000447283 TMOD2Q9NZR1 351 aa12.84□□□□□ -0.35
GNE-203ENST00000447283 CTAGE15A4D2H0 777 aa12.83□□□□□ -0.36
GNE-203ENST00000447283 RNF225M0QZC1 329 aaPredicted RBP12.83□□□□□ -0.36
GNE-203ENST00000447283 EIF3JO75822 258 aaKnown RBP12.83□□□□□ -0.36
GNE-203ENST00000447283 CTAGE8P0CG41 777 aa12.83□□□□□ -0.36
GNE-203ENST00000447283 ZNF280AP59817 542 aaPredicted RBP12.83□□□□□ -0.36
GNE-203ENST00000447283 AMPD2Q01433 879 aa12.83□□□□□ -0.36
GNE-203ENST00000447283 TCP10Q12799 353 aa12.83□□□□□ -0.36
GNE-203ENST00000447283 C16orf86Q6ZW13 317 aa12.83□□□□□ -0.36
GNE-203ENST00000447283 CTAGE6Q86UF2 777 aa12.83□□□□□ -0.36
GNE-203ENST00000447283 CTAGE4Q8IX94 777 aa12.83□□□□□ -0.36
GNE-203ENST00000447283 ZNF444Q8N0Y2 327 aaPredicted RBP12.83□□□□□ -0.36
GNE-203ENST00000447283 GBP3Q9H0R5 595 aa12.83□□□□□ -0.36
GNE-203ENST00000447283 FAM198AQ9UFP1 575 aa12.83□□□□□ -0.36
GNE-203ENST00000447283 CNOT7Q9UIV1 285 aaKnown RBP12.83□□□□□ -0.36
GNE-203ENST00000447283 ZNF541Q9H0D2 1346 aa12.83□□□□□ -0.36
GNE-203ENST00000447283 KCNJ18B7U540 433 aa12.83□□□□□ -0.36
GNE-203ENST00000447283 ENTPD3O75355 529 aa12.83□□□□□ -0.36
GNE-203ENST00000447283 HLA-DOAP06340 250 aa12.83□□□□□ -0.36
GNE-203ENST00000447283 KCNJ12Q14500 433 aa12.83□□□□□ -0.36
GNE-203ENST00000447283 ARL6IP4Q66PJ3 421 aaKnown RBP12.83□□□□□ -0.36
GNE-203ENST00000447283 ZFPM1Q8IX07 1006 aa12.83□□□□□ -0.36
GNE-203ENST00000447283 GPC2Q8N158 579 aa12.83□□□□□ -0.36
GNE-203ENST00000447283 NELFBQ8WX92 580 aa12.83□□□□□ -0.36
GNE-203ENST00000447283 STAMQ92783 540 aa12.83□□□□□ -0.36
GNE-203ENST00000447283 NUP88Q99567 741 aaPredicted RBP12.83□□□□□ -0.36
GNE-203ENST00000447283 VPS16Q9H269 839 aa12.83□□□□□ -0.36
GNE-203ENST00000447283 BLZF1Q9H2G9 400 aa12.83□□□□□ -0.36
GNE-203ENST00000447283 ABCB6Q9NP58 842 aa12.83□□□□□ -0.36
GNE-203ENST00000447283 RNF181Q9P0P0 153 aa12.83□□□□□ -0.36
GNE-203ENST00000447283 BAZ2BQ9UIF8 2168 aaKnown RBP12.82□□□□□ -0.36
GNE-203ENST00000447283 TSPY2A6NKD2 308 aa12.82□□□□□ -0.36
GNE-203ENST00000447283 H7C1D1 291 aa12.82□□□□□ -0.36
GNE-203ENST00000447283 WNT10BO00744 389 aa12.82□□□□□ -0.36
GNE-203ENST00000447283 ABL1P00519 1130 aa12.82□□□□□ -0.36
GNE-203ENST00000447283 CDC25AP30304 524 aa12.82□□□□□ -0.36
GNE-203ENST00000447283 KRT9P35527 623 aa12.82□□□□□ -0.36
GNE-203ENST00000447283 CDK8P49336 464 aa12.82□□□□□ -0.36
GNE-203ENST00000447283 SLC20A2Q08357 652 aa12.82□□□□□ -0.36
GNE-203ENST00000447283 IL17AQ16552 155 aa12.82□□□□□ -0.36
GNE-203ENST00000447283 ZSCAN26Q16670 478 aa12.82□□□□□ -0.36
GNE-203ENST00000447283 ZSCAN29Q8IWY8 852 aaPredicted RBP12.82□□□□□ -0.36
GNE-203ENST00000447283 MICALL2Q8IY33 904 aa12.82□□□□□ -0.36
GNE-203ENST00000447283 SRBD1Q8N5C6 995 aaKnown RBP12.82□□□□□ -0.36
GNE-203ENST00000447283 TSPYL1Q9H0U9 437 aa12.82□□□□□ -0.36
GNE-203ENST00000447283 PDE11AQ9HCR9 933 aa12.82□□□□□ -0.36
GNE-203ENST00000447283 TAB2Q9NYJ8 693 aa12.82□□□□□ -0.36
GNE-203ENST00000447283 ZNF70Q9UC06 446 aaPredicted RBP12.82□□□□□ -0.36
GNE-203ENST00000447283 SERPINB13Q9UIV8 391 aa12.82□□□□□ -0.36
GNE-203ENST00000447283 LAMB1P07942 1786 aa12.82□□□□□ -0.36
GNE-203ENST00000447283 SHTN1A0MZ66 631 aa12.81□□□□□ -0.36
GNE-203ENST00000447283 CLRN2A0PK11 232 aa12.81□□□□□ -0.36
GNE-203ENST00000447283 RPN1P04843 607 aaKnown RBP12.81□□□□□ -0.36
GNE-203ENST00000447283 SCG2P13521 617 aa12.81□□□□□ -0.36
GNE-203ENST00000447283 LONP1P36776 959 aaKnown RBP12.81□□□□□ -0.36
GNE-203ENST00000447283 TFAP4Q01664 338 aa12.81□□□□□ -0.36
GNE-203ENST00000447283 RAD51AP2Q09MP3 1159 aa12.81□□□□□ -0.36
GNE-203ENST00000447283 MCM6Q14566 821 aa12.81□□□□□ -0.36
GNE-203ENST00000447283 SPDYE2Q495Y8 402 aa12.81□□□□□ -0.36
GNE-203ENST00000447283 FAM47AQ5JRC9 791 aa12.81□□□□□ -0.36
GNE-203ENST00000447283 RBM26Q5T8P6 1007 aaKnown RBP12.81□□□□□ -0.36
GNE-203ENST00000447283 WDR93Q6P2C0 686 aa12.81□□□□□ -0.36
GNE-203ENST00000447283 SLC44A5Q8NCS7 719 aa12.81□□□□□ -0.36
GNE-203ENST00000447283 GOLGA5Q8TBA6 731 aa12.81□□□□□ -0.36
GNE-203ENST00000447283 ZBED3Q96IU2 234 aaPredicted RBP12.81□□□□□ -0.36
GNE-203ENST00000447283 TMEM51Q9NW97 253 aa12.81□□□□□ -0.36
GNE-203ENST00000447283 PI4KBQ9UBF8 816 aa12.81□□□□□ -0.36
GNE-203ENST00000447283 MYO6Q9UM54 1294 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms