RNA–Protein interactions for RNA: ENST00000447182.6

SDCBP-204, Transcript of syndecan binding protein, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SDCBP, Length 2,103 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-204ENST00000447182 DUSP10Q9Y6W6 482 aa21.28■■□□□ 1
SDCBP-204ENST00000447182 ZNF263O14978 683 aa21.27■■□□□ 1
SDCBP-204ENST00000447182 ASIC1P78348 528 aa21.27■■□□□ 1
SDCBP-204ENST00000447182 CNNM4Q6P4Q7 775 aa21.27■■□□□ 1
SDCBP-204ENST00000447182 ZBTB9Q96C00 473 aa21.27■■□□□ 1
SDCBP-204ENST00000447182 CCDC42Q96M95 316 aa21.27■■□□□ 1
SDCBP-204ENST00000447182 TFCP2L1Q9NZI6 479 aa21.27■■□□□ 1
SDCBP-204ENST00000447182 ZNF185O15231 689 aa21.26■□□□□ 0.99
SDCBP-204ENST00000447182 LCA5LO95447 670 aa21.26■□□□□ 0.99
SDCBP-204ENST00000447182 CYP27A1Q02318 531 aa21.26■□□□□ 0.99
SDCBP-204ENST00000447182 CENPPQ6IPU0 288 aa21.26■□□□□ 0.99
SDCBP-204ENST00000447182 CCDC70Q6NSX1 233 aa21.26■□□□□ 0.99
SDCBP-204ENST00000447182 PCMTD1Q96MG8 357 aaPredicted RBP21.26■□□□□ 0.99
SDCBP-204ENST00000447182 SELENOOQ9BVL4 669 aa21.26■□□□□ 0.99
SDCBP-204ENST00000447182 JADE2Q9NQC1 790 aa21.26■□□□□ 0.99
SDCBP-204ENST00000447182 ABCB11O95342 1321 aa21.26■□□□□ 0.99
SDCBP-204ENST00000447182 A0A0G2JS52 829 aa21.26■□□□□ 0.99
SDCBP-204ENST00000447182 USO1O60763 962 aaKnown RBP21.26■□□□□ 0.99
SDCBP-204ENST00000447182 MYBL2P10244 700 aa21.26■□□□□ 0.99
SDCBP-204ENST00000447182 ORC2Q13416 577 aaPredicted RBP21.26■□□□□ 0.99
SDCBP-204ENST00000447182 DZIP1Q86YF9 867 aaKnown RBP21.26■□□□□ 0.99
SDCBP-204ENST00000447182 CREG2Q8IUH2 290 aa21.26■□□□□ 0.99
SDCBP-204ENST00000447182 CRACR2AQ9BSW2 395 aa21.26■□□□□ 0.99
SDCBP-204ENST00000447182 SPZ1Q9BXG8 430 aa21.26■□□□□ 0.99
SDCBP-204ENST00000447182 MKNK2Q9HBH9 465 aa21.26■□□□□ 0.99
SDCBP-204ENST00000447182 THRAP3Q9Y2W1 955 aaKnown RBP21.26■□□□□ 0.99
SDCBP-204ENST00000447182 MACROD2A1Z1Q3 448 aa21.25■□□□□ 0.99
SDCBP-204ENST00000447182 USP17L3A6NCW0 530 aa21.25■□□□□ 0.99
SDCBP-204ENST00000447182 USP17L4A6NCW7 530 aa21.25■□□□□ 0.99
SDCBP-204ENST00000447182 TRIM66O15016 1216 aa21.25■□□□□ 0.99
SDCBP-204ENST00000447182 TSPY3P0CV98 308 aa21.25■□□□□ 0.99
SDCBP-204ENST00000447182 TSPY8P0CW00 308 aa21.25■□□□□ 0.99
SDCBP-204ENST00000447182 FCER1AP12319 257 aa21.25■□□□□ 0.99
SDCBP-204ENST00000447182 NONOQ15233 471 aaKnown RBP eCLIP21.25■□□□□ 0.99
SDCBP-204ENST00000447182 FOXR1Q6PIV2 292 aa21.25■□□□□ 0.99
SDCBP-204ENST00000447182 USP17L1Q7RTZ2 530 aa21.25■□□□□ 0.99
SDCBP-204ENST00000447182 AMOTL1Q8IY63 956 aa21.25■□□□□ 0.99
SDCBP-204ENST00000447182 C10orf67Q8IYJ2 551 aa21.25■□□□□ 0.99
SDCBP-204ENST00000447182 AENQ8WTP8 325 aaKnown RBP21.25■□□□□ 0.99
SDCBP-204ENST00000447182 SMARCC1Q92922 1105 aaPredicted RBP21.25■□□□□ 0.99
SDCBP-204ENST00000447182 DYNLL2Q96FJ2 89 aa21.25■□□□□ 0.99
SDCBP-204ENST00000447182 SH2D4AQ9H788 454 aa21.25■□□□□ 0.99
SDCBP-204ENST00000447182 FAM184BQ9ULE4 1060 aa21.25■□□□□ 0.99
SDCBP-204ENST00000447182 TACC1O75410 805 aa21.25■□□□□ 0.99
SDCBP-204ENST00000447182 MARCH10Q8NA82 808 aaPredicted RBP21.25■□□□□ 0.99
SDCBP-204ENST00000447182 KIAA0895Q8NCT3 520 aa21.25■□□□□ 0.99
SDCBP-204ENST00000447182 EEF2KMTQ96G04 330 aa21.25■□□□□ 0.99
SDCBP-204ENST00000447182 SEMA6BQ9H3T3 888 aa21.25■□□□□ 0.99
SDCBP-204ENST00000447182 LRWD1Q9UFC0 647 aa21.25■□□□□ 0.99
SDCBP-204ENST00000447182 SIK3Q9Y2K2 1263 aa21.25■□□□□ 0.99
SDCBP-204ENST00000447182 ZNF831Q5JPB2 1677 aa21.24■□□□□ 0.99
SDCBP-204ENST00000447182 IRS2Q9Y4H2 1338 aa21.24■□□□□ 0.99
SDCBP-204ENST00000447182 AGPSO00116 658 aa21.24■□□□□ 0.99
SDCBP-204ENST00000447182 CCNT1O60563 726 aaKnown RBP21.24■□□□□ 0.99
SDCBP-204ENST00000447182 PPFIA4O75335 1185 aa21.24■□□□□ 0.99
SDCBP-204ENST00000447182 GGCXP38435 758 aa21.24■□□□□ 0.99
SDCBP-204ENST00000447182 TMEM47Q9BQJ4 181 aa21.24■□□□□ 0.99
SDCBP-204ENST00000447182 ZMYND10O75800 440 aa21.23■□□□□ 0.99
SDCBP-204ENST00000447182 C2orf54Q08AI8 447 aa21.23■□□□□ 0.99
SDCBP-204ENST00000447182 CCDC96Q2M329 555 aa21.23■□□□□ 0.99
SDCBP-204ENST00000447182 SLC4A8Q2Y0W8 1093 aa21.23■□□□□ 0.99
SDCBP-204ENST00000447182 VWA3BQ502W6 1294 aa21.23■□□□□ 0.99
SDCBP-204ENST00000447182 NEK8Q86SG6 692 aa21.23■□□□□ 0.99
SDCBP-204ENST00000447182 MMTAG2Q9BU76 263 aaKnown RBP21.23■□□□□ 0.99
SDCBP-204ENST00000447182 IFIH1Q9BYX4 1025 aaKnown RBP21.23■□□□□ 0.99
SDCBP-204ENST00000447182 ARHGAP20Q9P2F6 1191 aa21.23■□□□□ 0.99
SDCBP-204ENST00000447182 PCDHA13Q9Y5I0 950 aa21.23■□□□□ 0.99
SDCBP-204ENST00000447182 SPATA31A1Q5TZJ5 1347 aa21.23■□□□□ 0.99
SDCBP-204ENST00000447182 SHOX2O60902 331 aaPredicted RBP21.23■□□□□ 0.99
SDCBP-204ENST00000447182 GNA11P29992 359 aa21.23■□□□□ 0.99
SDCBP-204ENST00000447182 LETM2Q2VYF4 491 aa21.23■□□□□ 0.99
SDCBP-204ENST00000447182 ZNF444Q8N0Y2 327 aaPredicted RBP21.23■□□□□ 0.99
SDCBP-204ENST00000447182 TRIM34Q9BYJ4 488 aa21.23■□□□□ 0.99
SDCBP-204ENST00000447182 C6orf50Q9HD87 102 aa21.23■□□□□ 0.99
SDCBP-204ENST00000447182 KLRF2D3W0D1 207 aa21.22■□□□□ 0.99
SDCBP-204ENST00000447182 HOXA7P31268 230 aaPredicted RBP21.22■□□□□ 0.99
SDCBP-204ENST00000447182 NAPAP54920 295 aa21.22■□□□□ 0.99
SDCBP-204ENST00000447182 KRT26Q7Z3Y9 468 aa21.22■□□□□ 0.99
SDCBP-204ENST00000447182 CCDC84Q86UT8 332 aaPredicted RBP21.22■□□□□ 0.99
SDCBP-204ENST00000447182 CALML4Q96GE6 196 aa21.22■□□□□ 0.99
SDCBP-204ENST00000447182 NDST4Q9H3R1 872 aa21.22■□□□□ 0.99
SDCBP-204ENST00000447182 CAPN6Q9Y6Q1 641 aa21.22■□□□□ 0.99
SDCBP-204ENST00000447182 PVALEFA0A1B0GWK0 134 aa21.22■□□□□ 0.99
SDCBP-204ENST00000447182 NKRFO15226 690 aaKnown RBP eCLIP21.22■□□□□ 0.993e-7■■■■□ 24.1
SDCBP-204ENST00000447182 PLEKP08567 350 aaPredicted RBP21.22■□□□□ 0.99
SDCBP-204ENST00000447182 TCP1P17987 556 aaKnown RBP21.22■□□□□ 0.99
SDCBP-204ENST00000447182 KIF11P52732 1056 aa21.22■□□□□ 0.99
SDCBP-204ENST00000447182 SH3RF3Q8TEJ3 882 aaPredicted RBP21.22■□□□□ 0.99
SDCBP-204ENST00000447182 NLRP3Q96P20 1036 aa21.22■□□□□ 0.99
SDCBP-204ENST00000447182 NYXQ9GZU5 481 aa21.22■□□□□ 0.99
SDCBP-204ENST00000447182 NAV1Q8NEY1 1877 aa21.21■□□□□ 0.99
SDCBP-204ENST00000447182 RASA1P20936 1047 aa21.21■□□□□ 0.99
SDCBP-204ENST00000447182 SMARCA1P28370 1054 aa21.21■□□□□ 0.99
SDCBP-204ENST00000447182 PPP4CP60510 307 aa21.21■□□□□ 0.99
SDCBP-204ENST00000447182 MAN2A1Q16706 1144 aa21.21■□□□□ 0.99
SDCBP-204ENST00000447182 TBC1D9BQ66K14 1250 aa21.21■□□□□ 0.99
SDCBP-204ENST00000447182 TXNRD3Q86VQ6 643 aa21.21■□□□□ 0.99
SDCBP-204ENST00000447182 C2CD5Q86YS7 1000 aa21.21■□□□□ 0.99
SDCBP-204ENST00000447182 GSPT2Q8IYD1 628 aaKnown RBP21.21■□□□□ 0.99
SDCBP-204ENST00000447182 RIN2Q8WYP3 895 aaPredicted RBP21.21■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms