RNA–Protein interactions for RNA: ENST00000447025.6

MCF2L2-203, Transcript of MCF.2 cell line derived transforming sequence-like 2, humanhuman

TSL 1 (best) BASIC

Gene MCF2L2, Length 2,394 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L2-203ENST00000447025 LONRF2Q1L5Z9 754 aa9.52□□□□□ -0.89
MCF2L2-203ENST00000447025 ACCSLQ4AC99 568 aa9.52□□□□□ -0.89
MCF2L2-203ENST00000447025 ANKRD39Q53RE8 183 aa9.52□□□□□ -0.89
MCF2L2-203ENST00000447025 WDR44Q5JSH3 913 aa9.52□□□□□ -0.89
MCF2L2-203ENST00000447025 GRAMD4Q6IC98 578 aa9.52□□□□□ -0.89
MCF2L2-203ENST00000447025 LUZP1Q86V48 1076 aa9.52□□□□□ -0.89
MCF2L2-203ENST00000447025 WDR60Q8WVS4 1066 aa9.52□□□□□ -0.89
MCF2L2-203ENST00000447025 HNRNPLLQ8WVV9 542 aaKnown RBP9.52□□□□□ -0.89
MCF2L2-203ENST00000447025 CNKSR1Q969H4 720 aa9.52□□□□□ -0.89
MCF2L2-203ENST00000447025 JAKMIP1Q96N16 626 aaKnown RBP9.52□□□□□ -0.89
MCF2L2-203ENST00000447025 NELL2Q99435 816 aa9.52□□□□□ -0.89
MCF2L2-203ENST00000447025 NUP58Q9BVL2 599 aa9.52□□□□□ -0.89
MCF2L2-203ENST00000447025 PARVBQ9HBI1 364 aa9.52□□□□□ -0.89
MCF2L2-203ENST00000447025 MOCS1Q9NZB8 636 aa9.52□□□□□ -0.89
MCF2L2-203ENST00000447025 TBX22Q9Y458 520 aa9.52□□□□□ -0.89
MCF2L2-203ENST00000447025 TRIM17Q9Y577 477 aa9.52□□□□□ -0.89
MCF2L2-203ENST00000447025 TACC3Q9Y6A5 838 aa9.52□□□□□ -0.89
MCF2L2-203ENST00000447025 ZCCHC11Q5TAX3 1644 aaKnown RBP9.52□□□□□ -0.89
MCF2L2-203ENST00000447025 PLSCR1O15162 318 aa9.51□□□□□ -0.89
MCF2L2-203ENST00000447025 MAP3K7O43318 606 aa9.51□□□□□ -0.89
MCF2L2-203ENST00000447025 KLHL41O60662 606 aa9.51□□□□□ -0.89
MCF2L2-203ENST00000447025 GSTT2P0CG29 244 aa9.51□□□□□ -0.89
MCF2L2-203ENST00000447025 GSTT2BP0CG30 244 aa9.51□□□□□ -0.89
MCF2L2-203ENST00000447025 ATF7P17544 494 aaPredicted RBP9.51□□□□□ -0.89
MCF2L2-203ENST00000447025 PRKACBP22694 351 aa9.51□□□□□ -0.89
MCF2L2-203ENST00000447025 LMNB2Q03252 620 aa9.51□□□□□ -0.89
MCF2L2-203ENST00000447025 BRD3Q15059 726 aa9.51□□□□□ -0.89
MCF2L2-203ENST00000447025 TAF1CQ15572 869 aaPredicted RBP9.51□□□□□ -0.89
MCF2L2-203ENST00000447025 PCSK7Q16549 785 aa9.51□□□□□ -0.89
MCF2L2-203ENST00000447025 CFAP70Q5T0N1 1121 aa9.51□□□□□ -0.89
MCF2L2-203ENST00000447025 TBC1D9BQ66K14 1250 aa9.51□□□□□ -0.89
MCF2L2-203ENST00000447025 SCAIQ8N9R8 606 aa9.51□□□□□ -0.89
MCF2L2-203ENST00000447025 DQX1Q8TE96 717 aaKnown RBP9.51□□□□□ -0.89
MCF2L2-203ENST00000447025 IFT81Q8WYA0 676 aa9.51□□□□□ -0.89
MCF2L2-203ENST00000447025 CHIC2Q9UKJ5 165 aa9.51□□□□□ -0.89
MCF2L2-203ENST00000447025 PTPRKQ15262 1439 aa9.51□□□□□ -0.89
MCF2L2-203ENST00000447025 FGD6Q6ZV73 1430 aa9.51□□□□□ -0.89
MCF2L2-203ENST00000447025 GNAT3A8MTJ3 354 aa9.51□□□□□ -0.89
MCF2L2-203ENST00000447025 AKR1B15C9JRZ8 316 aaPredicted RBP9.51□□□□□ -0.89
MCF2L2-203ENST00000447025 HAT1O14929 419 aa9.51□□□□□ -0.89
MCF2L2-203ENST00000447025 S100A6P06703 90 aa9.51□□□□□ -0.89
MCF2L2-203ENST00000447025 ZSCAN22P10073 491 aaPredicted RBP9.51□□□□□ -0.89
MCF2L2-203ENST00000447025 ZNF16P17020 682 aaPredicted RBP9.51□□□□□ -0.89
MCF2L2-203ENST00000447025 MXRA7P84157 204 aa9.51□□□□□ -0.89
MCF2L2-203ENST00000447025 POLA2Q14181 598 aa9.51□□□□□ -0.89
MCF2L2-203ENST00000447025 SGSM1Q2NKQ1 1148 aa9.51□□□□□ -0.89
MCF2L2-203ENST00000447025 TNNI3KQ59H18 835 aa9.51□□□□□ -0.89
MCF2L2-203ENST00000447025 SLC27A3Q5K4L6 730 aa9.51□□□□□ -0.89
MCF2L2-203ENST00000447025 SPATA1Q5VX52 437 aa9.51□□□□□ -0.89
MCF2L2-203ENST00000447025 NEK5Q6P3R8 708 aa9.51□□□□□ -0.89
MCF2L2-203ENST00000447025 C3orf62Q6ZUJ4 267 aa9.51□□□□□ -0.89
MCF2L2-203ENST00000447025 INTS8Q75QN2 995 aaKnown RBP9.51□□□□□ -0.89
MCF2L2-203ENST00000447025 HDXQ7Z353 690 aa9.51□□□□□ -0.89
MCF2L2-203ENST00000447025 ARHGAP30Q7Z6I6 1101 aaPredicted RBP9.51□□□□□ -0.89
MCF2L2-203ENST00000447025 CRACR2BQ8N4Y2 399 aaPredicted RBP9.51□□□□□ -0.89
MCF2L2-203ENST00000447025 CCHCR1Q8TD31 782 aa9.51□□□□□ -0.89
MCF2L2-203ENST00000447025 DIS3LQ8TF46 1054 aaKnown RBP9.51□□□□□ -0.89
MCF2L2-203ENST00000447025 SERHL2Q9H4I8 314 aa9.51□□□□□ -0.89
MCF2L2-203ENST00000447025 PIDD1Q9HB75 910 aa9.51□□□□□ -0.89
MCF2L2-203ENST00000447025 PIH1D1Q9NWS0 290 aaKnown RBP9.51□□□□□ -0.89
MCF2L2-203ENST00000447025 KDM5BQ9UGL1 1544 aa9.51□□□□□ -0.89
MCF2L2-203ENST00000447025 ZNF536O15090 1300 aa9.51□□□□□ -0.89
MCF2L2-203ENST00000447025 S100BP04271 92 aaPredicted RBP9.5□□□□□ -0.89
MCF2L2-203ENST00000447025 GLI1P08151 1106 aa9.5□□□□□ -0.89
MCF2L2-203ENST00000447025 SRGNP10124 158 aa9.5□□□□□ -0.89
MCF2L2-203ENST00000447025 ALAS1P13196 640 aa9.5□□□□□ -0.89
MCF2L2-203ENST00000447025 HPDP32754 393 aaPredicted RBP9.5□□□□□ -0.89
MCF2L2-203ENST00000447025 HAAOP46952 286 aa9.5□□□□□ -0.89
MCF2L2-203ENST00000447025 HSPA14Q0VDF9 509 aa9.5□□□□□ -0.89
MCF2L2-203ENST00000447025 ITPRIPQ8IWB1 547 aa9.5□□□□□ -0.89
MCF2L2-203ENST00000447025 FUKQ8N0W3 1084 aa9.5□□□□□ -0.89
MCF2L2-203ENST00000447025 SIX5Q8N196 739 aa9.5□□□□□ -0.89
MCF2L2-203ENST00000447025 AFAP1L1Q8TED9 768 aa9.5□□□□□ -0.89
MCF2L2-203ENST00000447025 NLRP3Q96P20 1036 aa9.5□□□□□ -0.89
MCF2L2-203ENST00000447025 TRAPPC9Q96Q05 1148 aa9.5□□□□□ -0.89
MCF2L2-203ENST00000447025 MTMR9Q96QG7 549 aa9.5□□□□□ -0.89
MCF2L2-203ENST00000447025 TTPALQ9BTX7 342 aa9.5□□□□□ -0.89
MCF2L2-203ENST00000447025 BEGAINQ9BUH8 593 aa9.5□□□□□ -0.89
MCF2L2-203ENST00000447025 GBP3Q9H0R5 595 aa9.5□□□□□ -0.89
MCF2L2-203ENST00000447025 VCX3AQ9NNX9 186 aa9.5□□□□□ -0.89
MCF2L2-203ENST00000447025 CHST12Q9NRB3 414 aa9.5□□□□□ -0.89
MCF2L2-203ENST00000447025 NSFL1CQ9UNZ2 370 aaKnown RBP9.5□□□□□ -0.89
MCF2L2-203ENST00000447025 COL4A3BPQ9Y5P4 624 aa9.5□□□□□ -0.89
MCF2L2-203ENST00000447025 PPP2R3BQ9Y5P8 575 aa9.5□□□□□ -0.89
MCF2L2-203ENST00000447025 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP9.5□□□□□ -0.89
MCF2L2-203ENST00000447025 CCDC169A6NNP5 214 aa9.5□□□□□ -0.89
MCF2L2-203ENST00000447025 AP3B1O00203 1094 aa9.5□□□□□ -0.89
MCF2L2-203ENST00000447025 CDC45O75419 566 aa9.5□□□□□ -0.89
MCF2L2-203ENST00000447025 OLFM2O95897 454 aa9.5□□□□□ -0.89
MCF2L2-203ENST00000447025 PLCG2P16885 1265 aa9.5□□□□□ -0.89
MCF2L2-203ENST00000447025 ADD2P35612 726 aa9.5□□□□□ -0.89
MCF2L2-203ENST00000447025 NR2C2P49116 596 aa9.5□□□□□ -0.89
MCF2L2-203ENST00000447025 USP46P62068 366 aa9.5□□□□□ -0.89
MCF2L2-203ENST00000447025 KRT83P78385 493 aa9.5□□□□□ -0.89
MCF2L2-203ENST00000447025 ZNF600Q6ZNG1 722 aa9.5□□□□□ -0.89
MCF2L2-203ENST00000447025 TOR1AIP2Q8NFQ8 470 aa9.5□□□□□ -0.89
MCF2L2-203ENST00000447025 ANKRD27Q96NW4 1050 aa9.5□□□□□ -0.89
MCF2L2-203ENST00000447025 ALG1Q9BT22 464 aa9.5□□□□□ -0.89
MCF2L2-203ENST00000447025 GBA3Q9H227 469 aa9.5□□□□□ -0.89
MCF2L2-203ENST00000447025 CCSER2Q9H7U1 834 aa9.5□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms