RNA–Protein interactions for RNA: ENST00000445889.5

ERCC3-203, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

TSL 2

Gene ERCC3, Length 2,920 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-203ENST00000445889 CALML3P27482 149 aa15.84■□□□□ 0.13
ERCC3-203ENST00000445889 KIF5BP33176 963 aa15.84■□□□□ 0.13
ERCC3-203ENST00000445889 AARSP49588 968 aaKnown RBP eCLIP15.84■□□□□ 0.13
ERCC3-203ENST00000445889 GRIK5Q16478 980 aa15.84■□□□□ 0.13
ERCC3-203ENST00000445889 MEA1Q16626 185 aa15.84■□□□□ 0.13
ERCC3-203ENST00000445889 RRAGAQ7L523 313 aa15.84■□□□□ 0.13
ERCC3-203ENST00000445889 VIPAS39Q9H9C1 493 aa15.84■□□□□ 0.13
ERCC3-203ENST00000445889 GOLGA6AQ9NYA3 693 aa15.84■□□□□ 0.13
ERCC3-203ENST00000445889 BIN2Q9UBW5 565 aaPredicted RBP15.84■□□□□ 0.13
ERCC3-203ENST00000445889 BCL9LQ86UU0 1499 aa15.84■□□□□ 0.13
ERCC3-203ENST00000445889 PARP4Q9UKK3 1724 aaKnown RBP15.84■□□□□ 0.13
ERCC3-203ENST00000445889 AKR1B10O60218 316 aa15.84■□□□□ 0.13
ERCC3-203ENST00000445889 FGRP09769 529 aa15.84■□□□□ 0.13
ERCC3-203ENST00000445889 ZBED6P86452 979 aa15.84■□□□□ 0.13
ERCC3-203ENST00000445889 USP17L2Q6R6M4 530 aa15.84■□□□□ 0.13
ERCC3-203ENST00000445889 SH2D3CQ8N5H7 860 aa15.84■□□□□ 0.13
ERCC3-203ENST00000445889 PROCA1Q8NCQ7 364 aaPredicted RBP15.84■□□□□ 0.13
ERCC3-203ENST00000445889 KIAA0895Q8NCT3 520 aa15.84■□□□□ 0.13
ERCC3-203ENST00000445889 NLRC4Q9NPP4 1024 aa15.84■□□□□ 0.13
ERCC3-203ENST00000445889 MAD2L2Q9UI95 211 aa15.84■□□□□ 0.13
ERCC3-203ENST00000445889 MYH3P11055 1940 aa15.84■□□□□ 0.13
ERCC3-203ENST00000445889 RASSF7Q02833 373 aa15.83■□□□□ 0.12
ERCC3-203ENST00000445889 ARID5AQ03989 594 aa15.83■□□□□ 0.12
ERCC3-203ENST00000445889 GFPT1Q06210 699 aaPredicted RBP15.83■□□□□ 0.12
ERCC3-203ENST00000445889 DNAAF5Q86Y56 855 aa15.83■□□□□ 0.12
ERCC3-203ENST00000445889 TSEN2Q8NCE0 465 aaKnown RBP15.83■□□□□ 0.12
ERCC3-203ENST00000445889 FAM76AQ8TAV0 307 aa15.83■□□□□ 0.12
ERCC3-203ENST00000445889 ARL8AQ96BM9 186 aa15.83■□□□□ 0.12
ERCC3-203ENST00000445889 UBA5Q9GZZ9 404 aa15.83■□□□□ 0.12
ERCC3-203ENST00000445889 TMEM260Q9NX78 707 aa15.83■□□□□ 0.12
ERCC3-203ENST00000445889 PCDHA13Q9Y5I0 950 aa15.83■□□□□ 0.12
ERCC3-203ENST00000445889 CCNE1P24864 410 aa15.83■□□□□ 0.12
ERCC3-203ENST00000445889 ATP1A2P50993 1020 aa15.83■□□□□ 0.12
ERCC3-203ENST00000445889 CORO7P57737 925 aa15.83■□□□□ 0.12
ERCC3-203ENST00000445889 CKAP4Q07065 602 aaKnown RBP15.83■□□□□ 0.12
ERCC3-203ENST00000445889 MICALL1Q8N3F8 863 aa15.83■□□□□ 0.12
ERCC3-203ENST00000445889 SPATA4Q8NEY3 305 aa15.83■□□□□ 0.12
ERCC3-203ENST00000445889 TANGO6Q9C0B7 1094 aa15.83■□□□□ 0.12
ERCC3-203ENST00000445889 TCP11L1Q9NUJ3 509 aa15.83■□□□□ 0.12
ERCC3-203ENST00000445889 PACSIN2Q9UNF0 486 aaPredicted RBP15.83■□□□□ 0.12
ERCC3-203ENST00000445889 ZNF142P52746 1687 aaPredicted RBP15.83■□□□□ 0.12
ERCC3-203ENST00000445889 ADAMTS2O95450 1211 aa15.82■□□□□ 0.12
ERCC3-203ENST00000445889 TSPY3P0CV98 308 aa15.82■□□□□ 0.12
ERCC3-203ENST00000445889 TSPY8P0CW00 308 aa15.82■□□□□ 0.12
ERCC3-203ENST00000445889 MCM3P25205 808 aa15.82■□□□□ 0.12
ERCC3-203ENST00000445889 NAPAP54920 295 aa15.82■□□□□ 0.12
ERCC3-203ENST00000445889 UBE4AQ14139 1066 aa15.82■□□□□ 0.12
ERCC3-203ENST00000445889 SNX12Q9UMY4 172 aa15.82■□□□□ 0.12
ERCC3-203ENST00000445889 TAF1P21675 1872 aa15.82■□□□□ 0.12
ERCC3-203ENST00000445889 CICQ96RK0 1608 aaPredicted RBP15.82■□□□□ 0.12
ERCC3-203ENST00000445889 TIAM2Q8IVF5 1701 aa15.82■□□□□ 0.12
ERCC3-203ENST00000445889 ORC4O43929 436 aa15.82■□□□□ 0.12
ERCC3-203ENST00000445889 HIBADHP31937 336 aaKnown RBP15.82■□□□□ 0.12
ERCC3-203ENST00000445889 LIG3P49916 1009 aa15.82■□□□□ 0.12
ERCC3-203ENST00000445889 KIF11P52732 1056 aa15.82■□□□□ 0.12
ERCC3-203ENST00000445889 VAV2P52735 878 aa15.82■□□□□ 0.12
ERCC3-203ENST00000445889 TRADDQ15628 312 aa15.82■□□□□ 0.12
ERCC3-203ENST00000445889 PARP10Q53GL7 1025 aa15.82■□□□□ 0.12
ERCC3-203ENST00000445889 DZIP1Q86YF9 867 aaKnown RBP15.82■□□□□ 0.12
ERCC3-203ENST00000445889 SH3RF3Q8TEJ3 882 aaPredicted RBP15.82■□□□□ 0.12
ERCC3-203ENST00000445889 TGFBRAP1Q8WUH2 860 aa15.82■□□□□ 0.12
ERCC3-203ENST00000445889 TBC1D7Q9P0N9 293 aa15.82■□□□□ 0.12
ERCC3-203ENST00000445889 PAPPAQ13219 1627 aa15.82■□□□□ 0.12
ERCC3-203ENST00000445889 LRRC53A6NM62 1247 aa15.81■□□□□ 0.12
ERCC3-203ENST00000445889 IRAK1P51617 712 aa15.81■□□□□ 0.12
ERCC3-203ENST00000445889 KCNB1Q14721 858 aa15.81■□□□□ 0.12
ERCC3-203ENST00000445889 MAPKAPK5Q8IW41 473 aa15.81■□□□□ 0.12
ERCC3-203ENST00000445889 IFT81Q8WYA0 676 aa15.81■□□□□ 0.12
ERCC3-203ENST00000445889 PYM1Q9BRP8 204 aaKnown RBP15.81■□□□□ 0.12
ERCC3-203ENST00000445889 NUP98P52948 1817 aa15.81■□□□□ 0.12
ERCC3-203ENST00000445889 STRCP1A6NGW2 1772 aa15.81■□□□□ 0.12
ERCC3-203ENST00000445889 M0R2N6 131 aa15.81■□□□□ 0.12
ERCC3-203ENST00000445889 STXBP3O00186 592 aa15.81■□□□□ 0.12
ERCC3-203ENST00000445889 KRT14P02533 472 aa15.81■□□□□ 0.12
ERCC3-203ENST00000445889 CCDC181Q5TID7 509 aa15.81■□□□□ 0.12
ERCC3-203ENST00000445889 POTEDQ86YR6 584 aa15.81■□□□□ 0.12
ERCC3-203ENST00000445889 BSDC1Q9NW68 430 aaPredicted RBP15.81■□□□□ 0.12
ERCC3-203ENST00000445889 MYH10P35580 1976 aa15.81■□□□□ 0.12
ERCC3-203ENST00000445889 ZNF335Q9H4Z2 1342 aaPredicted RBP15.81■□□□□ 0.12
ERCC3-203ENST00000445889 KLRF2D3W0D1 207 aa15.81■□□□□ 0.12
ERCC3-203ENST00000445889 EHBP1Q8NDI1 1231 aa15.81■□□□□ 0.12
ERCC3-203ENST00000445889 BCAS4Q8TDM0 211 aa15.81■□□□□ 0.12
ERCC3-203ENST00000445889 OSBPL9Q96SU4 736 aa15.81■□□□□ 0.12
ERCC3-203ENST00000445889 NUDT12Q9BQG2 462 aa15.81■□□□□ 0.12
ERCC3-203ENST00000445889 EFCC1Q9HA90 598 aa15.81■□□□□ 0.12
ERCC3-203ENST00000445889 DUOX1Q9NRD9 1551 aa15.81■□□□□ 0.12
ERCC3-203ENST00000445889 TARSL2A2RTX5 802 aaKnown RBP15.8■□□□□ 0.12
ERCC3-203ENST00000445889 SMCO2A6NFE2 343 aa15.8■□□□□ 0.12
ERCC3-203ENST00000445889 GNGT1P63211 74 aa15.8■□□□□ 0.12
ERCC3-203ENST00000445889 DHTKD1Q96HY7 919 aaPredicted RBP15.8■□□□□ 0.12
ERCC3-203ENST00000445889 TMEM47Q9BQJ4 181 aa15.8■□□□□ 0.12
ERCC3-203ENST00000445889 RBM12Q9NTZ6 932 aaKnown RBP15.8■□□□□ 0.12
ERCC3-203ENST00000445889 JRKLQ9Y4A0 524 aa15.8■□□□□ 0.12
ERCC3-203ENST00000445889 FLT1P17948 1338 aa15.8■□□□□ 0.12
ERCC3-203ENST00000445889 POTEMA6NI47 508 aa15.8■□□□□ 0.12
ERCC3-203ENST00000445889 ZEB2O60315 1214 aa15.8■□□□□ 0.12
ERCC3-203ENST00000445889 TACC1O75410 805 aa15.8■□□□□ 0.12
ERCC3-203ENST00000445889 GTF2A1P52655 376 aaPredicted RBP15.8■□□□□ 0.12
ERCC3-203ENST00000445889 PDE4CQ08493 712 aa15.8■□□□□ 0.12
ERCC3-203ENST00000445889 TDRD12Q587J7 1177 aaKnown RBP15.8■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms