RNA–Protein interactions for RNA: ENST00000445667.6

USE1-202, Transcript of unconventional SNARE in the ER 1, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene USE1, Length 795 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-202ENST00000445667 SMPD1P17405 629 aa17.16■□□□□ 0.34
USE1-202ENST00000445667 CCSAPQ6IQ19 270 aaPredicted RBP17.16■□□□□ 0.34
USE1-202ENST00000445667 NFXL1Q6ZNB6 911 aa17.16■□□□□ 0.34
USE1-202ENST00000445667 RASEFQ8IZ41 740 aa17.16■□□□□ 0.34
USE1-202ENST00000445667 TMEM87BQ96K49 555 aa17.16■□□□□ 0.34
USE1-202ENST00000445667 TAAR1Q96RJ0 339 aa17.16■□□□□ 0.34
USE1-202ENST00000445667 PIGSQ96S52 555 aa17.16■□□□□ 0.34
USE1-202ENST00000445667 TSEN34Q9BSV6 310 aaKnown RBP17.16■□□□□ 0.34
USE1-202ENST00000445667 AMNQ9BXJ7 453 aa17.16■□□□□ 0.34
USE1-202ENST00000445667 RIOX1Q9H6W3 641 aa17.16■□□□□ 0.34
USE1-202ENST00000445667 A0A1W2PQ45 241 aaPredicted RBP17.15■□□□□ 0.34
USE1-202ENST00000445667 A0A1W2PQY0 241 aa17.15■□□□□ 0.34
USE1-202ENST00000445667 CCDC69A6NI79 296 aa17.15■□□□□ 0.34
USE1-202ENST00000445667 CENPBP07199 599 aaPredicted RBP17.15■□□□□ 0.34
USE1-202ENST00000445667 ACLYP53396 1101 aa17.15■□□□□ 0.34
USE1-202ENST00000445667 GJA9P57773 515 aa17.15■□□□□ 0.34
USE1-202ENST00000445667 TRIM60Q495X7 471 aa17.15■□□□□ 0.34
USE1-202ENST00000445667 IQSEC1Q6DN90 963 aa17.15■□□□□ 0.34
USE1-202ENST00000445667 MCF2L2Q86YR7 1114 aa17.15■□□□□ 0.34
USE1-202ENST00000445667 PIBF1Q8WXW3 757 aa17.15■□□□□ 0.34
USE1-202ENST00000445667 NEK1Q96PY6 1258 aa17.15■□□□□ 0.34
USE1-202ENST00000445667 MTA3Q9BTC8 594 aa17.15■□□□□ 0.34
USE1-202ENST00000445667 UPF3AQ9H1J1 476 aaKnown RBP17.15■□□□□ 0.34
USE1-202ENST00000445667 PRO3102Q9H379 93 aa17.15■□□□□ 0.34
USE1-202ENST00000445667 SPC25Q9HBM1 224 aa17.15■□□□□ 0.34
USE1-202ENST00000445667 VTA1Q9NP79 307 aa17.15■□□□□ 0.34
USE1-202ENST00000445667 COL20A1Q9P218 1284 aa17.15■□□□□ 0.34
USE1-202ENST00000445667 GNEQ9Y223 722 aaKnown RBP17.15■□□□□ 0.34
USE1-202ENST00000445667 CTAGE5O15320 804 aa17.14■□□□□ 0.33
USE1-202ENST00000445667 DYNC1LI2O43237 492 aaPredicted RBP17.14■□□□□ 0.33
USE1-202ENST00000445667 CFBP00751 764 aa17.14■□□□□ 0.33
USE1-202ENST00000445667 RXRAP19793 462 aa17.14■□□□□ 0.33
USE1-202ENST00000445667 MAGEA10P43363 369 aaPredicted RBP17.14■□□□□ 0.33
USE1-202ENST00000445667 BEX3Q00994 111 aa17.14■□□□□ 0.33
USE1-202ENST00000445667 PDE4DQ08499 809 aa17.14■□□□□ 0.33
USE1-202ENST00000445667 ADCK5Q3MIX3 580 aa17.14■□□□□ 0.33
USE1-202ENST00000445667 GNASQ5JWF2 1037 aa17.14■□□□□ 0.33
USE1-202ENST00000445667 RAB11FIP4Q86YS3 637 aa17.14■□□□□ 0.33
USE1-202ENST00000445667 TMTC2Q8N394 836 aa17.14■□□□□ 0.33
USE1-202ENST00000445667 DNERQ8NFT8 737 aa17.14■□□□□ 0.33
USE1-202ENST00000445667 SYTL5Q8TDW5 730 aaPredicted RBP17.14■□□□□ 0.33
USE1-202ENST00000445667 GDF15Q99988 308 aa17.14■□□□□ 0.33
USE1-202ENST00000445667 PCDHA1Q9Y5I3 950 aa17.14■□□□□ 0.33
USE1-202ENST00000445667 LOC102724159A0A0B4J2E5 919 aa17.13■□□□□ 0.33
USE1-202ENST00000445667 MOXD2PA6NHM9 499 aa17.13■□□□□ 0.33
USE1-202ENST00000445667 OPLAHO14841 1288 aa17.13■□□□□ 0.33
USE1-202ENST00000445667 DDAH1O94760 285 aa17.13■□□□□ 0.33
USE1-202ENST00000445667 ASGR1P07306 291 aa17.13■□□□□ 0.33
USE1-202ENST00000445667 EDNRBP24530 442 aa17.13■□□□□ 0.33
USE1-202ENST00000445667 CST5P28325 142 aaPredicted RBP17.13■□□□□ 0.33
USE1-202ENST00000445667 LIFRP42702 1097 aa17.13■□□□□ 0.33
USE1-202ENST00000445667 SNX17Q15036 470 aa17.13■□□□□ 0.33
USE1-202ENST00000445667 PWP2Q15269 919 aaKnown RBP17.13■□□□□ 0.33
USE1-202ENST00000445667 TLK2Q86UE8 772 aa17.13■□□□□ 0.33
USE1-202ENST00000445667 PCSK9Q8NBP7 692 aaKnown RBP17.13■□□□□ 0.33
USE1-202ENST00000445667 CTCFLQ8NI51 663 aaPredicted RBP17.13■□□□□ 0.33
USE1-202ENST00000445667 TCEANC2Q96MN5 208 aa17.13■□□□□ 0.33
USE1-202ENST00000445667 MAP3K14Q99558 947 aa17.13■□□□□ 0.33
USE1-202ENST00000445667 CEP290O15078 2479 aa17.13■□□□□ 0.33
USE1-202ENST00000445667 PNMA6FA0A0J9YX94 578 aa17.12■□□□□ 0.33
USE1-202ENST00000445667 MDM2Q00987 491 aaPredicted RBP17.12■□□□□ 0.33
USE1-202ENST00000445667 EXOSC10Q01780 885 aaKnown RBP17.12■□□□□ 0.33
USE1-202ENST00000445667 TLE2Q04725 743 aa17.12■□□□□ 0.33
USE1-202ENST00000445667 TSGA10IPQ3SY00 556 aa17.12■□□□□ 0.33
USE1-202ENST00000445667 C1orf53Q5VUE5 145 aa17.12■□□□□ 0.33
USE1-202ENST00000445667 ERICH6BQ5W0A0 696 aa17.12■□□□□ 0.33
USE1-202ENST00000445667 CMTR1Q8N1G2 835 aaKnown RBP17.12■□□□□ 0.33
USE1-202ENST00000445667 VTI1AQ96AJ9 217 aa17.12■□□□□ 0.33
USE1-202ENST00000445667 MPHOSPH6Q99547 160 aaKnown RBP17.12■□□□□ 0.33
USE1-202ENST00000445667 WDR11Q9BZH6 1224 aa17.12■□□□□ 0.33
USE1-202ENST00000445667 MAF1Q9H063 256 aa17.12■□□□□ 0.33
USE1-202ENST00000445667 AP5M1Q9H0R1 490 aa17.12■□□□□ 0.33
USE1-202ENST00000445667 STARD7Q9NQZ5 370 aa17.12■□□□□ 0.33
USE1-202ENST00000445667 LRRC37A2A6NM11 1700 aa17.12■□□□□ 0.33
USE1-202ENST00000445667 PLEKHA8P1O95397 391 aa17.11■□□□□ 0.33
USE1-202ENST00000445667 KIF5BP33176 963 aa17.11■□□□□ 0.33
USE1-202ENST00000445667 HSD17B4P51659 736 aa17.11■□□□□ 0.33
USE1-202ENST00000445667 NKX3-2P78367 333 aa17.11■□□□□ 0.33
USE1-202ENST00000445667 FSCN1Q16658 493 aaKnown RBP17.11■□□□□ 0.33
USE1-202ENST00000445667 DUSP28Q4G0W2 176 aa17.11■□□□□ 0.33
USE1-202ENST00000445667 SH3RF1Q7Z6J0 888 aa17.11■□□□□ 0.33
USE1-202ENST00000445667 NSUN6Q8TEA1 469 aaKnown RBP17.11■□□□□ 0.33
USE1-202ENST00000445667 RMDN3Q96TC7 470 aa17.11■□□□□ 0.33
USE1-202ENST00000445667 PRDM5Q9NQX1 630 aaPredicted RBP17.11■□□□□ 0.33
USE1-202ENST00000445667 SLC12A7Q9Y666 1083 aa17.11■□□□□ 0.33
USE1-202ENST00000445667 MYH6P13533 1939 aa17.1■□□□□ 0.33
USE1-202ENST00000445667 RBM47A0AV96 593 aaKnown RBP17.1■□□□□ 0.33
USE1-202ENST00000445667 B4DLN1 442 aa17.1■□□□□ 0.33
USE1-202ENST00000445667 PQBP1O60828 265 aaKnown RBP17.1■□□□□ 0.33
USE1-202ENST00000445667 EIF2AK2P19525 551 aaKnown RBP17.1■□□□□ 0.33
USE1-202ENST00000445667 HOXA13P31271 388 aaPredicted RBP17.1■□□□□ 0.33
USE1-202ENST00000445667 MRPL12P52815 198 aaKnown RBP17.1■□□□□ 0.33
USE1-202ENST00000445667 ARHGEF16Q5VV41 709 aa17.1■□□□□ 0.33
USE1-202ENST00000445667 DHX32Q7L7V1 743 aaKnown RBP17.1■□□□□ 0.33
USE1-202ENST00000445667 SRBD1Q8N5C6 995 aaKnown RBP17.1■□□□□ 0.33
USE1-202ENST00000445667 GLT1D1Q96MS3 346 aa17.1■□□□□ 0.33
USE1-202ENST00000445667 SPZ1Q9BXG8 430 aa17.1■□□□□ 0.33
USE1-202ENST00000445667 PRKAG2Q9UGJ0 569 aa17.1■□□□□ 0.33
USE1-202ENST00000445667 Q9Y3F1 56 aa17.1■□□□□ 0.33
USE1-202ENST00000445667 BAZ2BQ9UIF8 2168 aaKnown RBP17.09■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms