RNA–Protein interactions for RNA: ENST00000445336.2

BRAFP1-201, Transcript of BRAF pseudogene 1, humanhuman

BASIC

Gene BRAFP1, Length 2,703 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAFP1-201ENST00000445336 CHPF2Q9P2E5 772 aa8.1□□□□□ -1.11
BRAFP1-201ENST00000445336 LINC01565O15544 149 aa8.1□□□□□ -1.11
BRAFP1-201ENST00000445336 SELPP16109 830 aa8.1□□□□□ -1.11
BRAFP1-201ENST00000445336 RGS3P49796 1198 aa8.1□□□□□ -1.11
BRAFP1-201ENST00000445336 AIMP1Q12904 312 aaKnown RBP8.1□□□□□ -1.11
BRAFP1-201ENST00000445336 FANCIQ9NVI1 1328 aa8.1□□□□□ -1.11
BRAFP1-201ENST00000445336 ANKRD18BA2A2Z9 1011 aa8.09□□□□□ -1.11
BRAFP1-201ENST00000445336 IGSF3O75054 1194 aa8.09□□□□□ -1.11
BRAFP1-201ENST00000445336 STARD6P59095 220 aa8.09□□□□□ -1.11
BRAFP1-201ENST00000445336 ZNF252P-AS1Q0IIN9 211 aa8.09□□□□□ -1.11
BRAFP1-201ENST00000445336 PPP2R5DQ14738 602 aa8.09□□□□□ -1.11
BRAFP1-201ENST00000445336 CFAP53Q96M91 514 aa8.09□□□□□ -1.11
BRAFP1-201ENST00000445336 RHOBTB2Q9BYZ6 727 aa8.09□□□□□ -1.11
BRAFP1-201ENST00000445336 SIPA1L1O43166 1804 aa8.09□□□□□ -1.11
BRAFP1-201ENST00000445336 USP9XQ93008 2570 aaPredicted RBP8.09□□□□□ -1.11
BRAFP1-201ENST00000445336 A0A087WV48 116 aa8.09□□□□□ -1.11
BRAFP1-201ENST00000445336 NEFMP07197 916 aa8.09□□□□□ -1.11
BRAFP1-201ENST00000445336 ZNF806P0C7X5 589 aa8.09□□□□□ -1.11
BRAFP1-201ENST00000445336 RDXP35241 583 aaKnown RBP8.09□□□□□ -1.11
BRAFP1-201ENST00000445336 NFIAQ12857 509 aa8.09□□□□□ -1.11
BRAFP1-201ENST00000445336 CYP26B1Q9NR63 512 aa8.09□□□□□ -1.11
BRAFP1-201ENST00000445336 SRPK3Q9UPE1 567 aa8.09□□□□□ -1.11
BRAFP1-201ENST00000445336 SIT1Q9Y3P8 196 aa8.09□□□□□ -1.11
BRAFP1-201ENST00000445336 C2CD4DB7Z1M9 353 aa8.09□□□□□ -1.12
BRAFP1-201ENST00000445336 ATP5J2-PTCD1G3V325 749 aa8.09□□□□□ -1.12
BRAFP1-201ENST00000445336 U2SURPO15042 1029 aaKnown RBP8.09□□□□□ -1.12
BRAFP1-201ENST00000445336 ERCC3P19447 782 aa8.09□□□□□ -1.12
BRAFP1-201ENST00000445336 ITGA6P23229 1130 aa8.09□□□□□ -1.12
BRAFP1-201ENST00000445336 SPEM2Q0P670 501 aa8.09□□□□□ -1.12
BRAFP1-201ENST00000445336 COLEC12Q5KU26 742 aa8.09□□□□□ -1.12
BRAFP1-201ENST00000445336 WDR78Q5VTH9 848 aa8.09□□□□□ -1.12
BRAFP1-201ENST00000445336 KANK3Q6NY19 840 aa8.09□□□□□ -1.12
BRAFP1-201ENST00000445336 RUFY4Q6ZNE9 571 aa8.09□□□□□ -1.12
BRAFP1-201ENST00000445336 NANOS1Q8WY41 292 aaKnown RBP8.09□□□□□ -1.12
BRAFP1-201ENST00000445336 RIN2Q8WYP3 895 aaPredicted RBP8.09□□□□□ -1.12
BRAFP1-201ENST00000445336 PANK3Q9H999 370 aa8.09□□□□□ -1.12
BRAFP1-201ENST00000445336 ANKMY1Q9P2S6 941 aa8.09□□□□□ -1.12
BRAFP1-201ENST00000445336 FBXL21Q9UKT6 434 aa8.09□□□□□ -1.12
BRAFP1-201ENST00000445336 PCDHGA5Q9Y5G8 931 aa8.09□□□□□ -1.12
BRAFP1-201ENST00000445336 UPK3BL1B0FP48 263 aa8.08□□□□□ -1.12
BRAFP1-201ENST00000445336 UPK3BL2E5RIL1 263 aa8.08□□□□□ -1.12
BRAFP1-201ENST00000445336 E9PAM4 449 aa8.08□□□□□ -1.12
BRAFP1-201ENST00000445336 RPS9P46781 194 aaKnown RBP8.08□□□□□ -1.12
BRAFP1-201ENST00000445336 ACVR2BQ13705 512 aa8.08□□□□□ -1.12
BRAFP1-201ENST00000445336 FIBCD1Q8N539 461 aa8.08□□□□□ -1.12
BRAFP1-201ENST00000445336 PPIL4Q8WUA2 492 aaKnown RBP eCLIP8.08□□□□□ -1.12
BRAFP1-201ENST00000445336 RUNDC1Q96C34 613 aa8.08□□□□□ -1.12
BRAFP1-201ENST00000445336 MMP19Q99542 508 aa8.08□□□□□ -1.12
BRAFP1-201ENST00000445336 PI4K2AQ9BTU6 479 aa8.08□□□□□ -1.12
BRAFP1-201ENST00000445336 METTL22Q9BUU2 404 aaPredicted RBP8.08□□□□□ -1.12
BRAFP1-201ENST00000445336 BCO2Q9BYV7 579 aa8.08□□□□□ -1.12
BRAFP1-201ENST00000445336 TBC1D17Q9HA65 648 aa8.08□□□□□ -1.12
BRAFP1-201ENST00000445336 MTUS1Q9ULD2 1270 aa8.08□□□□□ -1.12
BRAFP1-201ENST00000445336 EP300Q09472 2414 aaPredicted RBP8.08□□□□□ -1.12
BRAFP1-201ENST00000445336 FOCADQ5VW36 1801 aa8.08□□□□□ -1.12
BRAFP1-201ENST00000445336 RHBDL3P58872 404 aa8.08□□□□□ -1.12
BRAFP1-201ENST00000445336 TNFAIP2Q03169 654 aa8.08□□□□□ -1.12
BRAFP1-201ENST00000445336 HNRNPDQ14103 355 aaKnown RBP8.08□□□□□ -1.12
BRAFP1-201ENST00000445336 STPG1Q5TH74 334 aa8.08□□□□□ -1.12
BRAFP1-201ENST00000445336 RIOX2Q8IUF8 465 aa8.08□□□□□ -1.12
BRAFP1-201ENST00000445336 CASP10Q92851 521 aa8.08□□□□□ -1.12
BRAFP1-201ENST00000445336 DDX23Q9BUQ8 820 aaKnown RBP8.08□□□□□ -1.12
BRAFP1-201ENST00000445336 SCNM1Q9BWG6 230 aa8.08□□□□□ -1.12
BRAFP1-201ENST00000445336 CCDC8Q9H0W5 538 aaPredicted RBP8.08□□□□□ -1.12
BRAFP1-201ENST00000445336 PNNQ9H307 717 aaKnown RBP8.08□□□□□ -1.12
BRAFP1-201ENST00000445336 SLC2A4RGQ9NR83 387 aa8.08□□□□□ -1.12
BRAFP1-201ENST00000445336 CFAP47Q6ZTR5 3102 aa8.07□□□□□ -1.12
BRAFP1-201ENST00000445336 LOC102724159A0A0B4J2E5 919 aa8.07□□□□□ -1.12
BRAFP1-201ENST00000445336 H7C1W4 665 aa8.07□□□□□ -1.12
BRAFP1-201ENST00000445336 DDX58O95786 925 aaKnown RBP8.07□□□□□ -1.12
BRAFP1-201ENST00000445336 LINC00271P0C7V0 271 aa8.07□□□□□ -1.12
BRAFP1-201ENST00000445336 EIF2S2P20042 333 aaKnown RBP8.07□□□□□ -1.12
BRAFP1-201ENST00000445336 TCP10Q12799 353 aa8.07□□□□□ -1.12
BRAFP1-201ENST00000445336 FOXC1Q12948 553 aa8.07□□□□□ -1.12
BRAFP1-201ENST00000445336 PWP2Q15269 919 aaKnown RBP8.07□□□□□ -1.12
BRAFP1-201ENST00000445336 KIAA1841Q6NSI8 718 aa8.07□□□□□ -1.12
BRAFP1-201ENST00000445336 PJA1Q8NG27 643 aa8.07□□□□□ -1.12
BRAFP1-201ENST00000445336 TOP1MTQ969P6 601 aa8.07□□□□□ -1.12
BRAFP1-201ENST00000445336 DHX36Q9H2U1 1008 aaKnown RBP8.07□□□□□ -1.12
BRAFP1-201ENST00000445336 ADAM7Q9H2U9 754 aa8.07□□□□□ -1.12
BRAFP1-201ENST00000445336 MYH2Q9UKX2 1941 aa8.07□□□□□ -1.12
BRAFP1-201ENST00000445336 PDS5AQ29RF7 1337 aaKnown RBP8.07□□□□□ -1.12
BRAFP1-201ENST00000445336 SNAI1O95863 264 aaPredicted RBP8.07□□□□□ -1.12
BRAFP1-201ENST00000445336 TDGF1P13385 188 aa8.07□□□□□ -1.12
BRAFP1-201ENST00000445336 CTNNB1P35222 781 aa8.07□□□□□ -1.12
BRAFP1-201ENST00000445336 PDXDC1Q6P996 788 aa8.07□□□□□ -1.12
BRAFP1-201ENST00000445336 SIX5Q8N196 739 aa8.07□□□□□ -1.12
BRAFP1-201ENST00000445336 AP5M1Q9H0R1 490 aa8.07□□□□□ -1.12
BRAFP1-201ENST00000445336 TSPYL4Q9UJ04 414 aa8.07□□□□□ -1.12
BRAFP1-201ENST00000445336 GNEQ9Y223 722 aaKnown RBP8.07□□□□□ -1.12
BRAFP1-201ENST00000445336 COG2Q14746 738 aa8.06□□□□□ -1.12
BRAFP1-201ENST00000445336 FSCN1Q16658 493 aaKnown RBP8.06□□□□□ -1.12
BRAFP1-201ENST00000445336 AASDHQ4L235 1098 aaPredicted RBP8.06□□□□□ -1.12
BRAFP1-201ENST00000445336 SIN3AQ96ST3 1273 aa8.06□□□□□ -1.12
BRAFP1-201ENST00000445336 DZANK1Q9NVP4 752 aa8.06□□□□□ -1.12
BRAFP1-201ENST00000445336 TEX51A0A1B0GUA7 166 aa8.06□□□□□ -1.12
BRAFP1-201ENST00000445336 GRM6O15303 877 aa8.06□□□□□ -1.12
BRAFP1-201ENST00000445336 CAND2O75155 1236 aa8.06□□□□□ -1.12
BRAFP1-201ENST00000445336 LGR5O75473 907 aa8.06□□□□□ -1.12
BRAFP1-201ENST00000445336 CFHP08603 1231 aa8.06□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms