RNA–Protein interactions for RNA: ENST00000445184.1

LINC01004-201, Transcript of long intergenic non-protein coding RNA 1004, humanhuman

TSL 5 BASIC

Gene LINC01004, Length 686 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01004-201ENST00000445184 MAP3K11Q16584 847 aa6.03□□□□□ -1.44
LINC01004-201ENST00000445184 TMC3Q7Z5M5 1100 aa6.03□□□□□ -1.44
LINC01004-201ENST00000445184 CKAP2LQ8IYA6 745 aa6.03□□□□□ -1.44
LINC01004-201ENST00000445184 PHACTR4Q8IZ21 702 aa6.03□□□□□ -1.44
LINC01004-201ENST00000445184 PMFBP1Q8TBY8 1022 aa6.03□□□□□ -1.44
LINC01004-201ENST00000445184 UBP1Q9NZI7 540 aa6.03□□□□□ -1.44
LINC01004-201ENST00000445184 SIRPGQ9P1W8 387 aa6.03□□□□□ -1.44
LINC01004-201ENST00000445184 MINDY4BA8MYZ0 360 aa6.02□□□□□ -1.45
LINC01004-201ENST00000445184 CHURC1-FNTBB4DL54 471 aa6.02□□□□□ -1.45
LINC01004-201ENST00000445184 PLATP00750 562 aa6.02□□□□□ -1.45
LINC01004-201ENST00000445184 ATF2P15336 505 aa6.02□□□□□ -1.45
LINC01004-201ENST00000445184 DLX2Q07687 328 aaPredicted RBP6.02□□□□□ -1.45
LINC01004-201ENST00000445184 TCEAL1Q15170 157 aa6.02□□□□□ -1.45
LINC01004-201ENST00000445184 RBBP8NLQ8NC74 664 aaPredicted RBP6.02□□□□□ -1.45
LINC01004-201ENST00000445184 ERVK13-1Q9NX77 482 aa6.02□□□□□ -1.45
LINC01004-201ENST00000445184 IMPACTQ9P2X3 320 aa6.02□□□□□ -1.45
LINC01004-201ENST00000445184 PRKAG3Q9UGI9 489 aa6.02□□□□□ -1.45
LINC01004-201ENST00000445184 KLHL3Q9UH77 587 aa6.02□□□□□ -1.45
LINC01004-201ENST00000445184 SBNO2Q9Y2G9 1366 aa6.02□□□□□ -1.45
LINC01004-201ENST00000445184 F6X3S4 739 aa6.01□□□□□ -1.45
LINC01004-201ENST00000445184 NCLP19338 710 aaKnown RBP6.01□□□□□ -1.45
LINC01004-201ENST00000445184 GIPRP48546 466 aa6.01□□□□□ -1.45
LINC01004-201ENST00000445184 FAM160A1Q05DH4 1040 aa6.01□□□□□ -1.45
LINC01004-201ENST00000445184 TBC1D10BQ4KMP7 808 aaPredicted RBP6.01□□□□□ -1.45
LINC01004-201ENST00000445184 REXO1Q8N1G1 1221 aaKnown RBP6.01□□□□□ -1.45
LINC01004-201ENST00000445184 GOLM1Q8NBJ4 401 aa6.01□□□□□ -1.45
LINC01004-201ENST00000445184 GATAD2BQ8WXI9 593 aa6.01□□□□□ -1.45
LINC01004-201ENST00000445184 KIF2CQ99661 725 aa6.01□□□□□ -1.45
LINC01004-201ENST00000445184 RNF38Q9H0F5 515 aa6.01□□□□□ -1.45
LINC01004-201ENST00000445184 REV1Q9UBZ9 1251 aa6.01□□□□□ -1.45
LINC01004-201ENST00000445184 F13A1P00488 732 aa6□□□□□ -1.45
LINC01004-201ENST00000445184 MPP2Q14168 576 aa6□□□□□ -1.45
LINC01004-201ENST00000445184 NBPF9Q3BBW0 867 aa6□□□□□ -1.45
LINC01004-201ENST00000445184 PAQR3Q6TCH7 311 aa6□□□□□ -1.45
LINC01004-201ENST00000445184 ANKS3Q6ZW76 656 aa6□□□□□ -1.45
LINC01004-201ENST00000445184 FAM169BQ8N8A8 192 aa6□□□□□ -1.45
LINC01004-201ENST00000445184 KISS1RQ969F8 398 aaPredicted RBP6□□□□□ -1.45
LINC01004-201ENST00000445184 RNPC3Q96LT9 517 aaKnown RBP6□□□□□ -1.45
LINC01004-201ENST00000445184 PCED1AQ9H1Q7 454 aa6□□□□□ -1.45
LINC01004-201ENST00000445184 PRR36Q9H6K5 1346 aa5.99□□□□□ -1.45
LINC01004-201ENST00000445184 A0A1W2PQ27 194 aa5.99□□□□□ -1.45
LINC01004-201ENST00000445184 A0A1W2PQ64 194 aa5.99□□□□□ -1.45
LINC01004-201ENST00000445184 A0A1W2PQC6 194 aa5.99□□□□□ -1.45
LINC01004-201ENST00000445184 A0A1W2PQD8 194 aa5.99□□□□□ -1.45
LINC01004-201ENST00000445184 ANKRD62A6NC57 917 aa5.99□□□□□ -1.45
LINC01004-201ENST00000445184 PRAMEF1O95521 474 aa5.99□□□□□ -1.45
LINC01004-201ENST00000445184 BPNT1O95861 308 aa5.99□□□□□ -1.45
LINC01004-201ENST00000445184 CYBBP04839 570 aa5.99□□□□□ -1.45
LINC01004-201ENST00000445184 SSBP05455 408 aaKnown RBP eCLIP5.99□□□□□ -1.45
LINC01004-201ENST00000445184 NCAM1P13591 858 aa5.99□□□□□ -1.45
LINC01004-201ENST00000445184 HSD3B2P26439 372 aa5.99□□□□□ -1.45
LINC01004-201ENST00000445184 SARSP49591 514 aaKnown RBP5.99□□□□□ -1.45
LINC01004-201ENST00000445184 APOBRQ0VD83 1088 aa5.99□□□□□ -1.45
LINC01004-201ENST00000445184 BMS1Q14692 1282 aaKnown RBP5.99□□□□□ -1.45
LINC01004-201ENST00000445184 BNC2Q6ZN30 1099 aaPredicted RBP5.99□□□□□ -1.45
LINC01004-201ENST00000445184 JMYQ8N9B5 988 aa5.99□□□□□ -1.45
LINC01004-201ENST00000445184 NKD1Q969G9 470 aa5.99□□□□□ -1.45
LINC01004-201ENST00000445184 SRRTQ9BXP5 876 aaKnown RBP5.99□□□□□ -1.45
LINC01004-201ENST00000445184 BRINP2Q9C0B6 783 aa5.99□□□□□ -1.45
LINC01004-201ENST00000445184 ZNRF3Q9ULT6 936 aa5.99□□□□□ -1.45
LINC01004-201ENST00000445184 TSC22D4Q9Y3Q8 395 aa5.99□□□□□ -1.45
LINC01004-201ENST00000445184 ATE1O95260 518 aa5.98□□□□□ -1.45
LINC01004-201ENST00000445184 SNW1Q13573 536 aaKnown RBP5.98□□□□□ -1.45
LINC01004-201ENST00000445184 PLEKHG4Q58EX7 1191 aa5.98□□□□□ -1.45
LINC01004-201ENST00000445184 REC114Q7Z4M0 266 aa5.98□□□□□ -1.45
LINC01004-201ENST00000445184 ZNF761Q86XN6 746 aaPredicted RBP5.98□□□□□ -1.45
LINC01004-201ENST00000445184 FBXO27Q8NI29 283 aa5.98□□□□□ -1.45
LINC01004-201ENST00000445184 JMJD8Q96S16 334 aa5.98□□□□□ -1.45
LINC01004-201ENST00000445184 CDADC1Q9BWV3 514 aa5.98□□□□□ -1.45
LINC01004-201ENST00000445184 CCDC113Q9H0I3 377 aa5.98□□□□□ -1.45
LINC01004-201ENST00000445184 WDR26Q9H7D7 661 aa5.98□□□□□ -1.45
LINC01004-201ENST00000445184 EHMT1Q9H9B1 1298 aa5.98□□□□□ -1.45
LINC01004-201ENST00000445184 SNTG2Q9NY99 539 aa5.98□□□□□ -1.45
LINC01004-201ENST00000445184 NTMQ9P121 344 aa5.98□□□□□ -1.45
LINC01004-201ENST00000445184 MRPL42Q9Y6G3 142 aaKnown RBP5.98□□□□□ -1.45
LINC01004-201ENST00000445184 RGS13O14921 159 aa5.97□□□□□ -1.45
LINC01004-201ENST00000445184 SRGAP3O43295 1099 aa5.97□□□□□ -1.45
LINC01004-201ENST00000445184 SIGLEC6O43699 453 aa5.97□□□□□ -1.45
LINC01004-201ENST00000445184 DBHP09172 617 aa5.97□□□□□ -1.45
LINC01004-201ENST00000445184 CEBPAP49715 358 aaPredicted RBP5.97□□□□□ -1.45
LINC01004-201ENST00000445184 CASP7P55210 303 aa5.97□□□□□ -1.45
LINC01004-201ENST00000445184 MVKQ03426 396 aa5.97□□□□□ -1.45
LINC01004-201ENST00000445184 TNNI3KQ59H18 835 aa5.97□□□□□ -1.45
LINC01004-201ENST00000445184 SNAP47Q5SQN1 464 aa5.97□□□□□ -1.45
LINC01004-201ENST00000445184 OR6P1Q8NGX9 317 aa5.97□□□□□ -1.45
LINC01004-201ENST00000445184 HNRNPLLQ8WVV9 542 aaKnown RBP5.97□□□□□ -1.45
LINC01004-201ENST00000445184 ZNF747Q9BV97 191 aa5.97□□□□□ -1.45
LINC01004-201ENST00000445184 VPS11Q9H270 941 aa5.97□□□□□ -1.45
LINC01004-201ENST00000445184 ST6GALNAC2Q9UJ37 374 aa5.97□□□□□ -1.45
LINC01004-201ENST00000445184 PLA2G2DQ9UNK4 145 aa5.97□□□□□ -1.45
LINC01004-201ENST00000445184 HCFC2Q9Y5Z7 792 aa5.97□□□□□ -1.45
LINC01004-201ENST00000445184 FAM221BA6H8Z2 402 aa5.96□□□□□ -1.46
LINC01004-201ENST00000445184 NBPF12Q5TAG4 269 aaPredicted RBP5.96□□□□□ -1.46
LINC01004-201ENST00000445184 ANKRD13AQ8IZ07 590 aa5.96□□□□□ -1.46
LINC01004-201ENST00000445184 C19orf47Q8N9M1 422 aaKnown RBP5.96□□□□□ -1.46
LINC01004-201ENST00000445184 MRFAP1L1Q96HT8 127 aa5.96□□□□□ -1.46
LINC01004-201ENST00000445184 GPATCH3Q96I76 525 aa5.96□□□□□ -1.46
LINC01004-201ENST00000445184 DEPDC7Q96QD5 511 aa5.96□□□□□ -1.46
LINC01004-201ENST00000445184 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP5.96□□□□□ -1.465e-15■□□□□ 9.6
LINC01004-201ENST00000445184 PPT2Q9UMR5 302 aa5.96□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 87.3 ms