RNA–Protein interactions for RNA: ENST00000445153.1

SMARCAL1-210, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

TSL 5

Gene SMARCAL1, Length 484 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-210ENST00000445153 PDHBP11177 359 aa16.72■□□□□ 0.27
SMARCAL1-210ENST00000445153 TOP1P11387 765 aaKnown RBP16.72■□□□□ 0.27
SMARCAL1-210ENST00000445153 ALDH5A1P51649 535 aaPredicted RBP16.72■□□□□ 0.27
SMARCAL1-210ENST00000445153 HDAC1Q13547 482 aaPredicted RBP16.72■□□□□ 0.27
SMARCAL1-210ENST00000445153 ADGRE1Q14246 886 aa16.72■□□□□ 0.27
SMARCAL1-210ENST00000445153 DUSP28Q4G0W2 176 aa16.72■□□□□ 0.27
SMARCAL1-210ENST00000445153 MCMDC2Q4G0Z9 681 aa16.72■□□□□ 0.27
SMARCAL1-210ENST00000445153 PSRC1Q6PGN9 363 aaPredicted RBP16.72■□□□□ 0.27
SMARCAL1-210ENST00000445153 SLC30A10Q6XR72 485 aa16.72■□□□□ 0.27
SMARCAL1-210ENST00000445153 OTOP2Q7RTS6 562 aa16.72■□□□□ 0.27
SMARCAL1-210ENST00000445153 PPP1R13LQ8WUF5 828 aa16.72■□□□□ 0.27
SMARCAL1-210ENST00000445153 PRDM12Q9H4Q4 367 aa16.72■□□□□ 0.27
SMARCAL1-210ENST00000445153 SPTBN5Q9NRC6 3674 aaKnown RBP16.72■□□□□ 0.27
SMARCAL1-210ENST00000445153 TBC1D10CQ8IV04 446 aa16.71■□□□□ 0.27
SMARCAL1-210ENST00000445153 SCLYQ96I15 445 aa16.71■□□□□ 0.27
SMARCAL1-210ENST00000445153 WDR11Q9BZH6 1224 aa16.71■□□□□ 0.27
SMARCAL1-210ENST00000445153 YBX2Q9Y2T7 364 aaKnown RBP16.71■□□□□ 0.27
SMARCAL1-210ENST00000445153 RBM47A0AV96 593 aaKnown RBP16.7■□□□□ 0.26
SMARCAL1-210ENST00000445153 PTPDC1A2A3K4 754 aa16.7■□□□□ 0.26
SMARCAL1-210ENST00000445153 ZEB2O60315 1214 aa16.7■□□□□ 0.26
SMARCAL1-210ENST00000445153 CALML3P27482 149 aa16.7■□□□□ 0.26
SMARCAL1-210ENST00000445153 PPM1EQ8WY54 764 aa16.7■□□□□ 0.26
SMARCAL1-210ENST00000445153 ALDH8A1Q9H2A2 487 aaPredicted RBP16.7■□□□□ 0.26
SMARCAL1-210ENST00000445153 NKX2-4Q9H2Z4 354 aa16.7■□□□□ 0.26
SMARCAL1-210ENST00000445153 CPVLQ9H3G5 476 aa16.7■□□□□ 0.26
SMARCAL1-210ENST00000445153 TRMT13Q9NUP7 481 aaKnown RBP16.7■□□□□ 0.26
SMARCAL1-210ENST00000445153 SNHG28P0DPA3 235 aa16.69■□□□□ 0.26
SMARCAL1-210ENST00000445153 CYP2C9P11712 490 aa16.69■□□□□ 0.26
SMARCAL1-210ENST00000445153 RABGGTBP53611 331 aa16.69■□□□□ 0.26
SMARCAL1-210ENST00000445153 RPS6P62753 249 aaKnown RBP16.69■□□□□ 0.26
SMARCAL1-210ENST00000445153 PURAQ00577 322 aaKnown RBP16.69■□□□□ 0.26
SMARCAL1-210ENST00000445153 ZNF543Q08ER8 600 aa16.69■□□□□ 0.26
SMARCAL1-210ENST00000445153 COPS5Q92905 334 aa16.69■□□□□ 0.26
SMARCAL1-210ENST00000445153 ADD3Q9UEY8 706 aaKnown RBP16.69■□□□□ 0.26
SMARCAL1-210ENST00000445153 IGHDP01880 384 aa16.68■□□□□ 0.26
SMARCAL1-210ENST00000445153 MYL3P08590 195 aa16.68■□□□□ 0.26
SMARCAL1-210ENST00000445153 GOLGA8HP0CJ92 632 aa16.68■□□□□ 0.26
SMARCAL1-210ENST00000445153 MYOGP15173 224 aa16.68■□□□□ 0.26
SMARCAL1-210ENST00000445153 AKNAD1Q5T1N1 836 aa16.68■□□□□ 0.26
SMARCAL1-210ENST00000445153 RNF207Q6ZRF8 634 aa16.68■□□□□ 0.26
SMARCAL1-210ENST00000445153 TBC1D5Q92609 795 aa16.68■□□□□ 0.26
SMARCAL1-210ENST00000445153 TTC14Q96N46 770 aa16.68■□□□□ 0.26
SMARCAL1-210ENST00000445153 ZKSCAN3Q9BRR0 538 aa16.68■□□□□ 0.26
SMARCAL1-210ENST00000445153 LNPKQ9C0E8 428 aa16.68■□□□□ 0.26
SMARCAL1-210ENST00000445153 UBA5Q9GZZ9 404 aa16.68■□□□□ 0.26
SMARCAL1-210ENST00000445153 ZBTB47Q9UFB7 747 aaPredicted RBP16.68■□□□□ 0.26
SMARCAL1-210ENST00000445153 CHD9Q3L8U1 2897 aa16.68■□□□□ 0.26
SMARCAL1-210ENST00000445153 ZMYM6O95789 1325 aa16.68■□□□□ 0.26
SMARCAL1-210ENST00000445153 CCDC171Q6TFL3 1326 aa16.68■□□□□ 0.26
SMARCAL1-210ENST00000445153 RBAK-RBAKDNI3L0D1 243 aa16.67■□□□□ 0.26
SMARCAL1-210ENST00000445153 EDNRBP24530 442 aa16.67■□□□□ 0.26
SMARCAL1-210ENST00000445153 MFSD6Q6ZSS7 791 aa16.67■□□□□ 0.26
SMARCAL1-210ENST00000445153 SMC5Q8IY18 1101 aa16.67■□□□□ 0.26
SMARCAL1-210ENST00000445153 EXOC6Q8TAG9 804 aa16.67■□□□□ 0.26
SMARCAL1-210ENST00000445153 RILPL2Q969X0 211 aa16.67■□□□□ 0.26
SMARCAL1-210ENST00000445153 GAS2L1Q99501 681 aaPredicted RBP16.67■□□□□ 0.26
SMARCAL1-210ENST00000445153 SEZ6LQ9BYH1 1024 aa16.67■□□□□ 0.26
SMARCAL1-210ENST00000445153 MSRAQ9UJ68 235 aa16.67■□□□□ 0.26
SMARCAL1-210ENST00000445153 GBF1Q92538 1859 aa16.67■□□□□ 0.26
SMARCAL1-210ENST00000445153 NEDD4P46934 1319 aa16.67■□□□□ 0.26
SMARCAL1-210ENST00000445153 LOC102724159A0A0B4J2E5 919 aa16.66■□□□□ 0.26
SMARCAL1-210ENST00000445153 TRIM6-TRIM34B2RNG4 842 aa16.66■□□□□ 0.26
SMARCAL1-210ENST00000445153 ARIH2O95376 493 aa16.66■□□□□ 0.26
SMARCAL1-210ENST00000445153 SDSP20132 328 aa16.66■□□□□ 0.26
SMARCAL1-210ENST00000445153 TTLL4Q14679 1199 aa16.66■□□□□ 0.26
SMARCAL1-210ENST00000445153 PWP2Q15269 919 aaKnown RBP16.66■□□□□ 0.26
SMARCAL1-210ENST00000445153 RAB30Q15771 203 aa16.66■□□□□ 0.26
SMARCAL1-210ENST00000445153 CCDC85BQ15834 202 aaPredicted RBP16.66■□□□□ 0.26
SMARCAL1-210ENST00000445153 NBPF20Q3BBV1 942 aa16.66■□□□□ 0.26
SMARCAL1-210ENST00000445153 OR6J1Q8NGC5 347 aa16.66■□□□□ 0.26
SMARCAL1-210ENST00000445153 POLR3EQ9NVU0 708 aa16.66■□□□□ 0.26
SMARCAL1-210ENST00000445153 TNKSO95271 1327 aa16.66■□□□□ 0.26
SMARCAL1-210ENST00000445153 WDR19Q8NEZ3 1342 aa16.66■□□□□ 0.26
SMARCAL1-210ENST00000445153 MYO9BQ13459 2157 aa16.65■□□□□ 0.26
SMARCAL1-210ENST00000445153 PDE4DQ08499 809 aa16.65■□□□□ 0.26
SMARCAL1-210ENST00000445153 B4GALNT3Q6L9W6 998 aa16.65■□□□□ 0.26
SMARCAL1-210ENST00000445153 TICAM2Q86XR7 235 aa16.65■□□□□ 0.26
SMARCAL1-210ENST00000445153 RPUSD2Q8IZ73 545 aaKnown RBP16.65■□□□□ 0.26
SMARCAL1-210ENST00000445153 MTG1Q9BT17 334 aaPredicted RBP16.65■□□□□ 0.26
SMARCAL1-210ENST00000445153 SLC28A3Q9HAS3 691 aa16.65■□□□□ 0.26
SMARCAL1-210ENST00000445153 SLC4A7Q9Y6M7 1214 aa16.65■□□□□ 0.26
SMARCAL1-210ENST00000445153 TTC28Q96AY4 2481 aa16.65■□□□□ 0.26
SMARCAL1-210ENST00000445153 A6NJR5 290 aa16.64■□□□□ 0.25
SMARCAL1-210ENST00000445153 CPT1AP50416 773 aa16.64■□□□□ 0.25
SMARCAL1-210ENST00000445153 USH1GQ495M9 461 aa16.64■□□□□ 0.25
SMARCAL1-210ENST00000445153 TJAP1Q5JTD0 557 aa16.64■□□□□ 0.25
SMARCAL1-210ENST00000445153 DEFB128Q7Z7B8 93 aa16.64■□□□□ 0.25
SMARCAL1-210ENST00000445153 PLEKHM2Q8IWE5 1019 aa16.64■□□□□ 0.25
SMARCAL1-210ENST00000445153 SYMPKQ92797 1274 aaKnown RBP16.64■□□□□ 0.25
SMARCAL1-210ENST00000445153 MTIF3Q9H2K0 278 aaKnown RBP16.64■□□□□ 0.25
SMARCAL1-210ENST00000445153 COL20A1Q9P218 1284 aa16.64■□□□□ 0.25
SMARCAL1-210ENST00000445153 SUPT20HL2P0C7V6 817 aa16.63■□□□□ 0.25
SMARCAL1-210ENST00000445153 TXNP10599 105 aaKnown RBP16.63■□□□□ 0.25
SMARCAL1-210ENST00000445153 IGFBP4P22692 258 aa16.63■□□□□ 0.25
SMARCAL1-210ENST00000445153 PPP2R5BQ15173 497 aa16.63■□□□□ 0.25
SMARCAL1-210ENST00000445153 CCDC62Q6P9F0 684 aa16.63■□□□□ 0.25
SMARCAL1-210ENST00000445153 DGKHQ86XP1 1220 aa16.63■□□□□ 0.25
SMARCAL1-210ENST00000445153 DNERQ8NFT8 737 aa16.63■□□□□ 0.25
SMARCAL1-210ENST00000445153 SCFD2Q8WU76 684 aa16.63■□□□□ 0.25
SMARCAL1-210ENST00000445153 TAAR1Q96RJ0 339 aa16.63■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms