RNA–Protein interactions for RNA: ENST00000444878.5

RBM39-216, Transcript of RNA binding motif protein 39, humanhuman

TSL 2

Gene RBM39, Length 2,124 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-216ENST00000444878 GMCL1Q96IK5 515 aa15.39■□□□□ 0.05
RBM39-216ENST00000444878 GMLQ99445 158 aa15.39■□□□□ 0.05
RBM39-216ENST00000444878 TRMT1Q9NXH9 659 aaKnown RBP15.39■□□□□ 0.05
RBM39-216ENST00000444878 ZNF70Q9UC06 446 aaPredicted RBP15.39■□□□□ 0.05
RBM39-216ENST00000444878 LRWD1Q9UFC0 647 aa15.39■□□□□ 0.05
RBM39-216ENST00000444878 PRCPP42785 496 aa15.38■□□□□ 0.05
RBM39-216ENST00000444878 SEMA3FQ13275 785 aa15.38■□□□□ 0.05
RBM39-216ENST00000444878 KMT5BQ4FZB7 885 aa15.38■□□□□ 0.05
RBM39-216ENST00000444878 FILIP1LQ4L180 1135 aa15.38■□□□□ 0.05
RBM39-216ENST00000444878 NIM1KQ8IY84 436 aa15.38■□□□□ 0.05
RBM39-216ENST00000444878 LRRC15Q8TF66 581 aa15.38■□□□□ 0.05
RBM39-216ENST00000444878 NUP88Q99567 741 aaPredicted RBP15.38■□□□□ 0.05
RBM39-216ENST00000444878 MMTAG2Q9BU76 263 aaKnown RBP15.38■□□□□ 0.05
RBM39-216ENST00000444878 VPS33BQ9H267 617 aa15.38■□□□□ 0.05
RBM39-216ENST00000444878 KCND1Q9NSA2 647 aa15.38■□□□□ 0.05
RBM39-216ENST00000444878 MAPK8IP1Q9UQF2 711 aa15.38■□□□□ 0.05
RBM39-216ENST00000444878 COL4A5P29400 1685 aa15.38■□□□□ 0.05
RBM39-216ENST00000444878 KLRC4O43908 158 aa15.38■□□□□ 0.05
RBM39-216ENST00000444878 KCNJ6P48051 423 aa15.38■□□□□ 0.05
RBM39-216ENST00000444878 JAG1P78504 1218 aa15.38■□□□□ 0.05
RBM39-216ENST00000444878 AMPD3Q01432 767 aa15.38■□□□□ 0.05
RBM39-216ENST00000444878 RRP1BQ14684 758 aaKnown RBP15.38■□□□□ 0.05
RBM39-216ENST00000444878 FAM151AQ8WW52 585 aa15.38■□□□□ 0.05
RBM39-216ENST00000444878 CCDC47Q96A33 483 aaKnown RBP15.38■□□□□ 0.05
RBM39-216ENST00000444878 CDK5RAP3Q96JB5 506 aa15.38■□□□□ 0.05
RBM39-216ENST00000444878 DDX25Q9UHL0 483 aaKnown RBP15.38■□□□□ 0.05
RBM39-216ENST00000444878 ZNRF3Q9ULT6 936 aa15.38■□□□□ 0.05
RBM39-216ENST00000444878 SMCHD1A6NHR9 2005 aa15.38■□□□□ 0.05
RBM39-216ENST00000444878 USP17L15C9J2P7 530 aa15.37■□□□□ 0.05
RBM39-216ENST00000444878 USP17L13C9JLJ4 530 aa15.37■□□□□ 0.05
RBM39-216ENST00000444878 USP17L11C9JVI0 530 aa15.37■□□□□ 0.05
RBM39-216ENST00000444878 USP17L18D6R9N7 530 aa15.37■□□□□ 0.05
RBM39-216ENST00000444878 USP17L22D6RA61 530 aa15.37■□□□□ 0.05
RBM39-216ENST00000444878 USP17L17D6RBQ6 530 aa15.37■□□□□ 0.05
RBM39-216ENST00000444878 USP17L19D6RCP7 530 aa15.37■□□□□ 0.05
RBM39-216ENST00000444878 USP17L20D6RJB6 530 aa15.37■□□□□ 0.05
RBM39-216ENST00000444878 MARCH6O60337 910 aa15.37■□□□□ 0.05
RBM39-216ENST00000444878 COBLO75128 1261 aa15.37■□□□□ 0.05
RBM39-216ENST00000444878 RHOBTB3O94955 611 aa15.37■□□□□ 0.05
RBM39-216ENST00000444878 BMP3P12645 472 aa15.37■□□□□ 0.05
RBM39-216ENST00000444878 GCFC2P16383 781 aaKnown RBP15.37■□□□□ 0.05
RBM39-216ENST00000444878 USP17L24Q0WX57 530 aa15.37■□□□□ 0.05
RBM39-216ENST00000444878 TBX2Q13207 712 aaPredicted RBP15.37■□□□□ 0.05
RBM39-216ENST00000444878 STIM1Q13586 685 aa15.37■□□□□ 0.05
RBM39-216ENST00000444878 PDIA5Q14554 519 aa15.37■□□□□ 0.05
RBM39-216ENST00000444878 PTPN14Q15678 1187 aa15.37■□□□□ 0.05
RBM39-216ENST00000444878 USP17L6PQ6QN14 398 aa15.37■□□□□ 0.05
RBM39-216ENST00000444878 APTXQ7Z2E3 356 aaKnown RBP15.37■□□□□ 0.05
RBM39-216ENST00000444878 NAP1L4Q99733 375 aaKnown RBP15.37■□□□□ 0.05
RBM39-216ENST00000444878 AMNQ9BXJ7 453 aa15.37■□□□□ 0.05
RBM39-216ENST00000444878 VEZTQ9HBM0 779 aa15.37■□□□□ 0.05
RBM39-216ENST00000444878 ATF5Q9Y2D1 282 aaPredicted RBP15.37■□□□□ 0.05
RBM39-216ENST00000444878 GOLGA8FQ08AF8 430 aa15.37■□□□□ 0.05
RBM39-216ENST00000444878 GOLGA8DPQ0D2H9 430 aa15.37■□□□□ 0.05
RBM39-216ENST00000444878 SPDYE2Q495Y8 402 aa15.37■□□□□ 0.05
RBM39-216ENST00000444878 SYDE2Q5VT97 1194 aa15.37■□□□□ 0.05
RBM39-216ENST00000444878 E4F1Q66K89 784 aaPredicted RBP15.37■□□□□ 0.05
RBM39-216ENST00000444878 ADSSL1Q8N142 457 aa15.37■□□□□ 0.05
RBM39-216ENST00000444878 ANKRD20A12PQ8NF67 263 aa15.37■□□□□ 0.05
RBM39-216ENST00000444878 TRIM9Q9C026 710 aa15.37■□□□□ 0.05
RBM39-216ENST00000444878 ADD3Q9UEY8 706 aaKnown RBP15.37■□□□□ 0.05
RBM39-216ENST00000444878 POTEMA6NI47 508 aa15.36■□□□□ 0.05
RBM39-216ENST00000444878 ASIC1P78348 528 aa15.36■□□□□ 0.05
RBM39-216ENST00000444878 SPAG1Q07617 926 aa15.36■□□□□ 0.05
RBM39-216ENST00000444878 KRT79Q5XKE5 535 aa15.36■□□□□ 0.05
RBM39-216ENST00000444878 AGBL3Q8NEM8 1001 aa15.36■□□□□ 0.05
RBM39-216ENST00000444878 C7orf25Q9BPX7 421 aa15.36■□□□□ 0.05
RBM39-216ENST00000444878 TMX1Q9H3N1 280 aa15.36■□□□□ 0.05
RBM39-216ENST00000444878 ARHGEF10LQ9HCE6 1279 aa15.36■□□□□ 0.05
RBM39-216ENST00000444878 PIM2Q9P1W9 311 aa15.36■□□□□ 0.05
RBM39-216ENST00000444878 SYNPO2Q9UMS6 1093 aa15.36■□□□□ 0.05
RBM39-216ENST00000444878 A0A1W2PRG0 241 aa15.35■□□□□ 0.05
RBM39-216ENST00000444878 PSDA5PKW4 1024 aaPredicted RBP15.35■□□□□ 0.05
RBM39-216ENST00000444878 DYNC1I1O14576 645 aa15.35■□□□□ 0.05
RBM39-216ENST00000444878 PSMA7O14818 248 aa15.35■□□□□ 0.05
RBM39-216ENST00000444878 TEX33O43247 280 aa15.35■□□□□ 0.05
RBM39-216ENST00000444878 SNAP25P60880 206 aa15.35■□□□□ 0.05
RBM39-216ENST00000444878 CEP135Q66GS9 1140 aa15.35■□□□□ 0.05
RBM39-216ENST00000444878 NYAP1Q6ZVC0 841 aa15.35■□□□□ 0.05
RBM39-216ENST00000444878 SV2BQ7L1I2 683 aa15.35■□□□□ 0.05
RBM39-216ENST00000444878 FBXO11Q86XK2 927 aa15.35■□□□□ 0.05
RBM39-216ENST00000444878 GIMAP8Q8ND71 665 aaPredicted RBP15.35■□□□□ 0.05
RBM39-216ENST00000444878 ANO3Q9BYT9 981 aa15.35■□□□□ 0.05
RBM39-216ENST00000444878 STK17AQ9UEE5 414 aa15.35■□□□□ 0.05
RBM39-216ENST00000444878 H7C1D1 291 aa15.35■□□□□ 0.05
RBM39-216ENST00000444878 PDE4DQ08499 809 aa15.35■□□□□ 0.05
RBM39-216ENST00000444878 GRB10Q13322 594 aa15.35■□□□□ 0.05
RBM39-216ENST00000444878 USH1GQ495M9 461 aa15.35■□□□□ 0.05
RBM39-216ENST00000444878 CREBRFQ8IUR6 639 aa15.35■□□□□ 0.05
RBM39-216ENST00000444878 SPICE1Q8N0Z3 855 aa15.35■□□□□ 0.05
RBM39-216ENST00000444878 SNX29Q8TEQ0 813 aa15.35■□□□□ 0.05
RBM39-216ENST00000444878 EXOC1Q9NV70 894 aa15.35■□□□□ 0.05
RBM39-216ENST00000444878 PAXBP1Q9Y5B6 917 aa15.35■□□□□ 0.05
RBM39-216ENST00000444878 CNTNAP1P78357 1384 aa15.34■□□□□ 0.05
RBM39-216ENST00000444878 RIOK3O14730 519 aaKnown RBP15.34■□□□□ 0.05
RBM39-216ENST00000444878 USP11P51784 963 aa15.34■□□□□ 0.05
RBM39-216ENST00000444878 ADKP55263 362 aaKnown RBP15.34■□□□□ 0.05
RBM39-216ENST00000444878 AP3B2Q13367 1082 aa15.34■□□□□ 0.05
RBM39-216ENST00000444878 KRT31Q15323 416 aa15.34■□□□□ 0.05
RBM39-216ENST00000444878 FKBP1CQ5VVH2 108 aa15.34■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms