RNA–Protein interactions for RNA: ENST00000444621.1

HLA-F-221, Transcript of major histocompatibility complex, class I, F, humanhuman

Gene HLA-F, Length 495 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-F-221ENST00000444621 LSG1Q9H089 658 aaKnown RBP12.9□□□□□ -0.34
HLA-F-221ENST00000444621 A1CFQ9NQ94 594 aaKnown RBP12.9□□□□□ -0.34
HLA-F-221ENST00000444621 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.9□□□□□ -0.34
HLA-F-221ENST00000444621 MRPL11Q9Y3B7 192 aaKnown RBP12.9□□□□□ -0.34
HLA-F-221ENST00000444621 ABCB11O95342 1321 aa12.89□□□□□ -0.35
HLA-F-221ENST00000444621 KLRF2D3W0D1 207 aa12.89□□□□□ -0.35
HLA-F-221ENST00000444621 SLC27A2O14975 620 aa12.89□□□□□ -0.35
HLA-F-221ENST00000444621 DNAJB2P25686 324 aa12.89□□□□□ -0.35
HLA-F-221ENST00000444621 KIF5BP33176 963 aa12.89□□□□□ -0.35
HLA-F-221ENST00000444621 KRT32Q14532 448 aa12.89□□□□□ -0.35
HLA-F-221ENST00000444621 SEC23AQ15436 765 aa12.89□□□□□ -0.35
HLA-F-221ENST00000444621 CDC37Q16543 378 aaPredicted RBP12.89□□□□□ -0.35
HLA-F-221ENST00000444621 USH1GQ495M9 461 aa12.89□□□□□ -0.35
HLA-F-221ENST00000444621 CREB3L3Q68CJ9 461 aa12.89□□□□□ -0.35
HLA-F-221ENST00000444621 RASGRP2Q7LDG7 609 aa12.89□□□□□ -0.35
HLA-F-221ENST00000444621 FBXO11Q86XK2 927 aa12.89□□□□□ -0.35
HLA-F-221ENST00000444621 CCDC144CPQ8IYA2 1237 aa12.89□□□□□ -0.35
HLA-F-221ENST00000444621 ADGRF4Q8IZF3 695 aa12.89□□□□□ -0.35
HLA-F-221ENST00000444621 FAM133AQ8N9E0 248 aa12.89□□□□□ -0.35
HLA-F-221ENST00000444621 CTCFLQ8NI51 663 aaPredicted RBP12.89□□□□□ -0.35
HLA-F-221ENST00000444621 PPM1EQ8WY54 764 aa12.89□□□□□ -0.35
HLA-F-221ENST00000444621 TMEM87BQ96K49 555 aa12.89□□□□□ -0.35
HLA-F-221ENST00000444621 CYP39A1Q9NYL5 469 aa12.89□□□□□ -0.35
HLA-F-221ENST00000444621 SMCHD1A6NHR9 2005 aa12.88□□□□□ -0.35
HLA-F-221ENST00000444621 SNAI1O95863 264 aaPredicted RBP12.88□□□□□ -0.35
HLA-F-221ENST00000444621 ZNF865P0CJ78 1059 aaPredicted RBP12.88□□□□□ -0.35
HLA-F-221ENST00000444621 CALM1P0DP23 149 aa12.88□□□□□ -0.35
HLA-F-221ENST00000444621 CALM2P0DP24 149 aa12.88□□□□□ -0.35
HLA-F-221ENST00000444621 CALM3P0DP25 149 aa12.88□□□□□ -0.35
HLA-F-221ENST00000444621 CALML3P27482 149 aa12.88□□□□□ -0.35
HLA-F-221ENST00000444621 GNAQP50148 359 aa12.88□□□□□ -0.35
HLA-F-221ENST00000444621 CNTN2Q02246 1040 aa12.88□□□□□ -0.35
HLA-F-221ENST00000444621 BAATQ14032 418 aaPredicted RBP12.88□□□□□ -0.35
HLA-F-221ENST00000444621 LRRC41Q15345 812 aa12.88□□□□□ -0.35
HLA-F-221ENST00000444621 MUM1L1Q5H9M0 696 aa12.88□□□□□ -0.35
HLA-F-221ENST00000444621 CHST3Q7LGC8 479 aa12.88□□□□□ -0.35
HLA-F-221ENST00000444621 PCSK9Q8NBP7 692 aaKnown RBP12.88□□□□□ -0.35
HLA-F-221ENST00000444621 RGS22Q8NE09 1264 aa12.88□□□□□ -0.35
HLA-F-221ENST00000444621 ADAMTS19Q8TE59 1207 aa12.88□□□□□ -0.35
HLA-F-221ENST00000444621 NUP133Q8WUM0 1156 aa12.88□□□□□ -0.35
HLA-F-221ENST00000444621 ATXN2LQ8WWM7 1075 aaKnown RBP12.88□□□□□ -0.35
HLA-F-221ENST00000444621 LZTS2Q9BRK4 669 aa12.88□□□□□ -0.35
HLA-F-221ENST00000444621 AMNQ9BXJ7 453 aa12.88□□□□□ -0.35
HLA-F-221ENST00000444621 ZNF576Q9H609 170 aa12.88□□□□□ -0.35
HLA-F-221ENST00000444621 HSFX4A0A1B0GTS1 333 aaPredicted RBP12.87□□□□□ -0.35
HLA-F-221ENST00000444621 HSFX3A0A1B0GWH4 333 aaPredicted RBP12.87□□□□□ -0.35
HLA-F-221ENST00000444621 PRC1O43663 620 aa12.87□□□□□ -0.35
HLA-F-221ENST00000444621 ZEB2O60315 1214 aa12.87□□□□□ -0.35
HLA-F-221ENST00000444621 DUSP11O75319 330 aaKnown RBP12.87□□□□□ -0.35
HLA-F-221ENST00000444621 REC8O95072 547 aa12.87□□□□□ -0.35
HLA-F-221ENST00000444621 HMGB1P09429 215 aaKnown RBP12.87□□□□□ -0.35
HLA-F-221ENST00000444621 CLTBP09497 229 aa12.87□□□□□ -0.35
HLA-F-221ENST00000444621 TAL1P17542 331 aaPredicted RBP12.87□□□□□ -0.35
HLA-F-221ENST00000444621 FGD1P98174 961 aa12.87□□□□□ -0.35
HLA-F-221ENST00000444621 TNFAIP2Q03169 654 aa12.87□□□□□ -0.35
HLA-F-221ENST00000444621 PDE4DQ08499 809 aa12.87□□□□□ -0.35
HLA-F-221ENST00000444621 NECTIN1Q15223 517 aa12.87□□□□□ -0.35
HLA-F-221ENST00000444621 CCDC144BQ3MJ40 725 aa12.87□□□□□ -0.35
HLA-F-221ENST00000444621 C1orf53Q5VUE5 145 aa12.87□□□□□ -0.35
HLA-F-221ENST00000444621 IQSEC1Q6DN90 963 aa12.87□□□□□ -0.35
HLA-F-221ENST00000444621 DNERQ8NFT8 737 aa12.87□□□□□ -0.35
HLA-F-221ENST00000444621 VTI1AQ96AJ9 217 aa12.87□□□□□ -0.35
HLA-F-221ENST00000444621 TIFAQ96CG3 184 aa12.87□□□□□ -0.35
HLA-F-221ENST00000444621 ASB2Q96Q27 587 aa12.87□□□□□ -0.35
HLA-F-221ENST00000444621 MAP3K14Q99558 947 aa12.87□□□□□ -0.35
HLA-F-221ENST00000444621 TSEN34Q9BSV6 310 aaKnown RBP12.87□□□□□ -0.35
HLA-F-221ENST00000444621 AP5M1Q9H0R1 490 aa12.87□□□□□ -0.35
HLA-F-221ENST00000444621 JMJD4Q9H9V9 463 aa12.87□□□□□ -0.35
HLA-F-221ENST00000444621 MYH6P13533 1939 aa12.86□□□□□ -0.35
HLA-F-221ENST00000444621 MYO9BQ13459 2157 aa12.86□□□□□ -0.35
HLA-F-221ENST00000444621 PALM3A6NDB9 673 aaPredicted RBP12.86□□□□□ -0.35
HLA-F-221ENST00000444621 SOWAHBA6NEL2 793 aa12.86□□□□□ -0.35
HLA-F-221ENST00000444621 ZBTB5O15062 677 aa12.86□□□□□ -0.35
HLA-F-221ENST00000444621 KIAA0355O15063 1070 aa12.86□□□□□ -0.35
HLA-F-221ENST00000444621 EIF5BO60841 1220 aaKnown RBP12.86□□□□□ -0.35
HLA-F-221ENST00000444621 DDAH1O94760 285 aa12.86□□□□□ -0.35
HLA-F-221ENST00000444621 C6orf222P0C671 652 aaPredicted RBP12.86□□□□□ -0.35
HLA-F-221ENST00000444621 FPGSQ05932 587 aa12.86□□□□□ -0.35
HLA-F-221ENST00000444621 GRM4Q14833 912 aa12.86□□□□□ -0.35
HLA-F-221ENST00000444621 QRICH1Q2TAL8 776 aa12.86□□□□□ -0.35
HLA-F-221ENST00000444621 MB21D2Q8IYB1 491 aaPredicted RBP12.86□□□□□ -0.35
HLA-F-221ENST00000444621 SAMD3Q8N6K7 520 aa12.86□□□□□ -0.35
HLA-F-221ENST00000444621 IGDCC4Q8TDY8 1250 aa12.86□□□□□ -0.35
HLA-F-221ENST00000444621 NEK1Q96PY6 1258 aa12.86□□□□□ -0.35
HLA-F-221ENST00000444621 VTA1Q9NP79 307 aa12.86□□□□□ -0.35
HLA-F-221ENST00000444621 THEGQ9P2T0 379 aa12.86□□□□□ -0.35
HLA-F-221ENST00000444621 MAD2L2Q9UI95 211 aa12.86□□□□□ -0.35
HLA-F-221ENST00000444621 SLC12A7Q9Y666 1083 aa12.86□□□□□ -0.35
HLA-F-221ENST00000444621 TCF20Q9UGU0 1960 aaKnown RBP12.86□□□□□ -0.35
HLA-F-221ENST00000444621 MOXD2PA6NHM9 499 aa12.85□□□□□ -0.35
HLA-F-221ENST00000444621 NFIBO00712 420 aa12.85□□□□□ -0.35
HLA-F-221ENST00000444621 PGK1P00558 417 aa12.85□□□□□ -0.35
HLA-F-221ENST00000444621 RAG1P15918 1043 aa12.85□□□□□ -0.35
HLA-F-221ENST00000444621 LIFRP42702 1097 aa12.85□□□□□ -0.35
HLA-F-221ENST00000444621 ALDH5A1P51649 535 aaPredicted RBP12.85□□□□□ -0.35
HLA-F-221ENST00000444621 RPS6P62753 249 aaKnown RBP12.85□□□□□ -0.35
HLA-F-221ENST00000444621 BRDTQ58F21 947 aaPredicted RBP12.85□□□□□ -0.35
HLA-F-221ENST00000444621 STOX1Q6ZVD7 989 aa12.85□□□□□ -0.35
HLA-F-221ENST00000444621 SKAP1Q86WV1 359 aa12.85□□□□□ -0.35
HLA-F-221ENST00000444621 ZNF654Q8IZM8 581 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms