RNA–Protein interactions for RNA: ENST00000443206.2

TOM1-208, Transcript of target of myb1 membrane trafficking protein, humanhuman

TSL 4

Gene TOM1, Length 567 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOM1-208ENST00000443206 KRT32Q14532 448 aa15.24■□□□□ 0.03
TOM1-208ENST00000443206 HABP4Q5JVS0 413 aaKnown RBP15.24■□□□□ 0.03
TOM1-208ENST00000443206 HOMER1Q86YM7 354 aa15.24■□□□□ 0.03
TOM1-208ENST00000443206 FBXO16Q8IX29 292 aaPredicted RBP15.24■□□□□ 0.03
TOM1-208ENST00000443206 ZNF654Q8IZM8 581 aa15.24■□□□□ 0.03
TOM1-208ENST00000443206 PCSK9Q8NBP7 692 aaKnown RBP15.24■□□□□ 0.03
TOM1-208ENST00000443206 MORC4Q8TE76 937 aa15.24■□□□□ 0.03
TOM1-208ENST00000443206 MTMR8Q96EF0 704 aa15.24■□□□□ 0.03
TOM1-208ENST00000443206 RIOX1Q9H6W3 641 aa15.24■□□□□ 0.03
TOM1-208ENST00000443206 PHF24Q9UPV7 400 aa15.24■□□□□ 0.03
TOM1-208ENST00000443206 PCDHA1Q9Y5I3 950 aa15.24■□□□□ 0.03
TOM1-208ENST00000443206 MOXD2PA6NHM9 499 aa15.23■□□□□ 0.03
TOM1-208ENST00000443206 SH2B2O14492 632 aaPredicted RBP15.23■□□□□ 0.03
TOM1-208ENST00000443206 CALM1P0DP23 149 aa15.23■□□□□ 0.03
TOM1-208ENST00000443206 CALM2P0DP24 149 aa15.23■□□□□ 0.03
TOM1-208ENST00000443206 CALM3P0DP25 149 aa15.23■□□□□ 0.03
TOM1-208ENST00000443206 SYN1P17600 705 aa15.23■□□□□ 0.03
TOM1-208ENST00000443206 GNAQP50148 359 aa15.23■□□□□ 0.03
TOM1-208ENST00000443206 GJA9P57773 515 aa15.23■□□□□ 0.03
TOM1-208ENST00000443206 RTP1P59025 263 aa15.23■□□□□ 0.03
TOM1-208ENST00000443206 KCNA10Q16322 511 aa15.23■□□□□ 0.03
TOM1-208ENST00000443206 TSGA10IPQ3SY00 556 aa15.23■□□□□ 0.03
TOM1-208ENST00000443206 GNASQ5JWF2 1037 aa15.23■□□□□ 0.03
TOM1-208ENST00000443206 TAPT1Q6NXT6 567 aa15.23■□□□□ 0.03
TOM1-208ENST00000443206 KLHDC9Q8NEP7 349 aa15.23■□□□□ 0.03
TOM1-208ENST00000443206 TBC1D5Q92609 795 aa15.23■□□□□ 0.03
TOM1-208ENST00000443206 PIGSQ96S52 555 aa15.23■□□□□ 0.03
TOM1-208ENST00000443206 AP5M1Q9H0R1 490 aa15.23■□□□□ 0.03
TOM1-208ENST00000443206 UPF3AQ9H1J1 476 aaKnown RBP15.23■□□□□ 0.03
TOM1-208ENST00000443206 GPHNQ9NQX3 736 aaPredicted RBP15.23■□□□□ 0.03
TOM1-208ENST00000443206 PDGFCQ9NRA1 345 aa15.23■□□□□ 0.03
TOM1-208ENST00000443206 PRKAG2Q9UGJ0 569 aa15.23■□□□□ 0.03
TOM1-208ENST00000443206 ATP11BQ9Y2G3 1177 aa15.23■□□□□ 0.03
TOM1-208ENST00000443206 DDX49Q9Y6V7 483 aaKnown RBP15.23■□□□□ 0.03
TOM1-208ENST00000443206 PNMA6FA0A0J9YX94 578 aa15.22■□□□□ 0.03
TOM1-208ENST00000443206 C11orf97A0A1B0GVM6 126 aaPredicted RBP15.22■□□□□ 0.03
TOM1-208ENST00000443206 A0A1W2PQ45 241 aaPredicted RBP15.22■□□□□ 0.03
TOM1-208ENST00000443206 A0A1W2PQY0 241 aa15.22■□□□□ 0.03
TOM1-208ENST00000443206 ADCY6O43306 1168 aa15.22■□□□□ 0.03
TOM1-208ENST00000443206 REC8O95072 547 aa15.22■□□□□ 0.03
TOM1-208ENST00000443206 CFBP00751 764 aa15.22■□□□□ 0.03
TOM1-208ENST00000443206 CST5P28325 142 aaPredicted RBP15.22■□□□□ 0.03
TOM1-208ENST00000443206 ACLYP53396 1101 aa15.22■□□□□ 0.03
TOM1-208ENST00000443206 C1orf53Q5VUE5 145 aa15.22■□□□□ 0.03
TOM1-208ENST00000443206 SYNE3Q6ZMZ3 975 aa15.22■□□□□ 0.03
TOM1-208ENST00000443206 SAMD3Q8N6K7 520 aa15.22■□□□□ 0.03
TOM1-208ENST00000443206 VTI1AQ96AJ9 217 aa15.22■□□□□ 0.03
TOM1-208ENST00000443206 LZTS2Q9BRK4 669 aa15.22■□□□□ 0.03
TOM1-208ENST00000443206 MYL10Q9BUA6 226 aa15.22■□□□□ 0.03
TOM1-208ENST00000443206 LRRC2Q9BYS8 371 aa15.22■□□□□ 0.03
TOM1-208ENST00000443206 STARD7Q9NQZ5 370 aa15.22■□□□□ 0.03
TOM1-208ENST00000443206 MAP3K20Q9NYL2 800 aaKnown RBP15.22■□□□□ 0.03
TOM1-208ENST00000443206 GNEQ9Y223 722 aaKnown RBP15.22■□□□□ 0.03
TOM1-208ENST00000443206 Q9Y3F1 56 aa15.22■□□□□ 0.03
TOM1-208ENST00000443206 SLC12A7Q9Y666 1083 aa15.22■□□□□ 0.03
TOM1-208ENST00000443206 LRRC37A2A6NM11 1700 aa15.21■□□□□ 0.03
TOM1-208ENST00000443206 DYNC1LI2O43237 492 aaPredicted RBP15.21■□□□□ 0.03
TOM1-208ENST00000443206 CYTH3O43739 400 aa15.21■□□□□ 0.03
TOM1-208ENST00000443206 HMGB1P09429 215 aaKnown RBP15.21■□□□□ 0.03
TOM1-208ENST00000443206 SMPD1P17405 629 aa15.21■□□□□ 0.03
TOM1-208ENST00000443206 SMARCA1P28370 1054 aa15.21■□□□□ 0.03
TOM1-208ENST00000443206 SNX17Q15036 470 aa15.21■□□□□ 0.03
TOM1-208ENST00000443206 DHX32Q7L7V1 743 aaKnown RBP15.21■□□□□ 0.03
TOM1-208ENST00000443206 TLK2Q86UE8 772 aa15.21■□□□□ 0.03
TOM1-208ENST00000443206 RASEFQ8IZ41 740 aa15.21■□□□□ 0.03
TOM1-208ENST00000443206 SYTL5Q8TDW5 730 aaPredicted RBP15.21■□□□□ 0.03
TOM1-208ENST00000443206 NSUN6Q8TEA1 469 aaKnown RBP15.21■□□□□ 0.03
TOM1-208ENST00000443206 GLT1D1Q96MS3 346 aa15.21■□□□□ 0.03
TOM1-208ENST00000443206 WDR11Q9BZH6 1224 aa15.21■□□□□ 0.03
TOM1-208ENST00000443206 RBM27Q9P2N5 1060 aaKnown RBP15.21■□□□□ 0.03
TOM1-208ENST00000443206 MYADML2A6NDP7 307 aa15.2■□□□□ 0.02
TOM1-208ENST00000443206 ZEB2O60315 1214 aa15.2■□□□□ 0.02
TOM1-208ENST00000443206 PPP1R11O60927 126 aaPredicted RBP15.2■□□□□ 0.02
TOM1-208ENST00000443206 ASGR1P07306 291 aa15.2■□□□□ 0.02
TOM1-208ENST00000443206 EDNRBP24530 442 aa15.2■□□□□ 0.02
TOM1-208ENST00000443206 NKX3-2P78367 333 aa15.2■□□□□ 0.02
TOM1-208ENST00000443206 EXOSC10Q01780 885 aaKnown RBP15.2■□□□□ 0.02
TOM1-208ENST00000443206 COL9A3Q14050 684 aaPredicted RBP15.2■□□□□ 0.02
TOM1-208ENST00000443206 SLC35G1Q2M3R5 365 aa15.2■□□□□ 0.02
TOM1-208ENST00000443206 TRIM60Q495X7 471 aa15.2■□□□□ 0.02
TOM1-208ENST00000443206 DUSP28Q4G0W2 176 aa15.2■□□□□ 0.02
TOM1-208ENST00000443206 ARHGEF16Q5VV41 709 aa15.2■□□□□ 0.02
TOM1-208ENST00000443206 CCSAPQ6IQ19 270 aaPredicted RBP15.2■□□□□ 0.02
TOM1-208ENST00000443206 PIBF1Q8WXW3 757 aa15.2■□□□□ 0.02
TOM1-208ENST00000443206 RRP36Q96EU6 259 aaKnown RBP15.2■□□□□ 0.02
TOM1-208ENST00000443206 TAAR1Q96RJ0 339 aa15.2■□□□□ 0.02
TOM1-208ENST00000443206 IWS1Q96ST2 819 aa15.2■□□□□ 0.02
TOM1-208ENST00000443206 RMDN3Q96TC7 470 aa15.2■□□□□ 0.02
TOM1-208ENST00000443206 SPZ1Q9BXG8 430 aa15.2■□□□□ 0.02
TOM1-208ENST00000443206 SEC63Q9UGP8 760 aaKnown RBP15.2■□□□□ 0.02
TOM1-208ENST00000443206 ELP1O95163 1332 aa15.19■□□□□ 0.02
TOM1-208ENST00000443206 KIAA1217Q5T5P2 1943 aa15.19■□□□□ 0.02
TOM1-208ENST00000443206 RBM47A0AV96 593 aaKnown RBP15.19■□□□□ 0.02
TOM1-208ENST00000443206 IRX5P78411 483 aaPredicted RBP15.19■□□□□ 0.02
TOM1-208ENST00000443206 FGD1P98174 961 aa15.19■□□□□ 0.02
TOM1-208ENST00000443206 BEX3Q00994 111 aa15.19■□□□□ 0.02
TOM1-208ENST00000443206 STXBP2Q15833 593 aa15.19■□□□□ 0.02
TOM1-208ENST00000443206 FSCN1Q16658 493 aaKnown RBP15.19■□□□□ 0.02
TOM1-208ENST00000443206 ADCK5Q3MIX3 580 aa15.19■□□□□ 0.02
TOM1-208ENST00000443206 SGMS1Q86VZ5 419 aa15.19■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 69.5 ms