RNA–Protein interactions for RNA: ENST00000442216.1

CSNK1E-210, Transcript of casein kinase 1 epsilon, humanhuman

TSL 2

Gene CSNK1E, Length 787 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-210ENST00000442216 TRPV1Q8NER1 839 aa17.41■□□□□ 0.38
CSNK1E-210ENST00000442216 DNERQ8NFT8 737 aa17.41■□□□□ 0.38
CSNK1E-210ENST00000442216 MORC4Q8TE76 937 aa17.41■□□□□ 0.38
CSNK1E-210ENST00000442216 ABHD16BQ9H3Z7 469 aa17.41■□□□□ 0.38
CSNK1E-210ENST00000442216 SEC63Q9UGP8 760 aaKnown RBP17.41■□□□□ 0.38
CSNK1E-210ENST00000442216 LRRC37A2A6NM11 1700 aa17.41■□□□□ 0.38
CSNK1E-210ENST00000442216 SNAI1O95863 264 aaPredicted RBP17.4■□□□□ 0.38
CSNK1E-210ENST00000442216 METAP2P50579 478 aaKnown RBP eCLIP17.4■□□□□ 0.389e-7■■■■■ 27
CSNK1E-210ENST00000442216 ARMCX2Q7L311 632 aa17.4■□□□□ 0.38
CSNK1E-210ENST00000442216 RAB11FIP4Q86YS3 637 aa17.4■□□□□ 0.38
CSNK1E-210ENST00000442216 ANKLE1Q8NAG6 615 aa17.4■□□□□ 0.38
CSNK1E-210ENST00000442216 SHISA4Q96DD7 197 aa17.4■□□□□ 0.38
CSNK1E-210ENST00000442216 MPHOSPH6Q99547 160 aaKnown RBP17.4■□□□□ 0.38
CSNK1E-210ENST00000442216 UPF3BQ9BZI7 483 aaKnown RBP17.4■□□□□ 0.38
CSNK1E-210ENST00000442216 FAM217BQ9NTX9 383 aaPredicted RBP17.4■□□□□ 0.38
CSNK1E-210ENST00000442216 PDRG1Q9NUG6 133 aa17.4■□□□□ 0.38
CSNK1E-210ENST00000442216 CDKN2AIPQ9NXV6 580 aaPredicted RBP17.4■□□□□ 0.38
CSNK1E-210ENST00000442216 DDX20Q9UHI6 824 aaKnown RBP17.4■□□□□ 0.38
CSNK1E-210ENST00000442216 OGDHLQ9ULD0 1010 aa17.4■□□□□ 0.38
CSNK1E-210ENST00000442216 B4DLN1 442 aa17.39■□□□□ 0.37
CSNK1E-210ENST00000442216 ZNF865P0CJ78 1059 aaPredicted RBP17.39■□□□□ 0.37
CSNK1E-210ENST00000442216 CNGA1P29973 690 aa17.39■□□□□ 0.37
CSNK1E-210ENST00000442216 HSD17B4P51659 736 aa17.39■□□□□ 0.37
CSNK1E-210ENST00000442216 MRPL12P52815 198 aaKnown RBP17.39■□□□□ 0.37
CSNK1E-210ENST00000442216 LHX8Q68G74 356 aa17.39■□□□□ 0.37
CSNK1E-210ENST00000442216 SLC30A10Q6XR72 485 aa17.39■□□□□ 0.37
CSNK1E-210ENST00000442216 ZNF274Q96GC6 653 aaPredicted RBP17.39■□□□□ 0.37
CSNK1E-210ENST00000442216 CNTNAP5Q8WYK1 1306 aa17.39■□□□□ 0.37
CSNK1E-210ENST00000442216 OPLAHO14841 1288 aa17.38■□□□□ 0.37
CSNK1E-210ENST00000442216 TFRCP02786 760 aaKnown RBP17.38■□□□□ 0.37
CSNK1E-210ENST00000442216 CALML3P27482 149 aa17.38■□□□□ 0.37
CSNK1E-210ENST00000442216 CDC27P30260 824 aa17.38■□□□□ 0.37
CSNK1E-210ENST00000442216 ALDH5A1P51649 535 aaPredicted RBP17.38■□□□□ 0.37
CSNK1E-210ENST00000442216 FUT2Q10981 343 aa17.38■□□□□ 0.37
CSNK1E-210ENST00000442216 ANKRD1Q15327 319 aa17.38■□□□□ 0.37
CSNK1E-210ENST00000442216 PRAMEF19Q5SWL8 479 aa17.38■□□□□ 0.37
CSNK1E-210ENST00000442216 CMTR1Q8N1G2 835 aaKnown RBP17.38■□□□□ 0.37
CSNK1E-210ENST00000442216 NAP1L2Q9ULW6 460 aaPredicted RBP17.38■□□□□ 0.37
CSNK1E-210ENST00000442216 KIAA1217Q5T5P2 1943 aa17.38■□□□□ 0.37
CSNK1E-210ENST00000442216 ASTN1O14525 1302 aa17.38■□□□□ 0.37
CSNK1E-210ENST00000442216 hCG_1984214I3L0E3 225 aa17.37■□□□□ 0.37
CSNK1E-210ENST00000442216 CFBP00751 764 aa17.37■□□□□ 0.37
CSNK1E-210ENST00000442216 AKR1A1P14550 325 aa17.37■□□□□ 0.37
CSNK1E-210ENST00000442216 PDIA3P30101 505 aaKnown RBP17.37■□□□□ 0.37
CSNK1E-210ENST00000442216 ACVR2BQ13705 512 aa17.37■□□□□ 0.37
CSNK1E-210ENST00000442216 TEX2Q8IWB9 1127 aa17.37■□□□□ 0.37
CSNK1E-210ENST00000442216 CCDC82Q8N4S0 544 aa17.37■□□□□ 0.37
CSNK1E-210ENST00000442216 ZNF713Q8N859 430 aaPredicted RBP17.37■□□□□ 0.37
CSNK1E-210ENST00000442216 SYTL5Q8TDW5 730 aaPredicted RBP17.37■□□□□ 0.37
CSNK1E-210ENST00000442216 TBC1D5Q92609 795 aa17.37■□□□□ 0.37
CSNK1E-210ENST00000442216 RBM27Q9P2N5 1060 aaKnown RBP17.37■□□□□ 0.37
CSNK1E-210ENST00000442216 EDNRBP24530 442 aa17.36■□□□□ 0.37
CSNK1E-210ENST00000442216 ADD1P35611 737 aaKnown RBP17.36■□□□□ 0.37
CSNK1E-210ENST00000442216 MLLT1Q03111 559 aaPredicted RBP17.36■□□□□ 0.37
CSNK1E-210ENST00000442216 UBE2Q1Q7Z7E8 422 aa17.36■□□□□ 0.37
CSNK1E-210ENST00000442216 NSUN6Q8TEA1 469 aaKnown RBP17.36■□□□□ 0.37
CSNK1E-210ENST00000442216 PIBF1Q8WXW3 757 aa17.36■□□□□ 0.37
CSNK1E-210ENST00000442216 KATNBL1Q9H079 304 aa17.36■□□□□ 0.37
CSNK1E-210ENST00000442216 VTA1Q9NP79 307 aa17.36■□□□□ 0.37
CSNK1E-210ENST00000442216 FAM184BQ9ULE4 1060 aa17.36■□□□□ 0.37
CSNK1E-210ENST00000442216 GCOM1H8Y6P7 765 aaPredicted RBP17.35■□□□□ 0.37
CSNK1E-210ENST00000442216 POLR2MP0CAP2 368 aa17.35■□□□□ 0.37
CSNK1E-210ENST00000442216 RBM25P49756 843 aaKnown RBP17.35■□□□□ 0.37
CSNK1E-210ENST00000442216 PURBQ96QR8 312 aaKnown RBP17.35■□□□□ 0.37
CSNK1E-210ENST00000442216 IWS1Q96ST2 819 aa17.35■□□□□ 0.37
CSNK1E-210ENST00000442216 ZHX1Q9UKY1 873 aaPredicted RBP17.35■□□□□ 0.37
CSNK1E-210ENST00000442216 PIK3CDO00329 1044 aa17.34■□□□□ 0.37
CSNK1E-210ENST00000442216 FARP2O94887 1054 aaPredicted RBP17.34■□□□□ 0.37
CSNK1E-210ENST00000442216 RARBP10826 455 aa17.34■□□□□ 0.37
CSNK1E-210ENST00000442216 IFNAR1P17181 557 aa17.34■□□□□ 0.37
CSNK1E-210ENST00000442216 NTRK3Q16288 839 aa17.34■□□□□ 0.37
CSNK1E-210ENST00000442216 ARRDC4Q8NCT1 418 aa17.34■□□□□ 0.37
CSNK1E-210ENST00000442216 IL27Q8NEV9 243 aa17.34■□□□□ 0.37
CSNK1E-210ENST00000442216 TAAR1Q96RJ0 339 aa17.34■□□□□ 0.37
CSNK1E-210ENST00000442216 RMDN3Q96TC7 470 aa17.34■□□□□ 0.37
CSNK1E-210ENST00000442216 C22orf23Q9BZE7 217 aa17.34■□□□□ 0.37
CSNK1E-210ENST00000442216 UPF2Q9HAU5 1272 aaKnown RBP17.34■□□□□ 0.37
CSNK1E-210ENST00000442216 COL20A1Q9P218 1284 aa17.34■□□□□ 0.37
CSNK1E-210ENST00000442216 V9GY48 417 aaPredicted RBP17.34■□□□□ 0.37
CSNK1E-210ENST00000442216 PRPF3O43395 683 aaKnown RBP17.33■□□□□ 0.36
CSNK1E-210ENST00000442216 DUSP11O75319 330 aaKnown RBP17.33■□□□□ 0.36
CSNK1E-210ENST00000442216 NEK4P51957 841 aa17.33■□□□□ 0.36
CSNK1E-210ENST00000442216 PDE4DQ08499 809 aa17.33■□□□□ 0.36
CSNK1E-210ENST00000442216 CCDC144BQ3MJ40 725 aa17.33■□□□□ 0.36
CSNK1E-210ENST00000442216 IQSEC1Q6DN90 963 aa17.33■□□□□ 0.36
CSNK1E-210ENST00000442216 PPP1R18Q6NYC8 613 aa17.33■□□□□ 0.36
CSNK1E-210ENST00000442216 CUL5Q93034 780 aa17.33■□□□□ 0.36
CSNK1E-210ENST00000442216 RNF26Q9BY78 433 aaPredicted RBP17.33■□□□□ 0.36
CSNK1E-210ENST00000442216 MNX1P50219 401 aaPredicted RBP17.32■□□□□ 0.36
CSNK1E-210ENST00000442216 AK2P54819 239 aa17.32■□□□□ 0.36
CSNK1E-210ENST00000442216 CCT2P78371 535 aaKnown RBP17.32■□□□□ 0.36
CSNK1E-210ENST00000442216 PFKFB3Q16875 520 aaPredicted RBP17.32■□□□□ 0.36
CSNK1E-210ENST00000442216 ARHGEF16Q5VV41 709 aa17.32■□□□□ 0.36
CSNK1E-210ENST00000442216 TAPT1Q6NXT6 567 aa17.32■□□□□ 0.36
CSNK1E-210ENST00000442216 CPLX2Q6PUV4 134 aaKnown RBP17.32■□□□□ 0.36
CSNK1E-210ENST00000442216 NECAB2Q7Z6G3 386 aa17.32■□□□□ 0.36
CSNK1E-210ENST00000442216 GLT8D2Q9H1C3 349 aa17.32■□□□□ 0.36
CSNK1E-210ENST00000442216 PSTPIP2Q9H939 334 aa17.32■□□□□ 0.36
CSNK1E-210ENST00000442216 PXMP2Q9NR77 195 aa17.32■□□□□ 0.36
CSNK1E-210ENST00000442216 BARHL2Q9NY43 387 aa17.32■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 102.8 ms