RNA–Protein interactions for RNA: ENST00000442029.5

PTPRN-206, Transcript of protein tyrosine phosphatase, receptor type N, humanhuman

TSL 4

Gene PTPRN, Length 541 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRN-206ENST00000442029 DYNC1LI2O43237 492 aaPredicted RBP16.88■□□□□ 0.29
PTPRN-206ENST00000442029 SMPD1P17405 629 aa16.88■□□□□ 0.29
PTPRN-206ENST00000442029 RPS6P62753 249 aaKnown RBP16.88■□□□□ 0.29
PTPRN-206ENST00000442029 PDE4DQ08499 809 aa16.88■□□□□ 0.29
PTPRN-206ENST00000442029 ANKRD33Q7Z3H0 272 aa16.88■□□□□ 0.29
PTPRN-206ENST00000442029 DEFB123Q8N688 67 aa16.88■□□□□ 0.29
PTPRN-206ENST00000442029 CLEC4DQ8WXI8 215 aa16.88■□□□□ 0.29
PTPRN-206ENST00000442029 PDGFCQ9NRA1 345 aa16.88■□□□□ 0.29
PTPRN-206ENST00000442029 GNEQ9Y223 722 aaKnown RBP16.88■□□□□ 0.29
PTPRN-206ENST00000442029 ERICH2A1L162 156 aa16.87■□□□□ 0.29
PTPRN-206ENST00000442029 ARVCFO00192 962 aa16.87■□□□□ 0.29
PTPRN-206ENST00000442029 CABYRO75952 493 aa16.87■□□□□ 0.29
PTPRN-206ENST00000442029 FAAP100Q0VG06 881 aa16.87■□□□□ 0.29
PTPRN-206ENST00000442029 FSCN1Q16658 493 aaKnown RBP16.87■□□□□ 0.29
PTPRN-206ENST00000442029 TAPT1Q6NXT6 567 aa16.87■□□□□ 0.29
PTPRN-206ENST00000442029 RALYLQ86SE5 291 aaKnown RBP16.87■□□□□ 0.29
PTPRN-206ENST00000442029 ADGRF4Q8IZF3 695 aa16.87■□□□□ 0.29
PTPRN-206ENST00000442029 DNERQ8NFT8 737 aa16.87■□□□□ 0.29
PTPRN-206ENST00000442029 MORC4Q8TE76 937 aa16.87■□□□□ 0.29
PTPRN-206ENST00000442029 VAT1LQ9HCJ6 419 aa16.87■□□□□ 0.29
PTPRN-206ENST00000442029 Q9Y3F1 56 aa16.87■□□□□ 0.29
PTPRN-206ENST00000442029 ABCB11O95342 1321 aa16.87■□□□□ 0.29
PTPRN-206ENST00000442029 NKX3-2P78367 333 aa16.86■□□□□ 0.29
PTPRN-206ENST00000442029 FPGSQ05932 587 aa16.86■□□□□ 0.29
PTPRN-206ENST00000442029 SHHQ15465 462 aa16.86■□□□□ 0.29
PTPRN-206ENST00000442029 CXCL17Q6UXB2 119 aa16.86■□□□□ 0.29
PTPRN-206ENST00000442029 WDR11Q9BZH6 1224 aa16.86■□□□□ 0.29
PTPRN-206ENST00000442029 CTAGE5O15320 804 aa16.85■□□□□ 0.29
PTPRN-206ENST00000442029 CYP21A2P08686 494 aa16.85■□□□□ 0.29
PTPRN-206ENST00000442029 PTH1RQ03431 593 aa16.85■□□□□ 0.29
PTPRN-206ENST00000442029 SART3Q15020 963 aaKnown RBP16.85■□□□□ 0.29
PTPRN-206ENST00000442029 DUSP28Q4G0W2 176 aa16.85■□□□□ 0.29
PTPRN-206ENST00000442029 C9orf50Q5SZB4 431 aa16.85■□□□□ 0.29
PTPRN-206ENST00000442029 Q7L0L9 218 aa16.85■□□□□ 0.29
PTPRN-206ENST00000442029 FBXO11Q86XK2 927 aa16.85■□□□□ 0.29
PTPRN-206ENST00000442029 MCF2L2Q86YR7 1114 aa16.85■□□□□ 0.29
PTPRN-206ENST00000442029 RGS22Q8NE09 1264 aa16.85■□□□□ 0.29
PTPRN-206ENST00000442029 NCOA7Q8NI08 942 aa16.85■□□□□ 0.29
PTPRN-206ENST00000442029 IFIT3O14879 490 aaKnown RBP16.84■□□□□ 0.29
PTPRN-206ENST00000442029 SGSM2O43147 1006 aa16.84■□□□□ 0.29
PTPRN-206ENST00000442029 ITGB8P26012 769 aa16.84■□□□□ 0.29
PTPRN-206ENST00000442029 CDK7P50613 346 aa16.84■□□□□ 0.29
PTPRN-206ENST00000442029 PPP2R5BQ15173 497 aa16.84■□□□□ 0.29
PTPRN-206ENST00000442029 SEC23AQ15436 765 aa16.84■□□□□ 0.29
PTPRN-206ENST00000442029 QRICH1Q2TAL8 776 aa16.84■□□□□ 0.29
PTPRN-206ENST00000442029 BRDTQ58F21 947 aaPredicted RBP16.84■□□□□ 0.29
PTPRN-206ENST00000442029 CYB5R4Q7L1T6 521 aa16.84■□□□□ 0.29
PTPRN-206ENST00000442029 MAF1Q9H063 256 aa16.84■□□□□ 0.29
PTPRN-206ENST00000442029 MRPL11Q9Y3B7 192 aaKnown RBP16.84■□□□□ 0.29
PTPRN-206ENST00000442029 KLRF2D3W0D1 207 aa16.83■□□□□ 0.28
PTPRN-206ENST00000442029 NKRFO15226 690 aaKnown RBP eCLIP16.83■□□□□ 0.28
PTPRN-206ENST00000442029 TIMP1P01033 207 aa16.83■□□□□ 0.28
PTPRN-206ENST00000442029 PTGS1P23219 599 aa16.83■□□□□ 0.28
PTPRN-206ENST00000442029 CPT1AP50416 773 aa16.83■□□□□ 0.28
PTPRN-206ENST00000442029 ITGA7Q13683 1181 aa16.83■□□□□ 0.28
PTPRN-206ENST00000442029 WTAPQ15007 396 aa16.83■□□□□ 0.28
PTPRN-206ENST00000442029 FAM126BQ8IXS8 530 aa16.83■□□□□ 0.28
PTPRN-206ENST00000442029 OR6J1Q8NGC5 347 aa16.83■□□□□ 0.28
PTPRN-206ENST00000442029 SCFD2Q8WU76 684 aa16.83■□□□□ 0.28
PTPRN-206ENST00000442029 RNPC3Q96LT9 517 aaKnown RBP16.83■□□□□ 0.28
PTPRN-206ENST00000442029 AMNQ9BXJ7 453 aa16.83■□□□□ 0.28
PTPRN-206ENST00000442029 SEZ6LQ9BYH1 1024 aa16.83■□□□□ 0.28
PTPRN-206ENST00000442029 JMJD4Q9H9V9 463 aa16.83■□□□□ 0.28
PTPRN-206ENST00000442029 GPHNQ9NQX3 736 aaPredicted RBP16.83■□□□□ 0.28
PTPRN-206ENST00000442029 POLR3EQ9NVU0 708 aa16.83■□□□□ 0.28
PTPRN-206ENST00000442029 TBX21Q9UL17 535 aa16.83■□□□□ 0.28
PTPRN-206ENST00000442029 SCN10AQ9Y5Y9 1956 aa16.82■□□□□ 0.28
PTPRN-206ENST00000442029 RBM47A0AV96 593 aaKnown RBP16.82■□□□□ 0.28
PTPRN-206ENST00000442029 E7EWF7 191 aa16.82■□□□□ 0.28
PTPRN-206ENST00000442029 PPIGQ13427 754 aaKnown RBP eCLIP16.82■□□□□ 0.28
PTPRN-206ENST00000442029 TTLL4Q14679 1199 aa16.82■□□□□ 0.28
PTPRN-206ENST00000442029 TMEM63BQ5T3F8 832 aa16.82■□□□□ 0.28
PTPRN-206ENST00000442029 ZNF697Q5TEC3 545 aa16.82■□□□□ 0.28
PTPRN-206ENST00000442029 STAG2Q8N3U4 1231 aa16.82■□□□□ 0.28
PTPRN-206ENST00000442029 TMEM199Q8N511 208 aa16.82■□□□□ 0.28
PTPRN-206ENST00000442029 PPP1R12CQ9BZL4 782 aa16.82■□□□□ 0.28
PTPRN-206ENST00000442029 TRIP12Q14669 1992 aaPredicted RBP16.81■□□□□ 0.28
PTPRN-206ENST00000442029 MYL3P08590 195 aa16.81■□□□□ 0.28
PTPRN-206ENST00000442029 EDNRBP24530 442 aa16.81■□□□□ 0.28
PTPRN-206ENST00000442029 MFSD5Q6N075 450 aa16.81■□□□□ 0.28
PTPRN-206ENST00000442029 NSUN6Q8TEA1 469 aaKnown RBP16.81■□□□□ 0.28
PTPRN-206ENST00000442029 CFBP00751 764 aa16.8■□□□□ 0.28
PTPRN-206ENST00000442029 TXNP10599 105 aaKnown RBP16.8■□□□□ 0.28
PTPRN-206ENST00000442029 TRAF1Q13077 416 aa16.8■□□□□ 0.28
PTPRN-206ENST00000442029 GRM4Q14833 912 aa16.8■□□□□ 0.28
PTPRN-206ENST00000442029 TMEM67Q5HYA8 995 aa16.8■□□□□ 0.28
PTPRN-206ENST00000442029 ARHGEF16Q5VV41 709 aa16.8■□□□□ 0.28
PTPRN-206ENST00000442029 FAM109BQ6ICB4 259 aaPredicted RBP16.8■□□□□ 0.28
PTPRN-206ENST00000442029 CHST3Q7LGC8 479 aa16.8■□□□□ 0.28
PTPRN-206ENST00000442029 CATIPQ7Z7H3 387 aa16.8■□□□□ 0.28
PTPRN-206ENST00000442029 HOMER1Q86YM7 354 aa16.8■□□□□ 0.28
PTPRN-206ENST00000442029 SYTL5Q8TDW5 730 aaPredicted RBP16.8■□□□□ 0.28
PTPRN-206ENST00000442029 TBC1D5Q92609 795 aa16.8■□□□□ 0.28
PTPRN-206ENST00000442029 MAP4K1Q92918 833 aa16.8■□□□□ 0.28
PTPRN-206ENST00000442029 TAAR1Q96RJ0 339 aa16.8■□□□□ 0.28
PTPRN-206ENST00000442029 RMDN3Q96TC7 470 aa16.8■□□□□ 0.28
PTPRN-206ENST00000442029 MTMR10Q9NXD2 777 aa16.8■□□□□ 0.28
PTPRN-206ENST00000442029 MAD2L2Q9UI95 211 aa16.8■□□□□ 0.28
PTPRN-206ENST00000442029 RBM8AQ9Y5S9 174 aaKnown RBP16.8■□□□□ 0.28
PTPRN-206ENST00000442029 GBF1Q92538 1859 aa16.8■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms