RNA–Protein interactions for RNA: ENST00000441580.5

CPSF4-206, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 2 BASIC

Gene CPSF4, Length 942 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-206ENST00000441580 KBTBD4Q9NVX7 518 aa14.84□□□□□ -0.03
CPSF4-206ENST00000441580 PRR12Q9ULL5 1215 aa14.84□□□□□ -0.03
CPSF4-206ENST00000441580 NFE2L3Q9Y4A8 694 aa14.84□□□□□ -0.03
CPSF4-206ENST00000441580 SPDYE3A6NKU9 549 aa14.83□□□□□ -0.04
CPSF4-206ENST00000441580 PP2D1A8MPX8 630 aa14.83□□□□□ -0.04
CPSF4-206ENST00000441580 PIK3CDO00329 1044 aa14.83□□□□□ -0.04
CPSF4-206ENST00000441580 ZNF18P17022 549 aa14.83□□□□□ -0.04
CPSF4-206ENST00000441580 PTGER2P43116 358 aa14.83□□□□□ -0.04
CPSF4-206ENST00000441580 GMPSP49915 693 aaPredicted RBP14.83□□□□□ -0.04
CPSF4-206ENST00000441580 RASSF7Q02833 373 aa14.83□□□□□ -0.04
CPSF4-206ENST00000441580 STIM1Q13586 685 aa14.83□□□□□ -0.04
CPSF4-206ENST00000441580 CUL4BQ13620 913 aa14.83□□□□□ -0.04
CPSF4-206ENST00000441580 PDIA5Q14554 519 aa14.83□□□□□ -0.04
CPSF4-206ENST00000441580 KIF4BQ2VIQ3 1234 aa14.83□□□□□ -0.04
CPSF4-206ENST00000441580 NBPF9Q3BBW0 867 aa14.83□□□□□ -0.04
CPSF4-206ENST00000441580 NAALADL2Q58DX5 795 aa14.83□□□□□ -0.04
CPSF4-206ENST00000441580 ZNF658Q5TYW1 1059 aaPredicted RBP14.83□□□□□ -0.04
CPSF4-206ENST00000441580 SPATA1Q5VX52 437 aa14.83□□□□□ -0.04
CPSF4-206ENST00000441580 DCAF15Q66K64 600 aa14.83□□□□□ -0.04
CPSF4-206ENST00000441580 APOBEC3FQ8IUX4 373 aaKnown RBP14.83□□□□□ -0.04
CPSF4-206ENST00000441580 LPAR1Q92633 364 aa14.83□□□□□ -0.04
CPSF4-206ENST00000441580 MBOAT7Q96N66 472 aa14.83□□□□□ -0.04
CPSF4-206ENST00000441580 FEZ1Q99689 392 aa14.83□□□□□ -0.04
CPSF4-206ENST00000441580 LRRC27Q9C0I9 530 aa14.83□□□□□ -0.04
CPSF4-206ENST00000441580 RANBP17Q9H2T7 1088 aaKnown RBP14.83□□□□□ -0.04
CPSF4-206ENST00000441580 LRWD1Q9UFC0 647 aa14.83□□□□□ -0.04
CPSF4-206ENST00000441580 FEM1BQ9UK73 627 aa14.83□□□□□ -0.04
CPSF4-206ENST00000441580 STK24Q9Y6E0 443 aa14.83□□□□□ -0.04
CPSF4-206ENST00000441580 CYP3A7-CYP3A51PA0A087WV96 503 aa14.82□□□□□ -0.04
CPSF4-206ENST00000441580 TBX3O15119 743 aa14.82□□□□□ -0.04
CPSF4-206ENST00000441580 CYP3A7P24462 503 aa14.82□□□□□ -0.04
CPSF4-206ENST00000441580 SREBF1P36956 1147 aa14.82□□□□□ -0.04
CPSF4-206ENST00000441580 ECE1P42892 770 aa14.82□□□□□ -0.04
CPSF4-206ENST00000441580 FMR1Q06787 632 aaKnown RBP eCLIP14.82□□□□□ -0.04
CPSF4-206ENST00000441580 SPAG1Q07617 926 aa14.82□□□□□ -0.04
CPSF4-206ENST00000441580 PAK1Q13153 545 aa14.82□□□□□ -0.04
CPSF4-206ENST00000441580 RASA3Q14644 834 aa14.82□□□□□ -0.04
CPSF4-206ENST00000441580 FAM83BQ5T0W9 1011 aa14.82□□□□□ -0.04
CPSF4-206ENST00000441580 KRT79Q5XKE5 535 aa14.82□□□□□ -0.04
CPSF4-206ENST00000441580 SLFN12Q8IYM2 578 aa14.82□□□□□ -0.04
CPSF4-206ENST00000441580 SPTLC3Q9NUV7 552 aa14.82□□□□□ -0.04
CPSF4-206ENST00000441580 RWDD2AQ9UIY3 292 aa14.82□□□□□ -0.04
CPSF4-206ENST00000441580 PNMA2Q9UL42 364 aa14.82□□□□□ -0.04
CPSF4-206ENST00000441580 ABCB11O95342 1321 aa14.82□□□□□ -0.04
CPSF4-206ENST00000441580 WDR46O15213 610 aaKnown RBP14.81□□□□□ -0.04
CPSF4-206ENST00000441580 MARCH6O60337 910 aa14.81□□□□□ -0.04
CPSF4-206ENST00000441580 OFD1O75665 1012 aa14.81□□□□□ -0.04
CPSF4-206ENST00000441580 ATP1A3P13637 1013 aa14.81□□□□□ -0.04
CPSF4-206ENST00000441580 TECP42680 631 aa14.81□□□□□ -0.04
CPSF4-206ENST00000441580 TXKP42681 527 aa14.81□□□□□ -0.04
CPSF4-206ENST00000441580 UBASH3AP57075 661 aa14.81□□□□□ -0.04
CPSF4-206ENST00000441580 USH1GQ495M9 461 aa14.81□□□□□ -0.04
CPSF4-206ENST00000441580 TMEM119Q4V9L6 283 aa14.81□□□□□ -0.04
CPSF4-206ENST00000441580 TMC6Q7Z403 805 aa14.81□□□□□ -0.04
CPSF4-206ENST00000441580 KIAA1524Q8TCG1 905 aa14.81□□□□□ -0.04
CPSF4-206ENST00000441580 ACER1Q8TDN7 264 aa14.81□□□□□ -0.04
CPSF4-206ENST00000441580 SNX29Q8TEQ0 813 aa14.81□□□□□ -0.04
CPSF4-206ENST00000441580 CTAGE1Q96RT6 745 aa14.81□□□□□ -0.04
CPSF4-206ENST00000441580 MTRQ99707 1265 aa14.81□□□□□ -0.04
CPSF4-206ENST00000441580 BLZF1Q9H2G9 400 aa14.81□□□□□ -0.04
CPSF4-206ENST00000441580 FANCLQ9NW38 375 aa14.81□□□□□ -0.04
CPSF4-206ENST00000441580 CTNND2Q9UQB3 1225 aa14.81□□□□□ -0.04
CPSF4-206ENST00000441580 PPP2R3BQ9Y5P8 575 aa14.81□□□□□ -0.04
CPSF4-206ENST00000441580 USP17L15C9J2P7 530 aa14.8□□□□□ -0.04
CPSF4-206ENST00000441580 USP17L13C9JLJ4 530 aa14.8□□□□□ -0.04
CPSF4-206ENST00000441580 USP17L11C9JVI0 530 aa14.8□□□□□ -0.04
CPSF4-206ENST00000441580 USP17L18D6R9N7 530 aa14.8□□□□□ -0.04
CPSF4-206ENST00000441580 USP17L22D6RA61 530 aa14.8□□□□□ -0.04
CPSF4-206ENST00000441580 USP17L17D6RBQ6 530 aa14.8□□□□□ -0.04
CPSF4-206ENST00000441580 USP17L19D6RCP7 530 aa14.8□□□□□ -0.04
CPSF4-206ENST00000441580 USP17L20D6RJB6 530 aa14.8□□□□□ -0.04
CPSF4-206ENST00000441580 MEIS2O14770 477 aa14.8□□□□□ -0.04
CPSF4-206ENST00000441580 CTNND1O60716 968 aaKnown RBP14.8□□□□□ -0.04
CPSF4-206ENST00000441580 RHOBTB3O94955 611 aa14.8□□□□□ -0.04
CPSF4-206ENST00000441580 CDC25AP30304 524 aa14.8□□□□□ -0.04
CPSF4-206ENST00000441580 ARHGAP4P98171 946 aa14.8□□□□□ -0.04
CPSF4-206ENST00000441580 USP17L24Q0WX57 530 aa14.8□□□□□ -0.04
CPSF4-206ENST00000441580 CCDC144BQ3MJ40 725 aa14.8□□□□□ -0.04
CPSF4-206ENST00000441580 HAUS3Q68CZ6 603 aa14.8□□□□□ -0.04
CPSF4-206ENST00000441580 USP17L6PQ6QN14 398 aa14.8□□□□□ -0.04
CPSF4-206ENST00000441580 CDAN1Q8IWY9 1227 aa14.8□□□□□ -0.04
CPSF4-206ENST00000441580 TRMT44Q8IYL2 757 aaKnown RBP14.8□□□□□ -0.04
CPSF4-206ENST00000441580 SPICE1Q8N0Z3 855 aa14.8□□□□□ -0.04
CPSF4-206ENST00000441580 CCDC112Q8NEF3 446 aa14.8□□□□□ -0.04
CPSF4-206ENST00000441580 ANKRD20A12PQ8NF67 263 aa14.8□□□□□ -0.04
CPSF4-206ENST00000441580 CRYGNQ8WXF5 182 aa14.8□□□□□ -0.04
CPSF4-206ENST00000441580 TEPSINQ96N21 525 aa14.8□□□□□ -0.04
CPSF4-206ENST00000441580 ZNF830Q96NB3 372 aaPredicted RBP14.8□□□□□ -0.04
CPSF4-206ENST00000441580 C7orf25Q9BPX7 421 aa14.8□□□□□ -0.04
CPSF4-206ENST00000441580 NT5C3AQ9H0P0 336 aa14.8□□□□□ -0.04
CPSF4-206ENST00000441580 KCNMB3Q9NPA1 279 aa14.8□□□□□ -0.04
CPSF4-206ENST00000441580 EXOC1Q9NV70 894 aa14.8□□□□□ -0.04
CPSF4-206ENST00000441580 MRPL11Q9Y3B7 192 aaKnown RBP14.8□□□□□ -0.04
CPSF4-206ENST00000441580 ZNF541Q9H0D2 1346 aa14.8□□□□□ -0.04
CPSF4-206ENST00000441580 PPP1R3GB7ZBB8 358 aa14.79□□□□□ -0.04
CPSF4-206ENST00000441580 PSMA7O14818 248 aa14.79□□□□□ -0.04
CPSF4-206ENST00000441580 CDK11BP21127 795 aaKnown RBP14.79□□□□□ -0.04
CPSF4-206ENST00000441580 SFPQP23246 707 aaKnown RBP eCLIP14.79□□□□□ -0.04
CPSF4-206ENST00000441580 CASP1P29466 404 aa14.79□□□□□ -0.04
CPSF4-206ENST00000441580 CIITAP33076 1130 aa14.79□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms