RNA–Protein interactions for RNA: ENST00000440760.5

SNX17-203, Transcript of sorting nexin 17, humanhuman

TSL 1 (best)

Gene SNX17, Length 1,955 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-203ENST00000440760 PDILTQ8N807 584 aa21.68■■□□□ 1.06
SNX17-203ENST00000440760 FUCA2Q9BTY2 467 aa21.68■■□□□ 1.06
SNX17-203ENST00000440760 SLC38A10Q9HBR0 1119 aa21.68■■□□□ 1.06
SNX17-203ENST00000440760 FAM13BQ9NYF5 915 aa21.68■■□□□ 1.06
SNX17-203ENST00000440760 TMOD4Q9NZQ9 345 aa21.68■■□□□ 1.06
SNX17-203ENST00000440760 LOC285556D6RIA3 1793 aa21.68■■□□□ 1.06
SNX17-203ENST00000440760 RBBP6Q7Z6E9 1792 aaKnown RBP21.68■■□□□ 1.06
SNX17-203ENST00000440760 ANKRD13AQ8IZ07 590 aa21.68■■□□□ 1.06
SNX17-203ENST00000440760 RBSNQ9H1K0 784 aa21.68■■□□□ 1.06
SNX17-203ENST00000440760 A0A087X0B3 334 aa21.67■■□□□ 1.06
SNX17-203ENST00000440760 ZNF526Q8TF50 670 aaPredicted RBP21.67■■□□□ 1.06
SNX17-203ENST00000440760 GRPEL1Q9HAV7 217 aa21.67■■□□□ 1.06
SNX17-203ENST00000440760 HOMER2Q9NSB8 354 aa21.67■■□□□ 1.06
SNX17-203ENST00000440760 ABCB11O95342 1321 aa21.67■■□□□ 1.06
SNX17-203ENST00000440760 IRF6O14896 467 aa21.67■■□□□ 1.06
SNX17-203ENST00000440760 OR52Z1P0C646 297 aa21.67■■□□□ 1.06
SNX17-203ENST00000440760 AP3B2Q13367 1082 aa21.67■■□□□ 1.06
SNX17-203ENST00000440760 ARL6IP4Q66PJ3 421 aaKnown RBP21.67■■□□□ 1.06
SNX17-203ENST00000440760 FCHSD1Q86WN1 690 aa21.67■■□□□ 1.06
SNX17-203ENST00000440760 SDF4Q9BRK5 362 aa21.67■■□□□ 1.06
SNX17-203ENST00000440760 A0A087WWV3 80 aa21.66■■□□□ 1.06
SNX17-203ENST00000440760 SPDYE3A6NKU9 549 aa21.66■■□□□ 1.06
SNX17-203ENST00000440760 POLR2DO15514 142 aaKnown RBP21.66■■□□□ 1.06
SNX17-203ENST00000440760 CDC25AP30304 524 aa21.66■■□□□ 1.06
SNX17-203ENST00000440760 LONRF3Q496Y0 759 aa21.66■■□□□ 1.06
SNX17-203ENST00000440760 TREML2Q5T2D2 321 aa21.66■■□□□ 1.06
SNX17-203ENST00000440760 RNF214Q8ND24 703 aa21.66■■□□□ 1.06
SNX17-203ENST00000440760 MRPL11Q9Y3B7 192 aaKnown RBP21.66■■□□□ 1.06
SNX17-203ENST00000440760 PP2D1A8MPX8 630 aa21.65■■□□□ 1.06
SNX17-203ENST00000440760 VWA5AO00534 786 aa21.65■■□□□ 1.06
SNX17-203ENST00000440760 NFIBO00712 420 aa21.65■■□□□ 1.06
SNX17-203ENST00000440760 ALAS1P13196 640 aa21.65■■□□□ 1.06
SNX17-203ENST00000440760 TRAF1Q13077 416 aa21.65■■□□□ 1.06
SNX17-203ENST00000440760 SH3D19Q5HYK7 790 aa21.65■■□□□ 1.06
SNX17-203ENST00000440760 DTHD1Q6ZMT9 781 aa21.65■■□□□ 1.06
SNX17-203ENST00000440760 NMRK2Q9NPI5 230 aa21.65■■□□□ 1.06
SNX17-203ENST00000440760 RBM46Q8TBY0 533 aaKnown RBP21.65■■□□□ 1.06
SNX17-203ENST00000440760 UIMC1Q96RL1 719 aa21.65■■□□□ 1.06
SNX17-203ENST00000440760 CTDP1Q9Y5B0 961 aaPredicted RBP21.65■■□□□ 1.06
SNX17-203ENST00000440760 SPDYE5A6NIY4 337 aa21.64■■□□□ 1.05
SNX17-203ENST00000440760 PIK3CDO00329 1044 aa21.64■■□□□ 1.05
SNX17-203ENST00000440760 ARHGAP4P98171 946 aa21.64■■□□□ 1.05
SNX17-203ENST00000440760 TYRO3Q06418 890 aa21.64■■□□□ 1.05
SNX17-203ENST00000440760 CALCRLQ16602 461 aa21.64■■□□□ 1.05
SNX17-203ENST00000440760 CATSPERGQ6ZRH7 1159 aa21.64■■□□□ 1.05
SNX17-203ENST00000440760 ARMC9Q7Z3E5 817 aa21.64■■□□□ 1.05
SNX17-203ENST00000440760 ERO1BQ86YB8 467 aa21.64■■□□□ 1.05
SNX17-203ENST00000440760 GJA10Q969M2 543 aa21.64■■□□□ 1.05
SNX17-203ENST00000440760 DDX25Q9UHL0 483 aaKnown RBP21.64■■□□□ 1.05
SNX17-203ENST00000440760 GCOM1H8Y6P7 765 aaPredicted RBP21.63■■□□□ 1.05
SNX17-203ENST00000440760 LAD1O00515 517 aa21.63■■□□□ 1.05
SNX17-203ENST00000440760 CTAGE5O15320 804 aa21.63■■□□□ 1.05
SNX17-203ENST00000440760 FOXN1O15353 648 aa21.63■■□□□ 1.05
SNX17-203ENST00000440760 ZBED4O75132 1171 aa21.63■■□□□ 1.05
SNX17-203ENST00000440760 POLR2MP0CAP2 368 aa21.63■■□□□ 1.05
SNX17-203ENST00000440760 DSG3P32926 999 aa21.63■■□□□ 1.05
SNX17-203ENST00000440760 MUM1L1Q5H9M0 696 aa21.63■■□□□ 1.05
SNX17-203ENST00000440760 KRBA2Q6ZNG9 492 aa21.63■■□□□ 1.05
SNX17-203ENST00000440760 GADL1Q6ZQY3 521 aa21.63■■□□□ 1.05
SNX17-203ENST00000440760 CRYGNQ8WXF5 182 aa21.63■■□□□ 1.05
SNX17-203ENST00000440760 CLEC4DQ8WXI8 215 aa21.63■■□□□ 1.05
SNX17-203ENST00000440760 SERTAD1Q9UHV2 236 aa21.63■■□□□ 1.05
SNX17-203ENST00000440760 CCDC192P0DO97 292 aa21.63■■□□□ 1.05
SNX17-203ENST00000440760 LONP1P36776 959 aaKnown RBP21.63■■□□□ 1.05
SNX17-203ENST00000440760 PRPHP41219 470 aa21.63■■□□□ 1.05
SNX17-203ENST00000440760 PPATQ06203 517 aa21.63■■□□□ 1.05
SNX17-203ENST00000440760 ORC2Q13416 577 aaPredicted RBP21.63■■□□□ 1.05
SNX17-203ENST00000440760 CNNM3Q8NE01 707 aa21.63■■□□□ 1.05
SNX17-203ENST00000440760 DHX58Q96C10 678 aa21.63■■□□□ 1.05
SNX17-203ENST00000440760 OPTNQ96CV9 577 aa21.63■■□□□ 1.05
SNX17-203ENST00000440760 SREBF1P36956 1147 aa21.62■■□□□ 1.05
SNX17-203ENST00000440760 UBXN2AP68543 259 aa21.62■■□□□ 1.05
SNX17-203ENST00000440760 PPP4R3AQ6IN85 833 aa21.62■■□□□ 1.05
SNX17-203ENST00000440760 GRAMD1CQ8IYS0 662 aa21.62■■□□□ 1.05
SNX17-203ENST00000440760 REPS2Q8NFH8 660 aa21.62■■□□□ 1.05
SNX17-203ENST00000440760 TIGD1Q96MW7 591 aa21.62■■□□□ 1.05
SNX17-203ENST00000440760 MTMR9Q96QG7 549 aa21.62■■□□□ 1.05
SNX17-203ENST00000440760 SPDYE16A6NNV3 312 aaPredicted RBP21.61■■□□□ 1.05
SNX17-203ENST00000440760 ACTN4O43707 911 aaKnown RBP21.61■■□□□ 1.05
SNX17-203ENST00000440760 FOSP01100 380 aaPredicted RBP21.61■■□□□ 1.05
SNX17-203ENST00000440760 XRCC6P12956 609 aaKnown RBP eCLIP21.61■■□□□ 1.05
SNX17-203ENST00000440760 TXKP42681 527 aa21.61■■□□□ 1.05
SNX17-203ENST00000440760 MRE11P49959 708 aa21.61■■□□□ 1.05
SNX17-203ENST00000440760 PNOCQ13519 176 aa21.61■■□□□ 1.05
SNX17-203ENST00000440760 COG2Q14746 738 aa21.61■■□□□ 1.05
SNX17-203ENST00000440760 A0A0G2JLL6 359 aaPredicted RBP21.61■■□□□ 1.05
SNX17-203ENST00000440760 TECP42680 631 aa21.61■■□□□ 1.05
SNX17-203ENST00000440760 SASS6Q6UVJ0 657 aa21.61■■□□□ 1.05
SNX17-203ENST00000440760 PRRT2Q7Z6L0 340 aaPredicted RBP21.61■■□□□ 1.05
SNX17-203ENST00000440760 COL20A1Q9P218 1284 aa21.61■■□□□ 1.05
SNX17-203ENST00000440760 RIPK3Q9Y572 518 aa21.61■■□□□ 1.05
SNX17-203ENST00000440760 A0A0G2JMZ2 1700 aa21.6■■□□□ 1.05
SNX17-203ENST00000440760 PEX10O60683 326 aa21.6■■□□□ 1.05
SNX17-203ENST00000440760 GCFC2P16383 781 aaKnown RBP21.6■■□□□ 1.05
SNX17-203ENST00000440760 GJA5P36382 358 aa21.6■■□□□ 1.05
SNX17-203ENST00000440760 L1TD1Q5T7N2 865 aaKnown RBP21.6■■□□□ 1.05
SNX17-203ENST00000440760 PRR29P0C7W0 189 aa21.59■■□□□ 1.05
SNX17-203ENST00000440760 PPIL2Q13356 520 aa21.59■■□□□ 1.05
SNX17-203ENST00000440760 TMEM132BQ14DG7 1078 aa21.59■■□□□ 1.05
SNX17-203ENST00000440760 KARSQ15046 597 aaKnown RBP21.59■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms