RNA–Protein interactions for RNA: ENST00000440514.1

CPSF4-205, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 3

Gene CPSF4, Length 578 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-205ENST00000440514 DDX20Q9UHI6 824 aaKnown RBP20.9■□□□□ 0.94
CPSF4-205ENST00000440514 NID2Q14112 1375 aa20.89■□□□□ 0.93
CPSF4-205ENST00000440514 TFRCP02786 760 aaKnown RBP20.89■□□□□ 0.93
CPSF4-205ENST00000440514 SMARCA1P28370 1054 aa20.89■□□□□ 0.93
CPSF4-205ENST00000440514 CDC27P30260 824 aa20.89■□□□□ 0.93
CPSF4-205ENST00000440514 METAP2P50579 478 aaKnown RBP eCLIP20.89■□□□□ 0.93
CPSF4-205ENST00000440514 RCAN1P53805 252 aa20.89■□□□□ 0.93
CPSF4-205ENST00000440514 ANO1Q5XXA6 986 aa20.89■□□□□ 0.93
CPSF4-205ENST00000440514 LHX8Q68G74 356 aa20.89■□□□□ 0.93
CPSF4-205ENST00000440514 FAM217BQ9NTX9 383 aaPredicted RBP20.89■□□□□ 0.93
CPSF4-205ENST00000440514 SEC63Q9UGP8 760 aaKnown RBP20.89■□□□□ 0.93
CPSF4-205ENST00000440514 ZHX1Q9UKY1 873 aaPredicted RBP20.89■□□□□ 0.93
CPSF4-205ENST00000440514 CNPY2Q9Y2B0 182 aa20.89■□□□□ 0.93
CPSF4-205ENST00000440514 ZNF865P0CJ78 1059 aaPredicted RBP20.88■□□□□ 0.93
CPSF4-205ENST00000440514 ALDH5A1P51649 535 aaPredicted RBP20.88■□□□□ 0.93
CPSF4-205ENST00000440514 LENG1Q96BZ8 264 aaPredicted RBP20.88■□□□□ 0.93
CPSF4-205ENST00000440514 LARP6Q9BRS8 491 aaKnown RBP20.88■□□□□ 0.93
CPSF4-205ENST00000440514 PDRG1Q9NUG6 133 aa20.88■□□□□ 0.93
CPSF4-205ENST00000440514 COL20A1Q9P218 1284 aa20.88■□□□□ 0.93
CPSF4-205ENST00000440514 NRBP1Q9UHY1 535 aa20.88■□□□□ 0.93
CPSF4-205ENST00000440514 SEPT4O43236 478 aa20.87■□□□□ 0.93
CPSF4-205ENST00000440514 CFBP00751 764 aa20.87■□□□□ 0.93
CPSF4-205ENST00000440514 FUT2Q10981 343 aa20.87■□□□□ 0.93
CPSF4-205ENST00000440514 MCF2L2Q86YR7 1114 aa20.87■□□□□ 0.93
CPSF4-205ENST00000440514 RGS22Q8NE09 1264 aa20.87■□□□□ 0.93
CPSF4-205ENST00000440514 SYTL5Q8TDW5 730 aaPredicted RBP20.87■□□□□ 0.93
CPSF4-205ENST00000440514 IL17RAQ96F46 866 aa20.87■□□□□ 0.93
CPSF4-205ENST00000440514 ASB14A6NK59 587 aa20.86■□□□□ 0.93
CPSF4-205ENST00000440514 FARP2O94887 1054 aaPredicted RBP20.86■□□□□ 0.93
CPSF4-205ENST00000440514 TRAF1Q13077 416 aa20.86■□□□□ 0.93
CPSF4-205ENST00000440514 DIS3LQ8TF46 1054 aaKnown RBP20.86■□□□□ 0.93
CPSF4-205ENST00000440514 KATNBL1Q9H079 304 aa20.86■□□□□ 0.93
CPSF4-205ENST00000440514 ADD3Q9UEY8 706 aaKnown RBP20.86■□□□□ 0.93
CPSF4-205ENST00000440514 OGDHLQ9ULD0 1010 aa20.86■□□□□ 0.93
CPSF4-205ENST00000440514 MSCO60682 206 aa20.85■□□□□ 0.93
CPSF4-205ENST00000440514 PDIA3P30101 505 aaKnown RBP20.85■□□□□ 0.93
CPSF4-205ENST00000440514 ADD1P35611 737 aaKnown RBP20.85■□□□□ 0.93
CPSF4-205ENST00000440514 HSD17B4P51659 736 aa20.85■□□□□ 0.93
CPSF4-205ENST00000440514 EVCP57679 992 aa20.85■□□□□ 0.93
CPSF4-205ENST00000440514 MLLT1Q03111 559 aaPredicted RBP20.85■□□□□ 0.93
CPSF4-205ENST00000440514 ACVR2BQ13705 512 aa20.85■□□□□ 0.93
CPSF4-205ENST00000440514 EEPD1Q7L9B9 569 aa20.85■□□□□ 0.93
CPSF4-205ENST00000440514 FBXO16Q8IX29 292 aaPredicted RBP20.85■□□□□ 0.93
CPSF4-205ENST00000440514 GPKOWQ92917 476 aaPredicted RBP eCLIP20.85■□□□□ 0.93
CPSF4-205ENST00000440514 AKR1A1P14550 325 aa20.84■□□□□ 0.93
CPSF4-205ENST00000440514 HOXA13P31271 388 aaPredicted RBP20.84■□□□□ 0.93
CPSF4-205ENST00000440514 CCT2P78371 535 aaKnown RBP20.84■□□□□ 0.93
CPSF4-205ENST00000440514 GHRHRQ02643 423 aa20.84■□□□□ 0.93
CPSF4-205ENST00000440514 HEATR3Q7Z4Q2 680 aa20.84■□□□□ 0.93
CPSF4-205ENST00000440514 UBE2Q1Q7Z7E8 422 aa20.84■□□□□ 0.93
CPSF4-205ENST00000440514 MORC4Q8TE76 937 aa20.84■□□□□ 0.93
CPSF4-205ENST00000440514 TAAR1Q96RJ0 339 aa20.84■□□□□ 0.93
CPSF4-205ENST00000440514 ABHD16BQ9H3Z7 469 aa20.84■□□□□ 0.93
CPSF4-205ENST00000440514 NCOA5Q9HCD5 579 aaKnown RBP20.84■□□□□ 0.93
CPSF4-205ENST00000440514 ADCY6O43306 1168 aa20.83■□□□□ 0.93
CPSF4-205ENST00000440514 MNX1P50219 401 aaPredicted RBP20.83■□□□□ 0.93
CPSF4-205ENST00000440514 DNERQ8NFT8 737 aa20.83■□□□□ 0.93
CPSF4-205ENST00000440514 MAF1Q9H063 256 aa20.83■□□□□ 0.93
CPSF4-205ENST00000440514 CCDC196A0A1B0GTZ2 297 aa20.82■□□□□ 0.92
CPSF4-205ENST00000440514 EDNRBP24530 442 aa20.82■□□□□ 0.92
CPSF4-205ENST00000440514 AK2P54819 239 aa20.82■□□□□ 0.92
CPSF4-205ENST00000440514 STK3Q13188 491 aa20.82■□□□□ 0.92
CPSF4-205ENST00000440514 CCDC144BQ3MJ40 725 aa20.82■□□□□ 0.92
CPSF4-205ENST00000440514 WWC2Q6AWC2 1192 aa20.82■□□□□ 0.92
CPSF4-205ENST00000440514 ANKLE1Q8NAG6 615 aa20.82■□□□□ 0.92
CPSF4-205ENST00000440514 FAM184BQ9ULE4 1060 aa20.82■□□□□ 0.92
CPSF4-205ENST00000440514 V9GY48 417 aaPredicted RBP20.82■□□□□ 0.92
CPSF4-205ENST00000440514 C11orf97A0A1B0GVM6 126 aaPredicted RBP20.81■□□□□ 0.92
CPSF4-205ENST00000440514 GCOM1H8Y6P7 765 aaPredicted RBP20.81■□□□□ 0.92
CPSF4-205ENST00000440514 PPFIA3O75145 1194 aa20.81■□□□□ 0.92
CPSF4-205ENST00000440514 POLR2MP0CAP2 368 aa20.81■□□□□ 0.92
CPSF4-205ENST00000440514 RARBP10826 455 aa20.81■□□□□ 0.92
CPSF4-205ENST00000440514 EIF2AK2P19525 551 aaKnown RBP20.81■□□□□ 0.92
CPSF4-205ENST00000440514 PDE4DQ08499 809 aa20.81■□□□□ 0.92
CPSF4-205ENST00000440514 PPP2R5BQ15173 497 aa20.81■□□□□ 0.92
CPSF4-205ENST00000440514 NOL8Q76FK4 1167 aaKnown RBP20.81■□□□□ 0.92
CPSF4-205ENST00000440514 PAWRQ96IZ0 340 aaKnown RBP20.81■□□□□ 0.92
CPSF4-205ENST00000440514 RMDN3Q96TC7 470 aa20.81■□□□□ 0.92
CPSF4-205ENST00000440514 VTA1Q9NP79 307 aa20.81■□□□□ 0.92
CPSF4-205ENST00000440514 XPNPEP3Q9NQH7 507 aa20.81■□□□□ 0.92
CPSF4-205ENST00000440514 PDGFCQ9NRA1 345 aa20.81■□□□□ 0.92
CPSF4-205ENST00000440514 LOC102724159A0A0B4J2E5 919 aa20.8■□□□□ 0.92
CPSF4-205ENST00000440514 MYCNP04198 464 aaPredicted RBP20.8■□□□□ 0.92
CPSF4-205ENST00000440514 CAPN2P17655 700 aa20.8■□□□□ 0.92
CPSF4-205ENST00000440514 ADCYAP1R1P41586 468 aa20.8■□□□□ 0.92
CPSF4-205ENST00000440514 PWP2Q15269 919 aaKnown RBP20.8■□□□□ 0.92
CPSF4-205ENST00000440514 GJC2Q5T442 439 aaPredicted RBP20.8■□□□□ 0.92
CPSF4-205ENST00000440514 TYW1BQ6NUM6 668 aa20.8■□□□□ 0.92
CPSF4-205ENST00000440514 FCHSD1Q86WN1 690 aa20.8■□□□□ 0.92
CPSF4-205ENST00000440514 NSUN6Q8TEA1 469 aaKnown RBP20.8■□□□□ 0.92
CPSF4-205ENST00000440514 PHKBQ93100 1093 aa20.8■□□□□ 0.92
CPSF4-205ENST00000440514 ZNF274Q96GC6 653 aaPredicted RBP20.8■□□□□ 0.92
CPSF4-205ENST00000440514 PXMP2Q9NR77 195 aa20.8■□□□□ 0.92
CPSF4-205ENST00000440514 TPCN1Q9ULQ1 816 aa20.8■□□□□ 0.92
CPSF4-205ENST00000440514 SYNRGQ9UMZ2 1314 aa20.79■□□□□ 0.92
CPSF4-205ENST00000440514 PGK1P00558 417 aa20.79■□□□□ 0.92
CPSF4-205ENST00000440514 PTGS1P23219 599 aa20.79■□□□□ 0.92
CPSF4-205ENST00000440514 NEK4P51957 841 aa20.79■□□□□ 0.92
CPSF4-205ENST00000440514 NTRK3Q16288 839 aa20.79■□□□□ 0.92
CPSF4-205ENST00000440514 ARHGEF16Q5VV41 709 aa20.79■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms