RNA–Protein interactions for RNA: ENST00000440437.1

COL16A1-204, Transcript of collagen type XVI alpha 1 chain, humanhuman

TSL 5

Gene COL16A1, Length 672 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1-204ENST00000440437 Q9Y3F1 56 aa19.69■□□□□ 0.74
COL16A1-204ENST00000440437 EDNRBP24530 442 aa19.68■□□□□ 0.74
COL16A1-204ENST00000440437 CHMLP26374 656 aa19.68■□□□□ 0.74
COL16A1-204ENST00000440437 EPHB4P54760 987 aa19.68■□□□□ 0.74
COL16A1-204ENST00000440437 RPS6P62753 249 aaKnown RBP19.68■□□□□ 0.74
COL16A1-204ENST00000440437 CDC37Q16543 378 aaPredicted RBP19.68■□□□□ 0.74
COL16A1-204ENST00000440437 FSCN1Q16658 493 aaKnown RBP19.68■□□□□ 0.74
COL16A1-204ENST00000440437 ASPRV1Q53RT3 343 aa19.68■□□□□ 0.74
COL16A1-204ENST00000440437 FAM109BQ6ICB4 259 aaPredicted RBP19.68■□□□□ 0.74
COL16A1-204ENST00000440437 NOL8Q76FK4 1167 aaKnown RBP19.68■□□□□ 0.74
COL16A1-204ENST00000440437 FAM126BQ8IXS8 530 aa19.68■□□□□ 0.74
COL16A1-204ENST00000440437 SLC43A3Q8NBI5 491 aa19.68■□□□□ 0.74
COL16A1-204ENST00000440437 RBM47A0AV96 593 aaKnown RBP19.67■□□□□ 0.74
COL16A1-204ENST00000440437 DYNC1LI2O43237 492 aaPredicted RBP19.67■□□□□ 0.74
COL16A1-204ENST00000440437 CALML3P27482 149 aa19.67■□□□□ 0.74
COL16A1-204ENST00000440437 SEC23AQ15436 765 aa19.67■□□□□ 0.74
COL16A1-204ENST00000440437 USH1GQ495M9 461 aa19.67■□□□□ 0.74
COL16A1-204ENST00000440437 DUSP28Q4G0W2 176 aa19.67■□□□□ 0.74
COL16A1-204ENST00000440437 CXCL17Q6UXB2 119 aa19.67■□□□□ 0.74
COL16A1-204ENST00000440437 KIAA1211Q6ZU35 1233 aa19.67■□□□□ 0.74
COL16A1-204ENST00000440437 ADGRF4Q8IZF3 695 aa19.67■□□□□ 0.74
COL16A1-204ENST00000440437 DNERQ8NFT8 737 aa19.67■□□□□ 0.74
COL16A1-204ENST00000440437 AP5M1Q9H0R1 490 aa19.67■□□□□ 0.74
COL16A1-204ENST00000440437 CABYRO75952 493 aa19.66■□□□□ 0.74
COL16A1-204ENST00000440437 TIMP1P01033 207 aa19.66■□□□□ 0.74
COL16A1-204ENST00000440437 PTH1RQ03431 593 aa19.66■□□□□ 0.74
COL16A1-204ENST00000440437 FPGSQ05932 587 aa19.66■□□□□ 0.74
COL16A1-204ENST00000440437 CYB5R4Q7L1T6 521 aa19.66■□□□□ 0.74
COL16A1-204ENST00000440437 RGS22Q8NE09 1264 aa19.66■□□□□ 0.74
COL16A1-204ENST00000440437 RUFY2Q8WXA3 655 aa19.66■□□□□ 0.74
COL16A1-204ENST00000440437 VTI1AQ96AJ9 217 aa19.66■□□□□ 0.74
COL16A1-204ENST00000440437 UBAC1Q9BSL1 405 aa19.66■□□□□ 0.74
COL16A1-204ENST00000440437 SCN10AQ9Y5Y9 1956 aa19.65■□□□□ 0.74
COL16A1-204ENST00000440437 CD4P01730 458 aa19.65■□□□□ 0.74
COL16A1-204ENST00000440437 CYP21A2P08686 494 aa19.65■□□□□ 0.74
COL16A1-204ENST00000440437 PARP1P09874 1014 aaKnown RBP19.65■□□□□ 0.74
COL16A1-204ENST00000440437 IFIT1BQ5T764 474 aaKnown RBP19.65■□□□□ 0.74
COL16A1-204ENST00000440437 MAF1Q9H063 256 aa19.65■□□□□ 0.74
COL16A1-204ENST00000440437 GRIN2DO15399 1336 aa19.65■□□□□ 0.74
COL16A1-204ENST00000440437 ABCB11O95342 1321 aa19.65■□□□□ 0.74
COL16A1-204ENST00000440437 ZEB2O60315 1214 aa19.64■□□□□ 0.73
COL16A1-204ENST00000440437 QRICH1Q2TAL8 776 aa19.64■□□□□ 0.73
COL16A1-204ENST00000440437 MFSD5Q6N075 450 aa19.64■□□□□ 0.73
COL16A1-204ENST00000440437 WDR11Q9BZH6 1224 aa19.64■□□□□ 0.73
COL16A1-204ENST00000440437 JMJD4Q9H9V9 463 aa19.64■□□□□ 0.73
COL16A1-204ENST00000440437 STXBP5LQ9Y2K9 1186 aa19.64■□□□□ 0.73
COL16A1-204ENST00000440437 TLR3O15455 904 aaKnown RBP19.63■□□□□ 0.73
COL16A1-204ENST00000440437 SGSM2O43147 1006 aa19.63■□□□□ 0.73
COL16A1-204ENST00000440437 SMAD3P84022 425 aaKnown RBP19.63■□□□□ 0.73
COL16A1-204ENST00000440437 PDE4DQ08499 809 aa19.63■□□□□ 0.73
COL16A1-204ENST00000440437 ITGA7Q13683 1181 aa19.63■□□□□ 0.73
COL16A1-204ENST00000440437 STAG2Q8N3U4 1231 aa19.63■□□□□ 0.73
COL16A1-204ENST00000440437 TBC1D5Q92609 795 aa19.63■□□□□ 0.73
COL16A1-204ENST00000440437 RNPC3Q96LT9 517 aaKnown RBP19.63■□□□□ 0.73
COL16A1-204ENST00000440437 GUCD1Q96NT3 240 aa19.63■□□□□ 0.73
COL16A1-204ENST00000440437 MPHOSPH6Q99547 160 aaKnown RBP19.63■□□□□ 0.73
COL16A1-204ENST00000440437 TAF6LQ9Y6J9 622 aa19.63■□□□□ 0.73
COL16A1-204ENST00000440437 SEZ6LQ9BYH1 1024 aa19.62■□□□□ 0.73
COL16A1-204ENST00000440437 COL20A1Q9P218 1284 aa19.62■□□□□ 0.73
COL16A1-204ENST00000440437 MAD2L2Q9UI95 211 aa19.62■□□□□ 0.73
COL16A1-204ENST00000440437 U3KPZ7 1027 aaPredicted RBP19.62■□□□□ 0.73
COL16A1-204ENST00000440437 NKRFO15226 690 aaKnown RBP eCLIP19.61■□□□□ 0.73
COL16A1-204ENST00000440437 TRDNQ13061 729 aa19.61■□□□□ 0.73
COL16A1-204ENST00000440437 PPP2R5BQ15173 497 aa19.61■□□□□ 0.73
COL16A1-204ENST00000440437 ZNF697Q5TEC3 545 aa19.61■□□□□ 0.73
COL16A1-204ENST00000440437 FBXO11Q86XK2 927 aa19.61■□□□□ 0.73
COL16A1-204ENST00000440437 SYTL5Q8TDW5 730 aaPredicted RBP19.61■□□□□ 0.73
COL16A1-204ENST00000440437 SCFD2Q8WU76 684 aa19.61■□□□□ 0.73
COL16A1-204ENST00000440437 MTMR8Q96EF0 704 aa19.61■□□□□ 0.73
COL16A1-204ENST00000440437 BUD13Q9BRD0 619 aaKnown RBP eCLIP19.61■□□□□ 0.732e-6■■■■■ 41.5
COL16A1-204ENST00000440437 PPP1R12CQ9BZL4 782 aa19.61■□□□□ 0.73
COL16A1-204ENST00000440437 DHX16O60231 1041 aaKnown RBP19.6■□□□□ 0.73
COL16A1-204ENST00000440437 CPT1AP50416 773 aa19.6■□□□□ 0.73
COL16A1-204ENST00000440437 PSMC6P62333 389 aa19.6■□□□□ 0.73
COL16A1-204ENST00000440437 PURAQ00577 322 aaKnown RBP19.6■□□□□ 0.73
COL16A1-204ENST00000440437 PPIGQ13427 754 aaKnown RBP eCLIP19.6■□□□□ 0.732e-7■■■■■ 37.3
COL16A1-204ENST00000440437 STOX1Q6ZVD7 989 aa19.6■□□□□ 0.73
COL16A1-204ENST00000440437 OR6J1Q8NGC5 347 aa19.6■□□□□ 0.73
COL16A1-204ENST00000440437 TAAR1Q96RJ0 339 aa19.6■□□□□ 0.73
COL16A1-204ENST00000440437 POLR3EQ9NVU0 708 aa19.6■□□□□ 0.73
COL16A1-204ENST00000440437 MRPL11Q9Y3B7 192 aaKnown RBP19.6■□□□□ 0.73
COL16A1-204ENST00000440437 GBF1Q92538 1859 aa19.6■□□□□ 0.73
COL16A1-204ENST00000440437 TANC1Q9C0D5 1861 aa19.6■□□□□ 0.73
COL16A1-204ENST00000440437 BAZ2BQ9UIF8 2168 aaKnown RBP19.59■□□□□ 0.73
COL16A1-204ENST00000440437 PALM3A6NDB9 673 aaPredicted RBP19.59■□□□□ 0.73
COL16A1-204ENST00000440437 B4DLN1 442 aa19.59■□□□□ 0.73
COL16A1-204ENST00000440437 KLRF2D3W0D1 207 aa19.59■□□□□ 0.73
COL16A1-204ENST00000440437 E7EWF7 191 aa19.59■□□□□ 0.73
COL16A1-204ENST00000440437 OPLAHO14841 1288 aa19.59■□□□□ 0.73
COL16A1-204ENST00000440437 B4GALT4O60513 344 aa19.59■□□□□ 0.73
COL16A1-204ENST00000440437 ARIH2O95376 493 aa19.59■□□□□ 0.73
COL16A1-204ENST00000440437 CSF2RAP15509 400 aa19.59■□□□□ 0.73
COL16A1-204ENST00000440437 MRPL12P52815 198 aaKnown RBP19.59■□□□□ 0.73
COL16A1-204ENST00000440437 GHRHRQ02643 423 aa19.59■□□□□ 0.73
COL16A1-204ENST00000440437 SLC35G1Q2M3R5 365 aa19.59■□□□□ 0.73
COL16A1-204ENST00000440437 C16orf59Q7L2K0 433 aa19.59■□□□□ 0.73
COL16A1-204ENST00000440437 MCF2L2Q86YR7 1114 aa19.59■□□□□ 0.73
COL16A1-204ENST00000440437 TMEM199Q8N511 208 aa19.59■□□□□ 0.73
COL16A1-204ENST00000440437 COPS5Q92905 334 aa19.59■□□□□ 0.73
COL16A1-204ENST00000440437 MAP4K1Q92918 833 aa19.59■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 135 ms