RNA–Protein interactions for RNA: ENST00000440400.1

ACTN4-204, Transcript of actinin alpha 4, humanhuman

TSL 5

Gene ACTN4, Length 3,180 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4-204ENST00000440400 QRICH1Q2TAL8 776 aa14.88□□□□□ -0.03
ACTN4-204ENST00000440400 KCTD1Q719H9 257 aa14.88□□□□□ -0.03
ACTN4-204ENST00000440400 HOMER1Q86YM7 354 aa14.88□□□□□ -0.03
ACTN4-204ENST00000440400 COA7Q96BR5 231 aa14.88□□□□□ -0.03
ACTN4-204ENST00000440400 MED15Q96RN5 788 aa14.88□□□□□ -0.03
ACTN4-204ENST00000440400 DEFB129Q9H1M3 183 aa14.88□□□□□ -0.03
ACTN4-204ENST00000440400 KBTBD4Q9NVX7 518 aa14.88□□□□□ -0.03
ACTN4-204ENST00000440400 IMPACTQ9P2X3 320 aa14.88□□□□□ -0.03
ACTN4-204ENST00000440400 ZBTB21Q9ULJ3 1066 aa14.88□□□□□ -0.03
ACTN4-204ENST00000440400 ZBTB12Q9Y330 459 aaPredicted RBP14.88□□□□□ -0.03
ACTN4-204ENST00000440400 PIK3CDO00329 1044 aa14.87□□□□□ -0.03
ACTN4-204ENST00000440400 NEMFO60524 1076 aa14.87□□□□□ -0.03
ACTN4-204ENST00000440400 GCFC2P16383 781 aaKnown RBP14.87□□□□□ -0.03
ACTN4-204ENST00000440400 TNNT3P45378 269 aaPredicted RBP14.87□□□□□ -0.03
ACTN4-204ENST00000440400 DHX58Q96C10 678 aa14.87□□□□□ -0.03
ACTN4-204ENST00000440400 KCND1Q9NSA2 647 aa14.87□□□□□ -0.03
ACTN4-204ENST00000440400 TMEM260Q9NX78 707 aa14.87□□□□□ -0.03
ACTN4-204ENST00000440400 WDR90Q96KV7 1748 aa14.87□□□□□ -0.03
ACTN4-204ENST00000440400 SLC1A4P43007 532 aa14.87□□□□□ -0.03
ACTN4-204ENST00000440400 AP3B2Q13367 1082 aa14.87□□□□□ -0.03
ACTN4-204ENST00000440400 COBLL1Q53SF7 1204 aa14.87□□□□□ -0.03
ACTN4-204ENST00000440400 CALCOCO1Q9P1Z2 691 aa14.87□□□□□ -0.03
ACTN4-204ENST00000440400 BECN2A8MW95 431 aa14.87□□□□□ -0.03
ACTN4-204ENST00000440400 GDF11O95390 407 aa14.87□□□□□ -0.03
ACTN4-204ENST00000440400 PDIA5Q14554 519 aa14.87□□□□□ -0.03
ACTN4-204ENST00000440400 KCNB1Q14721 858 aa14.87□□□□□ -0.03
ACTN4-204ENST00000440400 CDC37Q16543 378 aaPredicted RBP14.87□□□□□ -0.03
ACTN4-204ENST00000440400 ZSCAN29Q8IWY8 852 aaPredicted RBP14.87□□□□□ -0.03
ACTN4-204ENST00000440400 KIF18AQ8NI77 898 aa14.87□□□□□ -0.03
ACTN4-204ENST00000440400 TCP10L2B9ZVM9 353 aa14.86□□□□□ -0.03
ACTN4-204ENST00000440400 MRPL12P52815 198 aaKnown RBP14.86□□□□□ -0.03
ACTN4-204ENST00000440400 SLC20A2Q08357 652 aa14.86□□□□□ -0.03
ACTN4-204ENST00000440400 SYDE2Q5VT97 1194 aa14.86□□□□□ -0.03
ACTN4-204ENST00000440400 GRAMD1CQ8IYS0 662 aa14.86□□□□□ -0.03
ACTN4-204ENST00000440400 MMTAG2Q9BU76 263 aaKnown RBP14.86□□□□□ -0.03
ACTN4-204ENST00000440400 BIN1O00499 593 aa14.86□□□□□ -0.03
ACTN4-204ENST00000440400 CAP2P40123 477 aa14.86□□□□□ -0.03
ACTN4-204ENST00000440400 ZRSR1Q15695 479 aaKnown RBP14.86□□□□□ -0.03
ACTN4-204ENST00000440400 CCDC96Q2M329 555 aa14.86□□□□□ -0.03
ACTN4-204ENST00000440400 HYIQ5T013 277 aa14.86□□□□□ -0.03
ACTN4-204ENST00000440400 CNPY4Q8N129 248 aa14.86□□□□□ -0.03
ACTN4-204ENST00000440400 LRRC15Q8TF66 581 aa14.86□□□□□ -0.03
ACTN4-204ENST00000440400 ZNF592Q92610 1267 aa14.86□□□□□ -0.03
ACTN4-204ENST00000440400 TRIM5Q9C035 493 aa14.86□□□□□ -0.03
ACTN4-204ENST00000440400 RANBP17Q9H2T7 1088 aaKnown RBP14.86□□□□□ -0.03
ACTN4-204ENST00000440400 VAT1LQ9HCJ6 419 aa14.86□□□□□ -0.03
ACTN4-204ENST00000440400 BIN2Q9UBW5 565 aaPredicted RBP14.86□□□□□ -0.03
ACTN4-204ENST00000440400 RLFQ13129 1914 aa14.85□□□□□ -0.03
ACTN4-204ENST00000440400 PPP1R3GB7ZBB8 358 aa14.85□□□□□ -0.03
ACTN4-204ENST00000440400 TULP2O00295 520 aa14.85□□□□□ -0.03
ACTN4-204ENST00000440400 MEIS2O14770 477 aa14.85□□□□□ -0.03
ACTN4-204ENST00000440400 BMP3P12645 472 aa14.85□□□□□ -0.03
ACTN4-204ENST00000440400 HOXA7P31268 230 aaPredicted RBP14.85□□□□□ -0.03
ACTN4-204ENST00000440400 USP11P51784 963 aa14.85□□□□□ -0.03
ACTN4-204ENST00000440400 KIAA1755Q5JYT7 1200 aa14.85□□□□□ -0.03
ACTN4-204ENST00000440400 KRT222Q8N1A0 295 aa14.85□□□□□ -0.03
ACTN4-204ENST00000440400 ARHGEF10LQ9HCE6 1279 aa14.85□□□□□ -0.03
ACTN4-204ENST00000440400 MTMR7Q9Y216 660 aa14.85□□□□□ -0.03
ACTN4-204ENST00000440400 CCNT1O60563 726 aaKnown RBP14.85□□□□□ -0.03
ACTN4-204ENST00000440400 SLC16A2P36021 539 aa14.85□□□□□ -0.03
ACTN4-204ENST00000440400 TXLNAP40222 546 aa14.85□□□□□ -0.03
ACTN4-204ENST00000440400 TPM4P67936 248 aa14.85□□□□□ -0.03
ACTN4-204ENST00000440400 GHRHRQ02643 423 aa14.85□□□□□ -0.03
ACTN4-204ENST00000440400 CLRN2A0PK11 232 aa14.85□□□□□ -0.03
ACTN4-204ENST00000440400 OPLAHO14841 1288 aa14.85□□□□□ -0.03
ACTN4-204ENST00000440400 HNRNPH2P55795 449 aaKnown RBP14.85□□□□□ -0.03
ACTN4-204ENST00000440400 DHX8Q14562 1220 aaKnown RBP14.85□□□□□ -0.03
ACTN4-204ENST00000440400 FEZ2Q9UHY8 353 aaPredicted RBP14.85□□□□□ -0.03
ACTN4-204ENST00000440400 KLRC4O43908 158 aa14.84□□□□□ -0.03
ACTN4-204ENST00000440400 FMR1Q06787 632 aaKnown RBP eCLIP14.84□□□□□ -0.034e-7■■■■■ 26.9
ACTN4-204ENST00000440400 POTEDQ86YR6 584 aa14.84□□□□□ -0.03
ACTN4-204ENST00000440400 PSTPIP2Q9H939 334 aa14.84□□□□□ -0.03
ACTN4-204ENST00000440400 GOPCQ9HD26 462 aa14.84□□□□□ -0.03
ACTN4-204ENST00000440400 KCNMB3Q9NPA1 279 aa14.84□□□□□ -0.03
ACTN4-204ENST00000440400 SLC37A4O43826 429 aa14.84□□□□□ -0.03
ACTN4-204ENST00000440400 CCDC144BQ3MJ40 725 aa14.84□□□□□ -0.03
ACTN4-204ENST00000440400 TMEM119Q4V9L6 283 aa14.84□□□□□ -0.03
ACTN4-204ENST00000440400 AMNQ9BXJ7 453 aa14.84□□□□□ -0.03
ACTN4-204ENST00000440400 LETM2Q2VYF4 491 aa14.83□□□□□ -0.03
ACTN4-204ENST00000440400 Q4G0T1 1027 aa14.83□□□□□ -0.03
ACTN4-204ENST00000440400 CDKAL1Q5VV42 579 aa14.83□□□□□ -0.03
ACTN4-204ENST00000440400 JAKMIP3Q5VZ66 844 aa14.83□□□□□ -0.03
ACTN4-204ENST00000440400 JDP2Q8WYK2 163 aa14.83□□□□□ -0.03
ACTN4-204ENST00000440400 C7orf25Q9BPX7 421 aa14.83□□□□□ -0.03
ACTN4-204ENST00000440400 TMEM39BQ9GZU3 492 aa14.83□□□□□ -0.03
ACTN4-204ENST00000440400 VCPKMTQ9H867 229 aa14.83□□□□□ -0.03
ACTN4-204ENST00000440400 CYP3A4P08684 503 aa14.83□□□□□ -0.04
ACTN4-204ENST00000440400 CD44P16070 742 aaKnown RBP14.83□□□□□ -0.04
ACTN4-204ENST00000440400 CIITAP33076 1130 aa14.83□□□□□ -0.04
ACTN4-204ENST00000440400 TRAF1Q13077 416 aa14.83□□□□□ -0.04
ACTN4-204ENST00000440400 NBPF9Q3BBW0 867 aa14.83□□□□□ -0.04
ACTN4-204ENST00000440400 APTXQ7Z2E3 356 aaKnown RBP14.83□□□□□ -0.04
ACTN4-204ENST00000440400 PDILTQ8N807 584 aa14.83□□□□□ -0.04
ACTN4-204ENST00000440400 HAS1Q92839 578 aa14.83□□□□□ -0.04
ACTN4-204ENST00000440400 RMND1Q9NWS8 449 aa14.83□□□□□ -0.04
ACTN4-204ENST00000440400 TNNI2P48788 182 aa14.83□□□□□ -0.04
ACTN4-204ENST00000440400 FANCCQ00597 558 aa14.83□□□□□ -0.04
ACTN4-204ENST00000440400 ZNF658Q5TYW1 1059 aaPredicted RBP14.83□□□□□ -0.04
ACTN4-204ENST00000440400 SH2D4AQ9H788 454 aa14.83□□□□□ -0.04
ACTN4-204ENST00000440400 ZNF112Q9UJU3 913 aa14.83□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms